gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 159 |
| AcsI | RAATTY | 1 cut(s) | 90 |
| AfaI | GTAC | 1 cut(s) | 360 |
| AgsI | TTSAA | 4 cut(s) | 44, 88, 97, 235 |
| AluBI | AGCT | 3 cut(s) | 59, 160, 191 |
| AluI | AGCT | 3 cut(s) | 59, 160, 191 |
| AlwI | GGATC | 1 cut(s) | 159 |
| ApoI | RAATTY | 1 cut(s) | 90 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 39 |
| AspS9I | GGNCC | 1 cut(s) | 276 |
| AvaII | GGWCC | 1 cut(s) | 276 |
| BccI | CCATC | 1 cut(s) | 70 |
| BfaI | CTAG | 1 cut(s) | 170 |
| Bme18I | GGWCC | 1 cut(s) | 276 |
| BmgT120I | GGNCC | 1 cut(s) | 276 |
| BpuEI | CTTGAG | 1 cut(s) | 41 |
| Bse3DI | GCAATG | 1 cut(s) | 255 |
| BseGI | GGATG | 1 cut(s) | 119 |
| BseMI | GCAATG | 1 cut(s) | 255 |
| BseMII | CTCAG | 1 cut(s) | 51 |
| Bsp143I | GATC | 2 cut(s) | 164, 286 |
| BspCNI | CTCAG | 1 cut(s) | 52 |
| BspPI | GGATC | 1 cut(s) | 159 |
| BsrDI | GCAATG | 1 cut(s) | 255 |
| BssMI | GATC | 2 cut(s) | 164, 286 |
| BstDEI | CTNAG | 2 cut(s) | 60, 161 |
| BstF5I | GGATG | 1 cut(s) | 119 |
| BstKTI | GATC | 2 cut(s) | 167, 289 |
| BstMBI | GATC | 2 cut(s) | 164, 286 |
| BstX2I | RGATCY | 1 cut(s) | 164 |
| BstYI | RGATCY | 1 cut(s) | 164 |
| BtsCI | GGATG | 1 cut(s) | 119 |
| Cfr13I | GGNCC | 1 cut(s) | 276 |
| Csp6I | GTAC | 1 cut(s) | 359 |
| CviAII | CATG | 3 cut(s) | 280, 347, 362 |
| CviJI | RGCY | 5 cut(s) | 14, 59, 160, 191, 379 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 59, 160, 191, 379 |
| CviQI | GTAC | 1 cut(s) | 359 |
| DdeI | CTNAG | 2 cut(s) | 60, 161 |
| DpnI | GATC | 2 cut(s) | 166, 288 |
| DpnII | GATC | 2 cut(s) | 164, 286 |
| Eco47I | GGWCC | 1 cut(s) | 276 |
| FaeI | CATG | 3 cut(s) | 283, 350, 365 |
| FatI | CATG | 3 cut(s) | 279, 346, 361 |
| FauNDI | CATATG | 1 cut(s) | 388 |
| FokI | GGATG | 1 cut(s) | 126 |
| FspBI | CTAG | 1 cut(s) | 170 |
| Hin1II | CATG | 3 cut(s) | 283, 350, 365 |
| HinfI | GANTC | 1 cut(s) | 47 |
| Hpy166II | GTNNAC | 2 cut(s) | 127, 276 |
| Hpy188III | TCNNGA | 1 cut(s) | 44 |
| Hpy8I | GTNNAC | 2 cut(s) | 127, 276 |
| HpyAV | CCTTC | 2 cut(s) | 104, 328 |
| HpyCH4V | TGCA | 3 cut(s) | 8, 209, 307 |
| HpyF3I | CTNAG | 2 cut(s) | 60, 161 |
| Hsp92II | CATG | 3 cut(s) | 283, 350, 365 |
| Kzo9I | GATC | 2 cut(s) | 164, 286 |
| LpnPI | CCDG | 1 cut(s) | 106 |
| MaeI | CTAG | 1 cut(s) | 170 |
| MalI | GATC | 2 cut(s) | 166, 288 |
| MboI | GATC | 2 cut(s) | 164, 286 |
| MboII | GAAGA | 1 cut(s) | 280 |
| MfeI | CAATTG | 1 cut(s) | 83 |
| MflI | RGATCY | 1 cut(s) | 164 |
| MluCI | AATT | 3 cut(s) | 27, 83, 90 |
| MmeI | TCCRAC | 1 cut(s) | 130 |
| MnlI | CCTC | 1 cut(s) | 16 |
| MroXI | GAANNNNTTC | 1 cut(s) | 39 |
| MslI | CAYNNNNRTG | 1 cut(s) | 351 |
| MunI | CAATTG | 1 cut(s) | 83 |
| NdeI | CATATG | 1 cut(s) | 388 |
| NdeII | GATC | 2 cut(s) | 164, 286 |
| NlaIII | CATG | 3 cut(s) | 283, 350, 365 |
| PdmI | GAANNNNTTC | 1 cut(s) | 39 |
| PfeI | GAWTC | 1 cut(s) | 47 |
| PspPI | GGNCC | 1 cut(s) | 276 |
| PsuI | RGATCY | 1 cut(s) | 164 |
| RsaI | GTAC | 1 cut(s) | 360 |
| RsaNI | GTAC | 1 cut(s) | 359 |
| RseI | CAYNNNNRTG | 1 cut(s) | 351 |
| Sau3AI | GATC | 2 cut(s) | 164, 286 |
| Sau96I | GGNCC | 1 cut(s) | 276 |
| SetI | ASST | 4 cut(s) | 61, 162, 193, 298 |
| SinI | GGWCC | 1 cut(s) | 276 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 351 |
| SmlI | CTYRAG | 1 cut(s) | 20 |
| SmoI | CTYRAG | 1 cut(s) | 20 |
| Sse9I | AATT | 3 cut(s) | 27, 83, 90 |
| SspMI | CTAG | 1 cut(s) | 170 |
| TaqI | TCGA | 1 cut(s) | 144 |
| TasI | AATT | 3 cut(s) | 27, 83, 90 |
| TfiI | GAWTC | 1 cut(s) | 47 |
| TspDTI | ATGAA | 2 cut(s) | 201, 296 |
| VpaK11BI | GGWCC | 1 cut(s) | 276 |
| XapI | RAATTY | 1 cut(s) | 90 |
| XmnI | GAANNNNTTC | 1 cut(s) | 39 |
| XspI | CTAG | 1 cut(s) | 170 |