gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 127 |
| AclWI | GGATC | 1 cut(s) | 12 |
| AcuI | CTGAAG | 2 cut(s) | 243, 362 |
| AfaI | GTAC | 1 cut(s) | 86 |
| AflIII | ACRYGT | 1 cut(s) | 464 |
| AjnI | CCWGG | 3 cut(s) | 171, 204, 357 |
| AluBI | AGCT | 3 cut(s) | 160, 221, 227 |
| AluI | AGCT | 3 cut(s) | 160, 221, 227 |
| AlwI | GGATC | 1 cut(s) | 12 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 385 |
| Ama87I | CYCGRG | 1 cut(s) | 319 |
| AoxI | GGCC | 1 cut(s) | 102 |
| ApeKI | GCWGC | 1 cut(s) | 227 |
| AvaI | CYCGRG | 1 cut(s) | 319 |
| AxyI | CCTNAGG | 1 cut(s) | 326 |
| BbvI | GCAGC | 1 cut(s) | 214 |
| BciT130I | CCWGG | 3 cut(s) | 173, 206, 359 |
| BfaI | CTAG | 4 cut(s) | 32, 161, 182, 231 |
| BisI | GCNGC | 1 cut(s) | 228 |
| BlsI | GCNGC | 1 cut(s) | 229 |
| Bme1390I | CCNGG | 3 cut(s) | 173, 206, 359 |
| BmeT110I | CYCGRG | 1 cut(s) | 319 |
| BmiI | GGNNCC | 1 cut(s) | 443 |
| BmrFI | CCNGG | 3 cut(s) | 173, 206, 359 |
| BsaJI | CCNNGG | 3 cut(s) | 171, 297, 357 |
| Bse1I | ACTGG | 1 cut(s) | 443 |
| Bse21I | CCTNAGG | 1 cut(s) | 326 |
| BseBI | CCWGG | 3 cut(s) | 173, 206, 359 |
| BseDI | CCNNGG | 3 cut(s) | 171, 297, 357 |
| BseMII | CTCAG | 2 cut(s) | 317, 398 |
| BseNI | ACTGG | 1 cut(s) | 443 |
| BseXI | GCAGC | 1 cut(s) | 214 |
| BshFI | GGCC | 1 cut(s) | 104 |
| BsiHKCI | CYCGRG | 1 cut(s) | 319 |
| BsnI | GGCC | 1 cut(s) | 104 |
| BsoBI | CYCGRG | 1 cut(s) | 319 |
| Bsp143I | GATC | 1 cut(s) | 4 |
| Bsp19I | CCATGG | 1 cut(s) | 297 |
| BspANI | GGCC | 1 cut(s) | 104 |
| BspCNI | CTCAG | 2 cut(s) | 318, 399 |
| BspLI | GGNNCC | 1 cut(s) | 443 |
| BspPI | GGATC | 1 cut(s) | 12 |
| BsrI | ACTGG | 1 cut(s) | 443 |
| BssECI | CCNNGG | 3 cut(s) | 171, 297, 357 |
| BssMI | GATC | 1 cut(s) | 4 |
| BssT1I | CCWWGG | 1 cut(s) | 297 |
| Bst2UI | CCWGG | 3 cut(s) | 173, 206, 359 |
| Bst4CI | ACNGT | 2 cut(s) | 139, 401 |
| BstDEI | CTNAG | 3 cut(s) | 326, 407, 522 |
| BstDSI | CCRYGG | 1 cut(s) | 297 |
| BstKTI | GATC | 1 cut(s) | 7 |
| BstMBI | GATC | 1 cut(s) | 4 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 227 |
| BstNI | CCWGG | 3 cut(s) | 173, 206, 359 |
| BstNSI | RCATGY | 1 cut(s) | 468 |
| BstSCI | CCNGG | 3 cut(s) | 171, 204, 357 |
| BstV1I | GCAGC | 1 cut(s) | 214 |
