gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 40 |
| AcsI | RAATTY | 2 cut(s) | 78, 237 |
| AfaI | GTAC | 1 cut(s) | 290 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 118 |
| AgsI | TTSAA | 4 cut(s) | 20, 65, 70, 271 |
| AjnI | CCWGG | 1 cut(s) | 72 |
| AluBI | AGCT | 1 cut(s) | 128 |
| AluI | AGCT | 1 cut(s) | 128 |
| Alw26I | GTCTC | 1 cut(s) | 140 |
| AlwI | GGATC | 1 cut(s) | 40 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 248 |
| AoxI | GGCC | 1 cut(s) | 189 |
| ApeKI | GCWGC | 1 cut(s) | 128 |
| ApoI | RAATTY | 2 cut(s) | 78, 237 |
| AspS9I | GGNCC | 1 cut(s) | 109 |
| AvaII | GGWCC | 1 cut(s) | 109 |
| BbsI | GAAGAC | 1 cut(s) | 63 |
| BbvI | GCAGC | 1 cut(s) | 115 |
| BciT130I | CCWGG | 1 cut(s) | 74 |
| BclI | TGATCA | 1 cut(s) | 91 |
| BcoDI | GTCTC | 1 cut(s) | 140 |
| BfmI | CTRYAG | 1 cut(s) | 164 |
| BisI | GCNGC | 1 cut(s) | 129 |
| BlsI | GCNGC | 1 cut(s) | 130 |
| Bme1390I | CCNGG | 1 cut(s) | 74 |
| Bme18I | GGWCC | 1 cut(s) | 109 |
| BmgT120I | GGNCC | 1 cut(s) | 109 |
| BmiI | GGNNCC | 2 cut(s) | 111, 123 |
| BmrFI | CCNGG | 1 cut(s) | 74 |
| BmsI | GCATC | 2 cut(s) | 15, 211 |
| BpiI | GAAGAC | 1 cut(s) | 63 |
| Bpu10I | CCTNAGC | 1 cut(s) | 101 |
| BsaJI | CCNNGG | 1 cut(s) | 73 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 118 |
| BseBI | CCWGG | 1 cut(s) | 74 |
| BseDI | CCNNGG | 1 cut(s) | 73 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 118 |
| BseXI | GCAGC | 1 cut(s) | 115 |
| BshFI | GGCC | 1 cut(s) | 191 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 118 |
| BsmAI | GTCTC | 1 cut(s) | 140 |
| BsnI | GGCC | 1 cut(s) | 191 |
| Bsp143I | GATC | 3 cut(s) | 32, 91, 195 |
| BspANI | GGCC | 1 cut(s) | 191 |
| BspLI | GGNNCC | 2 cut(s) | 111, 123 |
| BspPI | GGATC | 1 cut(s) | 40 |
| BssECI | CCNNGG | 1 cut(s) | 73 |
| BssMI | GATC | 3 cut(s) | 32, 91, 195 |
| Bst2UI | CCWGG | 1 cut(s) | 74 |
| Bst4CI | ACNGT | 1 cut(s) | 168 |
| BstC8I | GCNNGC | 2 cut(s) | 126, 139 |
| BstDEI | CTNAG | 2 cut(s) | 101, 150 |
| BstKTI | GATC | 3 cut(s) | 35, 94, 198 |
| BstMAI | GTCTC | 1 cut(s) | 140 |
| BstMBI | GATC | 3 cut(s) | 32, 91, 195 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 134 |
| BstNI | CCWGG | 1 cut(s) | 74 |
| BstSCI | CCNGG | 1 cut(s) | 72 |
| BstSFI | CTRYAG | 1 cut(s) | 164 |
| BstV1I | GCAGC | 1 cut(s) | 115 |
| BstV2I | GAAGAC | 1 cut(s) | 63 |
| BsuRI | GGCC | 1 cut(s) | 191 |
| BtsI | GCAGTG | 1 cut(s) | 231 |
| BtsIMutI | CAGTG | 2 cut(s) | 173, 231 |
| Cac8I | GCNNGC | 2 cut(s) | 126, 139 |
| CaiI | CAGNNNCTG | 1 cut(s) | 248 |
| Cfr13I | GGNCC | 1 cut(s) | 109 |
| Csp6I | GTAC | 1 cut(s) | 289 |
| CviAII | CATG | 3 cut(s) | 95, 202, 214 |
| CviJI | RGCY | 4 cut(s) | 124, 128, 178, 191 |
| CviKI_1 | RGCY | 4 cut(s) | 124, 128, 178, 191 |
| CviQI | GTAC | 1 cut(s) | 289 |
| DdeI | CTNAG | 2 cut(s) | 101, 150 |
| DpnI | GATC | 3 cut(s) | 34, 93, 197 |
| DpnII | GATC | 3 cut(s) | 32, 91, 195 |
| Eco47I | GGWCC | 1 cut(s) | 109 |
