gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 129 |
| AclWI | GGATC | 3 cut(s) | 40, 104, 117 |
| AcsI | RAATTY | 2 cut(s) | 78, 237 |
| AfaI | GTAC | 1 cut(s) | 290 |
| AflIII | ACRYGT | 1 cut(s) | 156 |
| AgsI | TTSAA | 4 cut(s) | 20, 65, 70, 271 |
| AjnI | CCWGG | 1 cut(s) | 72 |
| AluBI | AGCT | 1 cut(s) | 124 |
| AluI | AGCT | 1 cut(s) | 124 |
| Alw26I | GTCTC | 2 cut(s) | 51, 140 |
| AlwI | GGATC | 3 cut(s) | 40, 104, 117 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 248 |
| AoxI | GGCC | 1 cut(s) | 189 |
| ApoI | RAATTY | 2 cut(s) | 78, 237 |
| AsuNHI | GCTAGC | 1 cut(s) | 124 |
| BamHI | GGATCC | 1 cut(s) | 109 |
| BciT130I | CCWGG | 1 cut(s) | 74 |
| BclI | TGATCA | 1 cut(s) | 91 |
| BcoDI | GTCTC | 2 cut(s) | 51, 140 |
| BfaI | CTAG | 1 cut(s) | 125 |
| BfmI | CTRYAG | 1 cut(s) | 164 |
| BisI | GCNGC | 1 cut(s) | 129 |
| BlsI | GCNGC | 1 cut(s) | 130 |
| Bme1390I | CCNGG | 1 cut(s) | 74 |
| BmiI | GGNNCC | 1 cut(s) | 111 |
| BmrFI | CCNGG | 1 cut(s) | 74 |
| BmsI | GCATC | 2 cut(s) | 15, 211 |
| BmtI | GCTAGC | 1 cut(s) | 128 |
| Bpu10I | CCTNAGC | 1 cut(s) | 101 |
| BsaJI | CCNNGG | 1 cut(s) | 73 |
| BseBI | CCWGG | 1 cut(s) | 74 |
| BseDI | CCNNGG | 1 cut(s) | 73 |
| BshFI | GGCC | 1 cut(s) | 191 |
| BsmAI | GTCTC | 2 cut(s) | 51, 140 |
| BsnI | GGCC | 1 cut(s) | 191 |
| Bsp143I | GATC | 4 cut(s) | 32, 91, 109, 195 |
| BspACI | CCGC | 1 cut(s) | 129 |
| BspANI | GGCC | 1 cut(s) | 191 |
| BspLI | GGNNCC | 1 cut(s) | 111 |
| BspOI | GCTAGC | 1 cut(s) | 128 |
| BspPI | GGATC | 3 cut(s) | 40, 104, 117 |
| BssECI | CCNNGG | 1 cut(s) | 73 |
| BssMI | GATC | 4 cut(s) | 32, 91, 109, 195 |
| Bst2UI | CCWGG | 1 cut(s) | 74 |
| Bst4CI | ACNGT | 1 cut(s) | 168 |
| BstC8I | GCNNGC | 2 cut(s) | 126, 139 |
| BstDEI | CTNAG | 2 cut(s) | 101, 150 |
| BstKTI | GATC | 4 cut(s) | 35, 94, 112, 198 |
| BstMAI | GTCTC | 2 cut(s) | 51, 140 |
| BstMBI | GATC | 4 cut(s) | 32, 91, 109, 195 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 134 |
| BstNI | CCWGG | 1 cut(s) | 74 |
| BstNSI | RCATGY | 1 cut(s) | 160 |
| BstSCI | CCNGG | 1 cut(s) | 72 |
| BstSFI | CTRYAG | 1 cut(s) | 164 |
| BstX2I | RGATCY | 1 cut(s) | 109 |
| BstYI | RGATCY | 1 cut(s) | 109 |
| BsuRI | GGCC | 1 cut(s) | 191 |
| BtsI | GCAGTG | 1 cut(s) | 231 |
| BtsIMutI | CAGTG | 2 cut(s) | 173, 231 |
| Cac8I | GCNNGC | 2 cut(s) | 126, 139 |
| CaiI | CAGNNNCTG | 1 cut(s) | 248 |
| Csp6I | GTAC | 1 cut(s) | 289 |
| CviAII | CATG | 4 cut(s) | 95, 157, 202, 214 |
| CviJI | RGCY | 3 cut(s) | 124, 128, 191 |
| CviKI_1 | RGCY | 3 cut(s) | 124, 128, 191 |
| CviQI | GTAC | 1 cut(s) | 289 |
| DdeI | CTNAG | 2 cut(s) | 101, 150 |
| DpnI | GATC | 4 cut(s) | 34, 93, 111, 197 |
| DpnII | GATC | 4 cut(s) | 32, 91, 109, 195 |
| EcoRI | GAATTC | 1 cut(s) | 237 |
| EcoRII | CCWGG | 1 cut(s) | 72 |