| BstX2I | RGATCY | 1 cut(s) | 4 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 304 |
| BstYI | RGATCY | 1 cut(s) | 4 |
| Bsu36I | CCTNAGG | 1 cut(s) | 326 |
| BsuRI | GGCC | 1 cut(s) | 104 |
| BtgI | CCRYGG | 1 cut(s) | 297 |
| CaiI | CAGNNNCTG | 1 cut(s) | 385 |
| Csp6I | GTAC | 1 cut(s) | 85 |
| CviAII | CATG | 5 cut(s) | 298, 340, 368, 422, 465 |
| CviJI | RGCY | 7 cut(s) | 104, 160, 188, 221, 227, 235, 324 |
| CviKI_1 | RGCY | 7 cut(s) | 104, 160, 188, 221, 227, 235, 324 |
| CviQI | GTAC | 1 cut(s) | 85 |
| DdeI | CTNAG | 3 cut(s) | 326, 407, 522 |
| DpnI | GATC | 1 cut(s) | 6 |
| DpnII | GATC | 1 cut(s) | 4 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 127 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 127 |
| Eco130I | CCWWGG | 1 cut(s) | 297 |
| Eco57I | CTGAAG | 2 cut(s) | 243, 362 |
| Eco81I | CCTNAGG | 1 cut(s) | 326 |
| Eco88I | CYCGRG | 1 cut(s) | 319 |
| EcoRII | CCWGG | 3 cut(s) | 171, 204, 357 |
| EcoT14I | CCWWGG | 1 cut(s) | 297 |
| ErhI | CCWWGG | 1 cut(s) | 297 |
| FaeI | CATG | 5 cut(s) | 301, 343, 371, 425, 468 |
| FaiI | YATR | 9 cut(s) | 128, 191, 294, 299, 341, 369, 418, 423, 466 |
| FatI | CATG | 5 cut(s) | 297, 339, 367, 421, 464 |
| Fnu4HI | GCNGC | 1 cut(s) | 228 |
| Fsp4HI | GCNGC | 1 cut(s) | 228 |
| FspBI | CTAG | 4 cut(s) | 32, 161, 182, 231 |
| GluI | GCNGC | 1 cut(s) | 228 |
| HaeIII | GGCC | 1 cut(s) | 104 |
| Hin1II | CATG | 5 cut(s) | 301, 343, 371, 425, 468 |
| HincII | GTYRAC | 1 cut(s) | 310 |
| HindII | GTYRAC | 1 cut(s) | 310 |
| HinfI | GANTC | 4 cut(s) | 41, 353, 431, 485 |
| Hpy166II | GTNNAC | 1 cut(s) | 310 |
| Hpy188I | TCNGA | 3 cut(s) | 15, 46, 133 |
| Hpy188III | TCNNGA | 3 cut(s) | 32, 276, 489 |
| Hpy8I | GTNNAC | 1 cut(s) | 310 |
| HpyAV | CCTTC | 1 cut(s) | 490 |
| HpyCH4III | ACNGT | 2 cut(s) | 139, 401 |
| HpyCH4V | TGCA | 1 cut(s) | 93 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 227 |
| HpyF3I | CTNAG | 3 cut(s) | 326, 407, 522 |
| Hsp92II | CATG | 5 cut(s) | 301, 343, 371, 425, 468 |
| Kzo9I | GATC | 1 cut(s) | 4 |
| LmnI | GCTCC | 2 cut(s) | 157, 289 |
| Lsp1109I | GCAGC | 1 cut(s) | 214 |
| MaeI | CTAG | 4 cut(s) | 32, 161, 182, 231 |
| MaeIII | GTNAC | 3 cut(s) | 212, 381, 401 |
| MalI | GATC | 1 cut(s) | 6 |
| MboI | GATC | 1 cut(s) | 4 |
| MboII | GAAGA | 1 cut(s) | 494 |