| EcoO109I | RGGNCCY | 1 cut(s) | 109 |
| EcoRI | GAATTC | 1 cut(s) | 237 |
| EcoRII | CCWGG | 1 cut(s) | 72 |
| FaeI | CATG | 3 cut(s) | 98, 205, 217 |
| FaiI | YATR | 4 cut(s) | 96, 174, 203, 215 |
| FatI | CATG | 3 cut(s) | 94, 201, 213 |
| FbaI | TGATCA | 1 cut(s) | 91 |
| Fnu4HI | GCNGC | 1 cut(s) | 129 |
| Fsp4HI | GCNGC | 1 cut(s) | 129 |
| GluI | GCNGC | 1 cut(s) | 129 |
| HaeIII | GGCC | 1 cut(s) | 191 |
| Hin1II | CATG | 3 cut(s) | 98, 205, 217 |
| HinfI | GANTC | 1 cut(s) | 245 |
| Hpy188I | TCNGA | 2 cut(s) | 250, 299 |
| Hpy188III | TCNNGA | 1 cut(s) | 242 |
| HpyAV | CCTTC | 2 cut(s) | 46, 223 |
| HpyCH4III | ACNGT | 1 cut(s) | 168 |
| HpyCH4V | TGCA | 4 cut(s) | 137, 201, 224, 257 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 134 |
| HpyF3I | CTNAG | 2 cut(s) | 101, 150 |
| Hsp92II | CATG | 3 cut(s) | 98, 205, 217 |
| Ksp22I | TGATCA | 1 cut(s) | 91 |
| Kzo9I | GATC | 3 cut(s) | 32, 91, 195 |
| LmnI | GCTCC | 1 cut(s) | 121 |
| LpnPI | CCDG | 5 cut(s) | 59, 86, 104, 138, 255 |
| Lsp1109I | GCAGC | 1 cut(s) | 115 |
| LweI | GCATC | 2 cut(s) | 15, 211 |
| MaeIII | GTNAC | 1 cut(s) | 11 |
| MalI | GATC | 3 cut(s) | 34, 93, 197 |
| MboI | GATC | 3 cut(s) | 32, 91, 195 |
| MboII | GAAGA | 2 cut(s) | 68, 217 |
| MluCI | AATT | 3 cut(s) | 65, 78, 237 |
| MnlI | CCTC | 2 cut(s) | 100, 227 |
| MseI | TTAA | 1 cut(s) | 27 |
| MspA1I | CMGCKG | 1 cut(s) | 128 |
| MspR9I | CCNGG | 1 cut(s) | 74 |
| MvaI | CCWGG | 1 cut(s) | 74 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 134 |
| NdeII | GATC | 3 cut(s) | 32, 91, 195 |
| NlaIII | CATG | 3 cut(s) | 98, 205, 217 |
| NlaIV | GGNNCC | 2 cut(s) | 111, 123 |
| PfeI | GAWTC | 1 cut(s) | 245 |
| PkrI | GCNGC | 1 cut(s) | 130 |
| PpuMI | RGGWCCY | 1 cut(s) | 109 |
| Psp5II | RGGWCCY | 1 cut(s) | 109 |
| Psp6I | CCWGG | 1 cut(s) | 72 |
| PspGI | CCWGG | 1 cut(s) | 72 |
| PspN4I | GGNNCC | 2 cut(s) | 111, 123 |
| PspPI | GGNCC | 1 cut(s) | 109 |
| PspPPI | RGGWCCY | 1 cut(s) | 109 |
| PstNI | CAGNNNCTG | 1 cut(s) | 248 |
| PvuII | CAGCTG | 1 cut(s) | 128 |
| RsaI | GTAC | 1 cut(s) | 290 |
| RsaNI | GTAC | 1 cut(s) | 289 |
| SaqAI | TTAA | 1 cut(s) | 27 |
| SatI | GCNGC | 1 cut(s) | 129 |
| Sau3AI | GATC | 3 cut(s) | 32, 91, 195 |
| Sau96I | GGNCC | 1 cut(s) | 109 |
| ScrFI | CCNGG | 1 cut(s) | 74 |
| SetI | ASST | 3 cut(s) | 75, 130, 297 |
| SfaNI | GCATC | 2 cut(s) | 15, 211 |
| SfcI | CTRYAG | 1 cut(s) | 164 |
| SinI | GGWCC | 1 cut(s) | 109 |
| Sse9I | AATT | 3 cut(s) | 65, 78, 237 |
| StyD4I | CCNGG | 1 cut(s) | 72 |
| TaaI | ACNGT | 1 cut(s) | 168 |
| TasI | AATT | 3 cut(s) | 65, 78, 237 |
| TatI | WGTACW | 1 cut(s) | 288 |
| TfiI | GAWTC | 1 cut(s) | 245 |
| Tru1I | TTAA | 1 cut(s) | 27 |
| Tru9I | TTAA | 1 cut(s) | 27 |
| TscAI | CASTG | 2 cut(s) | 173, 231 |
| TseI | GCWGC | 1 cut(s) | 128 |
| TspDTI | ATGAA | 1 cut(s) | 218 |
| TspRI | CASTG | 2 cut(s) | 173, 231 |
| VpaK11BI | GGWCC | 1 cut(s) | 109 |
| XapI | RAATTY | 2 cut(s) | 78, 237 |