gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 250 |
| AclWI | GGATC | 1 cut(s) | 337 |
| AcsI | RAATTY | 3 cut(s) | 82, 299, 360 |
| AcuI | CTGAAG | 1 cut(s) | 134 |
| AfaI | GTAC | 1 cut(s) | 185 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 352 |
| AgsI | TTSAA | 4 cut(s) | 82, 304, 329, 365 |
| AluBI | AGCT | 1 cut(s) | 34 |
| AluI | AGCT | 1 cut(s) | 34 |
| Alw21I | GWGCWC | 1 cut(s) | 431 |
| Alw26I | GTCTC | 1 cut(s) | 63 |
| AlwI | GGATC | 1 cut(s) | 337 |
| ApeKI | GCWGC | 2 cut(s) | 131, 414 |
| ApoI | RAATTY | 3 cut(s) | 82, 299, 360 |
| Bbv12I | GWGCWC | 1 cut(s) | 431 |
| BbvI | GCAGC | 2 cut(s) | 143, 401 |
| BccI | CCATC | 1 cut(s) | 193 |
| BclI | TGATCA | 1 cut(s) | 207 |
| BcoDI | GTCTC | 1 cut(s) | 63 |
| BfaI | CTAG | 3 cut(s) | 150, 162, 266 |
| BglII | AGATCT | 1 cut(s) | 121 |
| BisI | GCNGC | 2 cut(s) | 132, 415 |
| BlsI | GCNGC | 2 cut(s) | 133, 416 |
| BsaJI | CCNNGG | 1 cut(s) | 270 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 352 |
| BseDI | CCNNGG | 1 cut(s) | 270 |
| BseGI | GGATG | 2 cut(s) | 103, 361 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 352 |
| BseMII | CTCAG | 2 cut(s) | 132, 437 |
| BseXI | GCAGC | 2 cut(s) | 143, 401 |
| BsiHKAI | GWGCWC | 1 cut(s) | 431 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 352 |
| BsmAI | GTCTC | 1 cut(s) | 63 |
| Bsp1286I | GDGCHC | 1 cut(s) | 431 |
| Bsp143I | GATC | 3 cut(s) | 121, 207, 342 |
| BspCNI | CTCAG | 2 cut(s) | 133, 436 |
| BspHI | TCATGA | 1 cut(s) | 210 |
| BspPI | GGATC | 1 cut(s) | 337 |
| BspQI | GCTCTTC | 1 cut(s) | 215 |
| BssECI | CCNNGG | 1 cut(s) | 270 |
| BssMI | GATC | 3 cut(s) | 121, 207, 342 |
| BssNAI | GTATAC | 1 cut(s) | 251 |
| BssT1I | CCWWGG | 1 cut(s) | 270 |
| Bst1107I | GTATAC | 1 cut(s) | 251 |
| Bst6I | CTCTTC | 1 cut(s) | 215 |
| BstC8I | GCNNGC | 1 cut(s) | 227 |
| BstDEI | CTNAG | 2 cut(s) | 141, 423 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 350 |
| BstF5I | GGATG | 2 cut(s) | 103, 361 |
| BstKTI | GATC | 3 cut(s) | 124, 210, 345 |
| BstMAI | GTCTC | 1 cut(s) | 63 |
| BstMBI | GATC | 3 cut(s) | 121, 207, 342 |
| BstNSI | RCATGY | 1 cut(s) | 229 |
| BstV1I | GCAGC | 2 cut(s) | 143, 401 |
| BstX2I | RGATCY | 2 cut(s) | 121, 342 |
| BstYI | RGATCY | 2 cut(s) | 121, 342 |
| BstZ17I | GTATAC | 1 cut(s) | 251 |
| BtsCI | GGATG | 2 cut(s) | 103, 361 |
| BtsIMutI | CAGTG | 1 cut(s) | 203 |
| Cac8I | GCNNGC | 1 cut(s) | 227 |
| CciI | TCATGA | 1 cut(s) | 210 |
| Csp6I | GTAC | 1 cut(s) | 184 |
| CviAII | CATG | 6 cut(s) | 13, 107, 211, 226, 230, 437 |
| CviJI | RGCY | 6 cut(s) | 34, 45, 161, 269, 320, 422 |
| CviKI_1 | RGCY | 6 cut(s) | 34, 45, 161, 269, 320, 422 |
| CviQI | GTAC | 1 cut(s) | 184 |
| DdeI | CTNAG | 2 cut(s) | 141, 423 |
| DpnI | GATC | 3 cut(s) | 123, 209, 344 |
| DpnII | GATC | 3 cut(s) | 121, 207, 342 |
| Eam1104I | CTCTTC | 1 cut(s) | 215 |
| EarI | CTCTTC | 1 cut(s) | 215 |
| Eco130I | CCWWGG | 1 cut(s) | 270 |
| Eco57I | CTGAAG | 1 cut(s) | 134 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 350 |
| EcoT14I | CCWWGG | 1 cut(s) | 270 |
| EcoT22I | ATGCAT | 1 cut(s) | 231 |
| ErhI | CCWWGG | 1 cut(s) | 270 |
