gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 435 |
| AclWI | GGATC | 2 cut(s) | 174, 415 |
| AfaI | GTAC | 1 cut(s) | 353 |
| AgsI | TTSAA | 3 cut(s) | 10, 130, 349 |
| AluBI | AGCT | 3 cut(s) | 256, 320, 403 |
| AluI | AGCT | 3 cut(s) | 256, 320, 403 |
| Alw21I | GWGCWC | 1 cut(s) | 143 |
| AlwI | GGATC | 2 cut(s) | 174, 415 |
| AoxI | GGCC | 1 cut(s) | 116 |
| ApeKI | GCWGC | 1 cut(s) | 317 |
| Bbv12I | GWGCWC | 1 cut(s) | 143 |
| BbvI | GCAGC | 1 cut(s) | 329 |
| BfaI | CTAG | 3 cut(s) | 53, 321, 404 |
| BfmI | CTRYAG | 4 cut(s) | 40, 60, 120, 431 |
| BfuAI | ACCTGC | 1 cut(s) | 435 |
| BisI | GCNGC | 1 cut(s) | 318 |
| BlsI | GCNGC | 1 cut(s) | 319 |
| BmiI | GGNNCC | 1 cut(s) | 34 |
| BmsI | GCATC | 1 cut(s) | 12 |
| Bpu10I | CCTNAGC | 1 cut(s) | 252 |
| BsaJI | CCNNGG | 1 cut(s) | 330 |
| Bse1I | ACTGG | 1 cut(s) | 34 |
| BseDI | CCNNGG | 1 cut(s) | 330 |
| BseGI | GGATG | 2 cut(s) | 204, 399 |
| BseMII | CTCAG | 2 cut(s) | 99, 243 |
| BseNI | ACTGG | 1 cut(s) | 34 |
| BseXI | GCAGC | 1 cut(s) | 329 |
| BshFI | GGCC | 1 cut(s) | 118 |
| BsiHKAI | GWGCWC | 1 cut(s) | 143 |
| BsmI | GAATGC | 1 cut(s) | 84 |
| BsnI | GGCC | 1 cut(s) | 118 |
| Bsp1286I | GDGCHC | 1 cut(s) | 143 |
| Bsp143I | GATC | 3 cut(s) | 157, 179, 407 |
| BspANI | GGCC | 1 cut(s) | 118 |
| BspCNI | CTCAG | 2 cut(s) | 100, 244 |
| BspHI | TCATGA | 1 cut(s) | 340 |
| BspLI | GGNNCC | 1 cut(s) | 34 |
| BspMAI | CTGCAG | 1 cut(s) | 124 |
| BspMI | ACCTGC | 1 cut(s) | 435 |
| BspPI | GGATC | 2 cut(s) | 174, 415 |
| BsrI | ACTGG | 1 cut(s) | 34 |
| BssECI | CCNNGG | 1 cut(s) | 330 |
| BssMI | GATC | 3 cut(s) | 157, 179, 407 |
| BssT1I | CCWWGG | 1 cut(s) | 330 |
| Bst4CI | ACNGT | 3 cut(s) | 14, 71, 229 |
| BstC8I | GCNNGC | 1 cut(s) | 120 |
| BstDEI | CTNAG | 5 cut(s) | 108, 195, 222, 252, 288 |
| BstF5I | GGATG | 2 cut(s) | 204, 399 |
| BstKTI | GATC | 3 cut(s) | 160, 182, 410 |
| BstMBI | GATC | 3 cut(s) | 157, 179, 407 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 317 |
| BstSFI | CTRYAG | 4 cut(s) | 40, 60, 120, 431 |
| BstV1I | GCAGC | 1 cut(s) | 329 |
| BstX2I | RGATCY | 1 cut(s) | 179 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 190 |
| BstYI | RGATCY | 1 cut(s) | 179 |
| BsuRI | GGCC | 1 cut(s) | 118 |
| BtsCI | GGATG | 2 cut(s) | 204, 399 |
| BtsIMutI | CAGTG | 1 cut(s) | 19 |
| BveI | ACCTGC | 1 cut(s) | 435 |
| Cac8I | GCNNGC | 1 cut(s) | 120 |
| CciI | TCATGA | 1 cut(s) | 340 |
| Csp6I | GTAC | 1 cut(s) | 352 |
| CviAII | CATG | 3 cut(s) | 83, 341, 355 |
| CviJI | RGCY | 8 cut(s) | 52, 118, 194, 256, 320, 325, 403, 436 |
| CviKI_1 | RGCY | 8 cut(s) | 52, 118, 194, 256, 320, 325, 403, 436 |
| CviQI | GTAC | 1 cut(s) | 352 |
| DdeI | CTNAG | 5 cut(s) | 108, 195, 222, 252, 288 |
| DpnI | GATC | 3 cut(s) | 159, 181, 409 |
| DpnII | GATC | 3 cut(s) | 157, 179, 407 |
| DraI | TTTAAA | 1 cut(s) | 295 |
