gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 734 |
| AcsI | RAATTY | 4 cut(s) | 5, 22, 695, 734 |
| AfaI | GTAC | 1 cut(s) | 190 |
| AgsI | TTSAA | 7 cut(s) | 10, 94, 154, 215, 691, 739, 926 |
| AjnI | CCWGG | 1 cut(s) | 572 |
| AluBI | AGCT | 5 cut(s) | 326, 439, 460, 527, 644 |
| AluI | AGCT | 5 cut(s) | 326, 439, 460, 527, 644 |
| Alw21I | GWGCWC | 2 cut(s) | 504, 775 |
| Alw26I | GTCTC | 1 cut(s) | 47 |
| Alw44I | GTGCAC | 1 cut(s) | 500 |
| ApaLI | GTGCAC | 1 cut(s) | 500 |
| ApeKI | GCWGC | 4 cut(s) | 106, 157, 680, 683 |
| ApoI | RAATTY | 4 cut(s) | 5, 22, 695, 734 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 224, 256 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 89 |
| BaeGI | GKGCMC | 1 cut(s) | 504 |
| Bbv12I | GWGCWC | 2 cut(s) | 504, 775 |
| BbvI | GCAGC | 4 cut(s) | 118, 169, 667, 670 |
| BccI | CCATC | 1 cut(s) | 398 |
| BciT130I | CCWGG | 1 cut(s) | 574 |
| BcoDI | GTCTC | 1 cut(s) | 47 |
| BfaI | CTAG | 1 cut(s) | 497 |
| BfuAI | ACCTGC | 1 cut(s) | 734 |
| BisI | GCNGC | 4 cut(s) | 107, 158, 681, 684 |
| BlsI | GCNGC | 4 cut(s) | 108, 159, 682, 685 |
| Bme1390I | CCNGG | 1 cut(s) | 574 |
| BmiI | GGNNCC | 1 cut(s) | 940 |
| BmrFI | CCNGG | 1 cut(s) | 574 |
| BmsI | GCATC | 2 cut(s) | 196, 426 |
| BpmI | CTGGAG | 1 cut(s) | 595 |
| Bpu10I | CCTNAGC | 1 cut(s) | 309 |
| BpuEI | CTTGAG | 2 cut(s) | 419, 608 |
| BsaBI | GATNNNNATC | 1 cut(s) | 596 |
| BsaI | GGTCTC | 1 cut(s) | 47 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 353, 383 |
| Bse8I | GATNNNNATC | 1 cut(s) | 596 |
| BseBI | CCWGG | 1 cut(s) | 574 |
| BseJI | GATNNNNATC | 1 cut(s) | 596 |
| BseMII | CTCAG | 1 cut(s) | 477 |
| BseRI | GAGGAG | 1 cut(s) | 297 |
| BseSI | GKGCMC | 1 cut(s) | 504 |
| BseXI | GCAGC | 4 cut(s) | 118, 169, 667, 670 |
| BseYI | CCCAGC | 1 cut(s) | 707 |
| BsiHKAI | GWGCWC | 2 cut(s) | 504, 775 |
| BslFI | GGGAC | 2 cut(s) | 141, 226 |
| BsmAI | GTCTC | 1 cut(s) | 47 |
| BsmFI | GGGAC | 2 cut(s) | 141, 226 |
| BsmI | GAATGC | 1 cut(s) | 686 |
| Bso31I | GGTCTC | 1 cut(s) | 47 |
| Bsp1286I | GDGCHC | 2 cut(s) | 504, 775 |
| BspCNI | CTCAG | 1 cut(s) | 478 |
| BspLI | GGNNCC | 1 cut(s) | 940 |
| BspMI | ACCTGC | 1 cut(s) | 734 |
| BspTNI | GGTCTC | 1 cut(s) | 47 |
| Bst2UI | CCWGG | 1 cut(s) | 574 |
| Bst6I | CTCTTC | 1 cut(s) | 874 |
| BstDEI | CTNAG | 5 cut(s) | 162, 309, 469, 486, 875 |
| BstMAI | GTCTC | 1 cut(s) | 47 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 253 |
| BstNI | CCWGG | 1 cut(s) | 574 |
| BstNSI | RCATGY | 1 cut(s) | 173 |
| BstSCI | CCNGG | 1 cut(s) | 572 |
| BstSLI | GKGCMC | 1 cut(s) | 504 |
| BstV1I | GCAGC | 4 cut(s) | 118, 169, 667, 670 |
| BveI | ACCTGC | 1 cut(s) | 734 |
| Csp6I | GTAC | 1 cut(s) | 189 |
| CviAII | CATG | 5 cut(s) | 99, 118, 170, 297, 505 |
| CviQI | GTAC | 1 cut(s) | 189 |
| DdeI | CTNAG | 5 cut(s) | 162, 309, 469, 486, 875 |
| Eam1104I | CTCTTC | 1 cut(s) | 874 |
| EarI | CTCTTC | 1 cut(s) | 874 |
| Eco31I | GGTCTC | 1 cut(s) | 47 |
| EcoRII | CCWGG | 1 cut(s) | 572 |
| EcoT22I | ATGCAT | 1 cut(s) | 211 |
| FaeI | CATG | 5 cut(s) | 102, 121, 173, 300, 508 |
| FaqI | GGGAC | 2 cut(s) | 141, 226 |
| FatI | CATG | 5 cut(s) | 98, 117, 169, 296, 504 |
| Fnu4HI | GCNGC | 4 cut(s) | 107, 158, 681, 684 |
| Fsp4HI | GCNGC | 4 cut(s) | 107, 158, 681, 684 |
