gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 446 |
| AfaI | GTAC | 2 cut(s) | 133, 324 |
| AgsI | TTSAA | 5 cut(s) | 59, 143, 286, 361, 548 |
| AluBI | AGCT | 5 cut(s) | 41, 153, 251, 385, 572 |
| AluI | AGCT | 5 cut(s) | 41, 153, 251, 385, 572 |
| Alw26I | GTCTC | 2 cut(s) | 348, 681 |
| AlwI | GGATC | 1 cut(s) | 446 |
| AoxI | GGCC | 1 cut(s) | 492 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 597 |
| AsuC2I | CCSGG | 1 cut(s) | 562 |
| AsuHPI | GGTGA | 1 cut(s) | 452 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 306, 339 |
| BbvCI | CCTCAGC | 1 cut(s) | 105 |
| BclI | TGATCA | 2 cut(s) | 3, 624 |
| BcnI | CCSGG | 1 cut(s) | 562 |
| BcoDI | GTCTC | 2 cut(s) | 348, 681 |
| BfaI | CTAG | 1 cut(s) | 602 |
| BmcAI | AGTACT | 1 cut(s) | 133 |
| Bme1390I | CCNGG | 1 cut(s) | 562 |
| BmrFI | CCNGG | 1 cut(s) | 562 |
| BmsI | GCATC | 3 cut(s) | 317, 491, 520 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 517, 549 |
| Bpu10I | CCTNAGC | 1 cut(s) | 105 |
| BpuMI | CCSGG | 1 cut(s) | 562 |
| BsaJI | CCNNGG | 1 cut(s) | 436 |
| Bse3DI | GCAATG | 1 cut(s) | 480 |
| BseDI | CCNNGG | 1 cut(s) | 436 |
| BseGI | GGATG | 3 cut(s) | 289, 506, 712 |
| BseMI | GCAATG | 1 cut(s) | 480 |
| BseMII | CTCAG | 1 cut(s) | 119 |
| BsgI | GTGCAG | 1 cut(s) | 120 |
| BshFI | GGCC | 1 cut(s) | 494 |
| BsiSI | CCGG | 1 cut(s) | 562 |
| BsmAI | GTCTC | 2 cut(s) | 348, 681 |
| BsmI | GAATGC | 1 cut(s) | 78 |
| BsnI | GGCC | 1 cut(s) | 494 |
| Bsp143I | GATC | 4 cut(s) | 3, 203, 451, 624 |
| BspANI | GGCC | 1 cut(s) | 494 |
| BspCNI | CTCAG | 1 cut(s) | 118 |
| BspPI | GGATC | 1 cut(s) | 446 |
| BsrDI | GCAATG | 1 cut(s) | 480 |
| BssECI | CCNNGG | 1 cut(s) | 436 |
| BssMI | GATC | 4 cut(s) | 3, 203, 451, 624 |
| BssT1I | CCWWGG | 1 cut(s) | 436 |
| Bst4CI | ACNGT | 3 cut(s) | 131, 342, 717 |
| BstC8I | GCNNGC | 1 cut(s) | 387 |
| BstDEI | CTNAG | 3 cut(s) | 105, 232, 486 |
| BstF5I | GGATG | 3 cut(s) | 289, 506, 712 |
| BstKTI | GATC | 4 cut(s) | 6, 206, 454, 627 |
| BstMAI | GTCTC | 2 cut(s) | 348, 681 |
| BstMBI | GATC | 4 cut(s) | 3, 203, 451, 624 |
| BstSCI | CCNGG | 1 cut(s) | 560 |
| BsuRI | GGCC | 1 cut(s) | 494 |
| BtsCI | GGATG | 3 cut(s) | 289, 506, 712 |
| BtsI | GCAGTG | 1 cut(s) | 613 |
| BtsIMutI | CAGTG | 2 cut(s) | 375, 613 |
| Cac8I | GCNNGC | 1 cut(s) | 387 |
| Csp6I | GTAC | 2 cut(s) | 132, 323 |
| CviAII | CATG | 4 cut(s) | 77, 536, 661, 691 |
| CviQI | GTAC | 2 cut(s) | 132, 323 |
| DdeI | CTNAG | 3 cut(s) | 105, 232, 486 |
| DpnI | GATC | 4 cut(s) | 5, 205, 453, 626 |
| DpnII | GATC | 4 cut(s) | 3, 203, 451, 624 |
| DraI | TTTAAA | 2 cut(s) | 37, 517 |
| Eco130I | CCWWGG | 1 cut(s) | 436 |
| EcoT14I | CCWWGG | 1 cut(s) | 436 |
| EcoT22I | ATGCAT | 2 cut(s) | 66, 78 |
| ErhI | CCWWGG | 1 cut(s) | 436 |
| FaeI | CATG | 4 cut(s) | 80, 539, 664, 694 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 549, 581 |
| FatI | CATG | 4 cut(s) | 76, 535, 660, 690 |
| FauNDI | CATATG | 1 cut(s) | 732 |