| Eco130I | CCWWGG | 1 cut(s) | 330 |
| Eco147I | AGGCCT | 1 cut(s) | 118 |
| EcoT14I | CCWWGG | 1 cut(s) | 330 |
| EcoT22I | ATGCAT | 1 cut(s) | 84 |
| ErhI | CCWWGG | 1 cut(s) | 330 |
| FaeI | CATG | 3 cut(s) | 86, 344, 358 |
| FatI | CATG | 3 cut(s) | 82, 340, 354 |
| Fnu4HI | GCNGC | 1 cut(s) | 318 |
| FokI | GGATG | 2 cut(s) | 191, 406 |
| Fsp4HI | GCNGC | 1 cut(s) | 318 |
| FspBI | CTAG | 3 cut(s) | 53, 321, 404 |
| GluI | GCNGC | 1 cut(s) | 318 |
| HaeIII | GGCC | 1 cut(s) | 118 |
| Hin1II | CATG | 3 cut(s) | 86, 344, 358 |
| HinfI | GANTC | 1 cut(s) | 56 |
| Hpy188I | TCNGA | 2 cut(s) | 209, 265 |
| Hpy188III | TCNNGA | 2 cut(s) | 19, 341 |
| HpyCH4III | ACNGT | 3 cut(s) | 14, 71, 229 |
| HpyCH4V | TGCA | 2 cut(s) | 82, 122 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 317 |
| HpyF3I | CTNAG | 5 cut(s) | 108, 195, 222, 252, 288 |
| Hsp92II | CATG | 3 cut(s) | 86, 344, 358 |
| Kzo9I | GATC | 3 cut(s) | 157, 179, 407 |
| LpnPI | CCDG | 4 cut(s) | 15, 132, 264, 348 |
| Lsp1109I | GCAGC | 1 cut(s) | 329 |
| LweI | GCATC | 1 cut(s) | 12 |
| MaeI | CTAG | 3 cut(s) | 53, 321, 404 |
| MalI | GATC | 3 cut(s) | 159, 181, 409 |
| MboI | GATC | 3 cut(s) | 157, 179, 407 |
| MboII | GAAGA | 2 cut(s) | 257, 427 |
| MflI | RGATCY | 1 cut(s) | 179 |
| MhlI | GDGCHC | 1 cut(s) | 143 |
| MnlI | CCTC | 3 cut(s) | 103, 212, 390 |
| Mph1103I | ATGCAT | 1 cut(s) | 84 |
| MseI | TTAA | 1 cut(s) | 294 |
| Mva1269I | GAATGC | 1 cut(s) | 84 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 317 |
| NdeII | GATC | 3 cut(s) | 157, 179, 407 |
| NlaIII | CATG | 3 cut(s) | 86, 344, 358 |
| NlaIV | GGNNCC | 1 cut(s) | 34 |
| NsiI | ATGCAT | 1 cut(s) | 84 |
| PagI | TCATGA | 1 cut(s) | 340 |
| PceI | AGGCCT | 1 cut(s) | 118 |
| PctI | GAATGC | 1 cut(s) | 84 |
| PfeI | GAWTC | 1 cut(s) | 56 |
| PkrI | GCNGC | 1 cut(s) | 319 |
| PspN4I | GGNNCC | 1 cut(s) | 34 |
| PstI | CTGCAG | 1 cut(s) | 124 |
| PsuI | RGATCY | 1 cut(s) | 179 |
| RsaI | GTAC | 1 cut(s) | 353 |
| RsaNI | GTAC | 1 cut(s) | 352 |
| SaqAI | TTAA | 1 cut(s) | 294 |
| SatI | GCNGC | 1 cut(s) | 318 |
| Sau3AI | GATC | 3 cut(s) | 157, 179, 407 |
| SduI | GDGCHC | 1 cut(s) | 143 |
| SetI | ASST | 7 cut(s) | 204, 253, 258, 286, 322, 405, 429 |
| SfaNI | GCATC | 1 cut(s) | 12 |
| SfcI | CTRYAG | 4 cut(s) | 40, 60, 120, 431 |
| SseBI | AGGCCT | 1 cut(s) | 118 |
| SspMI | CTAG | 3 cut(s) | 53, 321, 404 |
| StuI | AGGCCT | 1 cut(s) | 118 |
| StyI | CCWWGG | 1 cut(s) | 330 |
| TaaI | ACNGT | 3 cut(s) | 14, 71, 229 |
| TatI | WGTACW | 1 cut(s) | 351 |
| TfiI | GAWTC | 1 cut(s) | 56 |
| Tru1I | TTAA | 1 cut(s) | 294 |
| Tru9I | TTAA | 1 cut(s) | 294 |
| TscAI | CASTG | 1 cut(s) | 19 |
| TseI | GCWGC | 1 cut(s) | 317 |
| TspDTI | ATGAA | 4 cut(s) | 17, 99, 147, 329 |
| TspRI | CASTG | 1 cut(s) | 19 |
| XspI | CTAG | 3 cut(s) | 53, 321, 404 |
| Zsp2I | ATGCAT | 1 cut(s) | 84 |