| FspBI | CTAG | 1 cut(s) | 497 |
| GluI | GCNGC | 4 cut(s) | 107, 158, 681, 684 |
| GsaI | CCCAGC | 1 cut(s) | 711 |
| GsuI | CTGGAG | 1 cut(s) | 595 |
| Hin1II | CATG | 5 cut(s) | 102, 121, 173, 300, 508 |
| HincII | GTYRAC | 2 cut(s) | 649, 864 |
| HindII | GTYRAC | 2 cut(s) | 649, 864 |
| HindIII | AAGCTT | 1 cut(s) | 437 |
| HinfI | GANTC | 4 cut(s) | 55, 121, 569, 922 |
| Hpy166II | GTNNAC | 3 cut(s) | 502, 649, 864 |
| Hpy188I | TCNGA | 6 cut(s) | 28, 54, 352, 422, 487, 819 |
| Hpy188III | TCNNGA | 3 cut(s) | 608, 625, 756 |
| Hpy8I | GTNNAC | 3 cut(s) | 502, 649, 864 |
| HpyAV | CCTTC | 3 cut(s) | 303, 670, 816 |
| HpyCH4V | TGCA | 5 cut(s) | 209, 256, 502, 596, 686 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 253 |
| HpyF3I | CTNAG | 5 cut(s) | 162, 309, 469, 486, 875 |
| Hsp92II | CATG | 5 cut(s) | 102, 121, 173, 300, 508 |
| LmnI | GCTCC | 1 cut(s) | 414 |
| Lsp1109I | GCAGC | 4 cut(s) | 118, 169, 667, 670 |
| LweI | GCATC | 2 cut(s) | 196, 426 |
| MaeI | CTAG | 1 cut(s) | 497 |
| MaeIII | GTNAC | 1 cut(s) | 165 |
| MboII | GAAGA | 6 cut(s) | 626, 650, 685, 741, 744, 891 |
| MhlI | GDGCHC | 2 cut(s) | 504, 775 |
| MluCI | AATT | 8 cut(s) | 5, 22, 74, 111, 480, 491, 695, 734 |
| Mph1103I | ATGCAT | 1 cut(s) | 211 |
| MroXI | GAANNNNTTC | 1 cut(s) | 89 |
| MseI | TTAA | 4 cut(s) | 77, 582, 897, 912 |
| MspA1I | CMGCKG | 1 cut(s) | 527 |
| MspR9I | CCNGG | 1 cut(s) | 574 |
| Mva1269I | GAATGC | 1 cut(s) | 686 |
| MvaI | CCWGG | 1 cut(s) | 574 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 253 |
| NlaIII | CATG | 5 cut(s) | 102, 121, 173, 300, 508 |
| NlaIV | GGNNCC | 1 cut(s) | 940 |
| NmuCI | GTSAC | 1 cut(s) | 165 |
| NsiI | ATGCAT | 1 cut(s) | 211 |
| NspI | RCATGY | 1 cut(s) | 173 |
| PctI | GAATGC | 1 cut(s) | 686 |
| PdmI | GAANNNNTTC | 1 cut(s) | 89 |
| PfeI | GAWTC | 4 cut(s) | 55, 121, 569, 922 |
| PfoI | TCCNGGA | 1 cut(s) | 572 |
| PkrI | GCNGC | 4 cut(s) | 108, 159, 682, 685 |
| Psp6I | CCWGG | 1 cut(s) | 572 |
| PspFI | CCCAGC | 1 cut(s) | 707 |
| PspGI | CCWGG | 1 cut(s) | 572 |
| PspN4I | GGNNCC | 1 cut(s) | 940 |
| PvuII | CAGCTG | 1 cut(s) | 527 |
| RsaI | GTAC | 1 cut(s) | 190 |
| RsaNI | GTAC | 1 cut(s) | 189 |
| SaqAI | TTAA | 4 cut(s) | 77, 582, 897, 912 |
| SatI | GCNGC | 4 cut(s) | 107, 158, 681, 684 |
| ScrFI | CCNGG | 1 cut(s) | 574 |
| SduI | GDGCHC | 2 cut(s) | 504, 775 |
| SfaNI | GCATC | 2 cut(s) | 196, 426 |
| SmlI | CTYRAG | 2 cut(s) | 434, 623 |
| SmoI | CTYRAG | 2 cut(s) | 434, 623 |
| Sse9I | AATT | 8 cut(s) | 5, 22, 74, 111, 480, 491, 695, 734 |
| SspI | AATATT | 3 cut(s) | 49, 67, 448 |
| SspMI | CTAG | 1 cut(s) | 497 |
| StyD4I | CCNGG | 1 cut(s) | 572 |
| TasI | AATT | 8 cut(s) | 5, 22, 74, 111, 480, 491, 695, 734 |
| TatI | WGTACW | 1 cut(s) | 188 |
| TfiI | GAWTC | 4 cut(s) | 55, 121, 569, 922 |
| Tru1I | TTAA | 4 cut(s) | 77, 582, 897, 912 |
| Tru9I | TTAA | 4 cut(s) | 77, 582, 897, 912 |
| TseFI | GTSAC | 1 cut(s) | 165 |
| TseI | GCWGC | 4 cut(s) | 106, 157, 680, 683 |
| Tsp45I | GTSAC | 1 cut(s) | 165 |
| TspDTI | ATGAA | 6 cut(s) | 17, 134, 249, 285, 549, 600 |
| VneI | GTGCAC | 1 cut(s) | 500 |
| XapI | RAATTY | 4 cut(s) | 5, 22, 695, 734 |
| XceI | RCATGY | 1 cut(s) | 173 |
| XmnI | GAANNNNTTC | 1 cut(s) | 89 |
| XspI | CTAG | 1 cut(s) | 497 |
| Zsp2I | ATGCAT | 1 cut(s) | 211 |