| FaeI | CATG | 6 cut(s) | 16, 110, 214, 229, 233, 440 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 263, 295 |
| FatI | CATG | 6 cut(s) | 12, 106, 210, 225, 229, 436 |
| FbaI | TGATCA | 1 cut(s) | 207 |
| FblI | GTMKAC | 1 cut(s) | 250 |
| Fnu4HI | GCNGC | 2 cut(s) | 132, 415 |
| FokI | GGATG | 2 cut(s) | 110, 368 |
| Fsp4HI | GCNGC | 2 cut(s) | 132, 415 |
| FspBI | CTAG | 3 cut(s) | 150, 162, 266 |
| GluI | GCNGC | 2 cut(s) | 132, 415 |
| Hin1II | CATG | 6 cut(s) | 16, 110, 214, 229, 233, 440 |
| HinfI | GANTC | 1 cut(s) | 257 |
| Hpy166II | GTNNAC | 1 cut(s) | 251 |
| Hpy188I | TCNGA | 7 cut(s) | 27, 39, 114, 262, 313, 337, 426 |
| Hpy188III | TCNNGA | 1 cut(s) | 211 |
| Hpy8I | GTNNAC | 1 cut(s) | 251 |
| HpyAV | CCTTC | 2 cut(s) | 109, 356 |
| HpyCH4V | TGCA | 3 cut(s) | 229, 293, 417 |
| HpyF3I | CTNAG | 2 cut(s) | 141, 423 |
| Hsp92II | CATG | 6 cut(s) | 16, 110, 214, 229, 233, 440 |
| Ksp22I | TGATCA | 1 cut(s) | 207 |
| Kzo9I | GATC | 3 cut(s) | 121, 207, 342 |
| LguI | GCTCTTC | 1 cut(s) | 215 |
| LpnPI | CCDG | 2 cut(s) | 141, 267 |
| Lsp1109I | GCAGC | 2 cut(s) | 143, 401 |
| MaeI | CTAG | 3 cut(s) | 150, 162, 266 |
| MalI | GATC | 3 cut(s) | 123, 209, 344 |
| MboI | GATC | 3 cut(s) | 121, 207, 342 |
| MboII | GAAGA | 2 cut(s) | 131, 232 |
| MfeI | CAATTG | 1 cut(s) | 442 |
| MflI | RGATCY | 2 cut(s) | 121, 342 |
| MhlI | GDGCHC | 1 cut(s) | 431 |
| MluCI | AATT | 6 cut(s) | 77, 82, 283, 299, 360, 442 |
| MnlI | CCTC | 2 cut(s) | 234, 393 |
| Mph1103I | ATGCAT | 1 cut(s) | 231 |
| MseI | TTAA | 3 cut(s) | 137, 282, 404 |
| MslI | CAYNNNNRTG | 2 cut(s) | 234, 354 |
| MunI | CAATTG | 1 cut(s) | 442 |
| NdeII | GATC | 3 cut(s) | 121, 207, 342 |
| NlaIII | CATG | 6 cut(s) | 16, 110, 214, 229, 233, 440 |
| NsiI | ATGCAT | 1 cut(s) | 231 |
| NspI | RCATGY | 1 cut(s) | 229 |
| PaeI | GCATGC | 1 cut(s) | 229 |
| PagI | TCATGA | 1 cut(s) | 210 |
| PciSI | GCTCTTC | 1 cut(s) | 215 |
| PfeI | GAWTC | 1 cut(s) | 257 |
| PkrI | GCNGC | 2 cut(s) | 133, 416 |
| PsuI | RGATCY | 2 cut(s) | 121, 342 |
| RsaI | GTAC | 1 cut(s) | 185 |
| RsaNI | GTAC | 1 cut(s) | 184 |
| RseI | CAYNNNNRTG | 2 cut(s) | 234, 354 |
| SapI | GCTCTTC | 1 cut(s) | 215 |
| SaqAI | TTAA | 3 cut(s) | 137, 282, 404 |
| SatI | GCNGC | 2 cut(s) | 132, 415 |
| Sau3AI | GATC | 3 cut(s) | 121, 207, 342 |
| SduI | GDGCHC | 1 cut(s) | 431 |
| SetI | ASST | 5 cut(s) | 36, 256, 276, 309, 404 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 234, 354 |
| SphI | GCATGC | 1 cut(s) | 229 |
| Sse9I | AATT | 6 cut(s) | 77, 82, 283, 299, 360, 442 |
| SspI | AATATT | 1 cut(s) | 93 |
| SspMI | CTAG | 3 cut(s) | 150, 162, 266 |
| StyI | CCWWGG | 1 cut(s) | 270 |
| TasI | AATT | 6 cut(s) | 77, 82, 283, 299, 360, 442 |
| TfiI | GAWTC | 1 cut(s) | 257 |
| Tru1I | TTAA | 3 cut(s) | 137, 282, 404 |
| Tru9I | TTAA | 3 cut(s) | 137, 282, 404 |
| TscAI | CASTG | 1 cut(s) | 210 |
| TseI | GCWGC | 2 cut(s) | 131, 414 |
| TspDTI | ATGAA | 2 cut(s) | 17, 372 |
| TspRI | CASTG | 1 cut(s) | 210 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 350 |
| XapI | RAATTY | 3 cut(s) | 82, 299, 360 |
| XceI | RCATGY | 1 cut(s) | 229 |
| XmiI | GTMKAC | 1 cut(s) | 250 |
| XspI | CTAG | 3 cut(s) | 150, 162, 266 |
| Zsp2I | ATGCAT | 1 cut(s) | 231 |