| FaeI | CATG | 4 cut(s) | 98, 160, 205, 217 |
| FaiI | YATR | 6 cut(s) | 96, 158, 174, 180, 203, 215 |
| FatI | CATG | 4 cut(s) | 94, 156, 201, 213 |
| FbaI | TGATCA | 1 cut(s) | 91 |
| Fnu4HI | GCNGC | 1 cut(s) | 129 |
| Fsp4HI | GCNGC | 1 cut(s) | 129 |
| FspBI | CTAG | 1 cut(s) | 125 |
| GluI | GCNGC | 1 cut(s) | 129 |
| HaeIII | GGCC | 1 cut(s) | 191 |
| Hin1II | CATG | 4 cut(s) | 98, 160, 205, 217 |
| HinfI | GANTC | 1 cut(s) | 245 |
| Hpy188I | TCNGA | 2 cut(s) | 250, 299 |
| Hpy188III | TCNNGA | 1 cut(s) | 242 |
| HpyAV | CCTTC | 2 cut(s) | 46, 223 |
| HpyCH4III | ACNGT | 1 cut(s) | 168 |
| HpyCH4V | TGCA | 4 cut(s) | 137, 201, 224, 257 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 134 |
| HpyF3I | CTNAG | 2 cut(s) | 101, 150 |
| Hsp92II | CATG | 4 cut(s) | 98, 160, 205, 217 |
| Ksp22I | TGATCA | 1 cut(s) | 91 |
| Kzo9I | GATC | 4 cut(s) | 32, 91, 109, 195 |
| LmnI | GCTCC | 1 cut(s) | 121 |
| LpnPI | CCDG | 4 cut(s) | 59, 86, 104, 255 |
| LweI | GCATC | 2 cut(s) | 15, 211 |
| MaeI | CTAG | 1 cut(s) | 125 |
| MaeIII | GTNAC | 1 cut(s) | 11 |
| MalI | GATC | 4 cut(s) | 34, 93, 111, 197 |
| MboI | GATC | 4 cut(s) | 32, 91, 109, 195 |
| MboII | GAAGA | 1 cut(s) | 217 |
| MflI | RGATCY | 1 cut(s) | 109 |
| MluCI | AATT | 4 cut(s) | 20, 65, 78, 237 |
| MnlI | CCTC | 2 cut(s) | 100, 227 |
| MspR9I | CCNGG | 1 cut(s) | 74 |
| MvaI | CCWGG | 1 cut(s) | 74 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 134 |
| NdeII | GATC | 4 cut(s) | 32, 91, 109, 195 |
| NheI | GCTAGC | 1 cut(s) | 124 |
| NlaIII | CATG | 4 cut(s) | 98, 160, 205, 217 |
| NlaIV | GGNNCC | 1 cut(s) | 111 |
| NspI | RCATGY | 1 cut(s) | 160 |
| PciI | ACATGT | 1 cut(s) | 156 |
| PfeI | GAWTC | 1 cut(s) | 245 |
| PkrI | GCNGC | 1 cut(s) | 130 |
| PscI | ACATGT | 1 cut(s) | 156 |
| Psp6I | CCWGG | 1 cut(s) | 72 |
| PspGI | CCWGG | 1 cut(s) | 72 |
| PspN4I | GGNNCC | 1 cut(s) | 111 |
| PstNI | CAGNNNCTG | 1 cut(s) | 248 |
| PsuI | RGATCY | 1 cut(s) | 109 |
| RsaI | GTAC | 1 cut(s) | 290 |
| RsaNI | GTAC | 1 cut(s) | 289 |
| SatI | GCNGC | 1 cut(s) | 129 |
| Sau3AI | GATC | 4 cut(s) | 32, 91, 109, 195 |
| ScrFI | CCNGG | 1 cut(s) | 74 |
| SetI | ASST | 3 cut(s) | 75, 126, 297 |
| SfaNI | GCATC | 2 cut(s) | 15, 211 |
| SfcI | CTRYAG | 1 cut(s) | 164 |
| Sse9I | AATT | 4 cut(s) | 20, 65, 78, 237 |
| SsiI | CCGC | 1 cut(s) | 129 |
| SspMI | CTAG | 1 cut(s) | 125 |
| StyD4I | CCNGG | 1 cut(s) | 72 |
| TaaI | ACNGT | 1 cut(s) | 168 |
| TasI | AATT | 4 cut(s) | 20, 65, 78, 237 |
| TatI | WGTACW | 1 cut(s) | 288 |
| TauI | GCSGC | 1 cut(s) | 131 |
| TfiI | GAWTC | 1 cut(s) | 245 |
| TscAI | CASTG | 2 cut(s) | 173, 231 |
| TspDTI | ATGAA | 1 cut(s) | 218 |
| TspRI | CASTG | 2 cut(s) | 173, 231 |
| XapI | RAATTY | 2 cut(s) | 78, 237 |
| XceI | RCATGY | 1 cut(s) | 160 |
| XspI | CTAG | 1 cut(s) | 125 |