| MflI | RGATCY | 1 cut(s) | 4 |
| MluCI | AATT | 2 cut(s) | 506, 515 |
| MlyI | GAGTC | 2 cut(s) | 347, 440 |
| MmeI | TCCRAC | 1 cut(s) | 236 |
| MnlI | CCTC | 6 cut(s) | 13, 39, 133, 237, 321, 424 |
| MseI | TTAA | 5 cut(s) | 117, 240, 248, 348, 518 |
| MspR9I | CCNGG | 3 cut(s) | 173, 206, 359 |
| MvaI | CCWGG | 3 cut(s) | 173, 206, 359 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 227 |
| NcoI | CCATGG | 1 cut(s) | 297 |
| NdeII | GATC | 1 cut(s) | 4 |
| NlaIII | CATG | 5 cut(s) | 301, 343, 371, 425, 468 |
| NlaIV | GGNNCC | 1 cut(s) | 443 |
| NmuCI | GTSAC | 1 cut(s) | 212 |
| NspI | RCATGY | 1 cut(s) | 468 |
| PaeR7I | CTCGAG | 1 cut(s) | 319 |
| PciI | ACATGT | 1 cut(s) | 464 |
| PfeI | GAWTC | 2 cut(s) | 41, 485 |
| PkrI | GCNGC | 1 cut(s) | 229 |
| PleI | GAGTC | 2 cut(s) | 347, 439 |
| PpsI | GAGTC | 2 cut(s) | 347, 439 |
| PscI | ACATGT | 1 cut(s) | 464 |
| Psp6I | CCWGG | 3 cut(s) | 171, 204, 357 |
| PspGI | CCWGG | 3 cut(s) | 171, 204, 357 |
| PspN4I | GGNNCC | 1 cut(s) | 443 |
| PspXI | VCTCGAGB | 1 cut(s) | 319 |
| PstNI | CAGNNNCTG | 1 cut(s) | 385 |
| PsuI | RGATCY | 1 cut(s) | 4 |
| RsaI | GTAC | 1 cut(s) | 86 |
| RsaNI | GTAC | 1 cut(s) | 85 |
| SaqAI | TTAA | 5 cut(s) | 117, 240, 248, 348, 518 |
| SatI | GCNGC | 1 cut(s) | 228 |
| Sau3AI | GATC | 1 cut(s) | 4 |
| SchI | GAGTC | 2 cut(s) | 347, 440 |
| ScrFI | CCNGG | 3 cut(s) | 173, 206, 359 |
| Sfr274I | CTCGAG | 1 cut(s) | 319 |
| SlaI | CTCGAG | 1 cut(s) | 319 |
| SmlI | CTYRAG | 1 cut(s) | 319 |
| SmoI | CTYRAG | 1 cut(s) | 319 |
| Sse9I | AATT | 2 cut(s) | 506, 515 |
| SspMI | CTAG | 4 cut(s) | 32, 161, 182, 231 |
| StyD4I | CCNGG | 3 cut(s) | 171, 204, 357 |
| StyI | CCWWGG | 1 cut(s) | 297 |
| TaaI | ACNGT | 2 cut(s) | 139, 401 |
| TaqI | TCGA | 2 cut(s) | 275, 320 |
| TasI | AATT | 2 cut(s) | 506, 515 |
| TfiI | GAWTC | 2 cut(s) | 41, 485 |
| Tru1I | TTAA | 5 cut(s) | 117, 240, 248, 348, 518 |
| Tru9I | TTAA | 5 cut(s) | 117, 240, 248, 348, 518 |
| TseFI | GTSAC | 1 cut(s) | 212 |
| TseI | GCWGC | 1 cut(s) | 227 |
| Tsp45I | GTSAC | 1 cut(s) | 212 |
| TspDTI | ATGAA | 1 cut(s) | 356 |
| XbaI | TCTAGA | 1 cut(s) | 31 |
| XceI | RCATGY | 1 cut(s) | 468 |
| XhoI | CTCGAG | 1 cut(s) | 319 |
| XspI | CTAG | 4 cut(s) | 32, 161, 182, 231 |