| FbaI | TGATCA | 2 cut(s) | 3, 624 |
| FokI | GGATG | 3 cut(s) | 276, 513, 719 |
| FspBI | CTAG | 1 cut(s) | 602 |
| HaeIII | GGCC | 1 cut(s) | 494 |
| HapII | CCGG | 1 cut(s) | 562 |
| Hin1II | CATG | 4 cut(s) | 80, 539, 664, 694 |
| HindIII | AAGCTT | 2 cut(s) | 39, 383 |
| HinfI | GANTC | 2 cut(s) | 286, 329 |
| HpaII | CCGG | 1 cut(s) | 562 |
| HphI | GGTGA | 1 cut(s) | 452 |
| Hpy166II | GTNNAC | 1 cut(s) | 728 |
| Hpy188III | TCNNGA | 1 cut(s) | 622 |
| Hpy8I | GTNNAC | 1 cut(s) | 728 |
| HpyAV | CCTTC | 4 cut(s) | 161, 484, 583, 587 |
| HpyCH4III | ACNGT | 3 cut(s) | 131, 342, 717 |
| HpyCH4IV | ACGT | 1 cut(s) | 618 |
| HpyF3I | CTNAG | 3 cut(s) | 105, 232, 486 |
| HpySE526I | ACGT | 1 cut(s) | 618 |
| Hsp92II | CATG | 4 cut(s) | 80, 539, 664, 694 |
| Ksp22I | TGATCA | 2 cut(s) | 3, 624 |
| Kzo9I | GATC | 4 cut(s) | 3, 203, 451, 624 |
| LpnPI | CCDG | 3 cut(s) | 339, 455, 575 |
| LweI | GCATC | 3 cut(s) | 317, 491, 520 |
| MaeI | CTAG | 1 cut(s) | 602 |
| MaeII | ACGT | 1 cut(s) | 618 |
| MalI | GATC | 4 cut(s) | 5, 205, 453, 626 |
| MboI | GATC | 4 cut(s) | 3, 203, 451, 624 |
| MboII | GAAGA | 4 cut(s) | 213, 373, 458, 553 |
| MluCI | AATT | 3 cut(s) | 312, 649, 680 |
| MnlI | CCTC | 4 cut(s) | 114, 210, 270, 415 |
| Mph1103I | ATGCAT | 2 cut(s) | 66, 78 |
| MroXI | GAANNNNTTC | 1 cut(s) | 597 |
| MseI | TTAA | 6 cut(s) | 36, 96, 113, 225, 516, 555 |
| MslI | CAYNNNNRTG | 1 cut(s) | 689 |
| MspI | CCGG | 1 cut(s) | 562 |
| MspR9I | CCNGG | 1 cut(s) | 562 |
| Mva1269I | GAATGC | 1 cut(s) | 78 |
| NciI | CCSGG | 1 cut(s) | 562 |
| NdeI | CATATG | 1 cut(s) | 732 |
| NdeII | GATC | 4 cut(s) | 3, 203, 451, 624 |
| NlaIII | CATG | 4 cut(s) | 80, 539, 664, 694 |
| NsiI | ATGCAT | 2 cut(s) | 66, 78 |
| PctI | GAATGC | 1 cut(s) | 78 |
| PdmI | GAANNNNTTC | 1 cut(s) | 597 |
| PfeI | GAWTC | 2 cut(s) | 286, 329 |
| RsaI | GTAC | 2 cut(s) | 133, 324 |
| RsaNI | GTAC | 2 cut(s) | 132, 323 |
| RseI | CAYNNNNRTG | 1 cut(s) | 689 |
| SaqAI | TTAA | 6 cut(s) | 36, 96, 113, 225, 516, 555 |
| Sau3AI | GATC | 4 cut(s) | 3, 203, 451, 624 |
| ScaI | AGTACT | 1 cut(s) | 133 |
| ScrFI | CCNGG | 1 cut(s) | 562 |
| SfaNI | GCATC | 3 cut(s) | 317, 491, 520 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 689 |
| Sse9I | AATT | 3 cut(s) | 312, 649, 680 |
| SspMI | CTAG | 1 cut(s) | 602 |
| StyD4I | CCNGG | 1 cut(s) | 560 |
| StyI | CCWWGG | 1 cut(s) | 436 |
| TaaI | ACNGT | 3 cut(s) | 131, 342, 717 |
| TaiI | ACGT | 1 cut(s) | 621 |
| TaqI | TCGA | 1 cut(s) | 84 |
| TasI | AATT | 3 cut(s) | 312, 649, 680 |
| TatI | WGTACW | 1 cut(s) | 131 |
| TfiI | GAWTC | 2 cut(s) | 286, 329 |
| Tru1I | TTAA | 6 cut(s) | 36, 96, 113, 225, 516, 555 |
| Tru9I | TTAA | 6 cut(s) | 36, 96, 113, 225, 516, 555 |
| TscAI | CASTG | 2 cut(s) | 375, 613 |
| TspDTI | ATGAA | 4 cut(s) | 459, 673, 677, 679 |
| TspRI | CASTG | 2 cut(s) | 375, 613 |
| XmnI | GAANNNNTTC | 1 cut(s) | 597 |
| XspI | CTAG | 1 cut(s) | 602 |
| ZrmI | AGTACT | 1 cut(s) | 133 |
| Zsp2I | ATGCAT | 2 cut(s) | 66, 78 |