gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 10 |
| Acc36I | ACCTGC | 2 cut(s) | 10, 175 |
| AclWI | GGATC | 1 cut(s) | 155 |
| AcoI | YGGCCR | 1 cut(s) | 267 |
| AcsI | RAATTY | 1 cut(s) | 388 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 369 |
| AgsI | TTSAA | 2 cut(s) | 255, 295 |
| AluBI | AGCT | 3 cut(s) | 176, 223, 260 |
| AluI | AGCT | 3 cut(s) | 176, 223, 260 |
| AlwI | GGATC | 1 cut(s) | 155 |
| AoxI | GGCC | 2 cut(s) | 267, 281 |
| ApeKI | GCWGC | 1 cut(s) | 260 |
| ApoI | RAATTY | 1 cut(s) | 388 |
| BalI | TGGCCA | 1 cut(s) | 269 |
| BbvI | GCAGC | 1 cut(s) | 247 |
| BccI | CCATC | 1 cut(s) | 131 |
| BfmI | CTRYAG | 2 cut(s) | 171, 261 |
| BfuAI | ACCTGC | 2 cut(s) | 10, 175 |
| BisI | GCNGC | 1 cut(s) | 261 |
| BlsI | GCNGC | 1 cut(s) | 262 |
| BmiI | GGNNCC | 1 cut(s) | 165 |
| BpuEI | CTTGAG | 1 cut(s) | 209 |
| BsaJI | CCNNGG | 1 cut(s) | 270 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 369 |
| Bse118I | RCCGGY | 1 cut(s) | 341 |
| Bse1I | ACTGG | 3 cut(s) | 75, 104, 359 |
| BseDI | CCNNGG | 1 cut(s) | 270 |
| BseGI | GGATG | 2 cut(s) | 19, 139 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 369 |
| BseNI | ACTGG | 3 cut(s) | 75, 104, 359 |
| BseRI | GAGGAG | 1 cut(s) | 398 |
| BseXI | GCAGC | 1 cut(s) | 247 |
| BsgI | GTGCAG | 1 cut(s) | 322 |
| BshFI | GGCC | 2 cut(s) | 269, 283 |
| BsiSI | CCGG | 1 cut(s) | 342 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 369 |
| BsmI | GAATGC | 1 cut(s) | 40 |
| BsnI | GGCC | 2 cut(s) | 269, 283 |
| Bsp143I | GATC | 1 cut(s) | 147 |
| BspANI | GGCC | 2 cut(s) | 269, 283 |
| BspLI | GGNNCC | 1 cut(s) | 165 |
| BspMAI | CTGCAG | 1 cut(s) | 265 |
| BspMI | ACCTGC | 2 cut(s) | 10, 175 |
| BspPI | GGATC | 1 cut(s) | 155 |
| BsrFI | RCCGGY | 1 cut(s) | 341 |
| BsrI | ACTGG | 3 cut(s) | 75, 104, 359 |
| BssAI | RCCGGY | 1 cut(s) | 341 |
| BssECI | CCNNGG | 1 cut(s) | 270 |
| BssMI | GATC | 1 cut(s) | 147 |
| BssT1I | CCWWGG | 1 cut(s) | 270 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 25 |
| BstDEI | CTNAG | 2 cut(s) | 68, 246 |
| BstF5I | GGATG | 2 cut(s) | 19, 139 |
| BstKTI | GATC | 1 cut(s) | 150 |
| BstMBI | GATC | 1 cut(s) | 147 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 25, 266, 306 |
| BstSFI | CTRYAG | 2 cut(s) | 171, 261 |
| BstV1I | GCAGC | 1 cut(s) | 247 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 130 |
| BsuRI | GGCC | 2 cut(s) | 269, 283 |
| BtsCI | GGATG | 2 cut(s) | 19, 139 |
| BtsI | GCAGTG | 2 cut(s) | 35, 270 |
| BtsIMutI | CAGTG | 2 cut(s) | 35, 270 |
| BveI | ACCTGC | 2 cut(s) | 10, 175 |
| Cfr10I | RCCGGY | 1 cut(s) | 341 |
| CviAII | CATG | 1 cut(s) | 325 |
| DdeI | CTNAG | 2 cut(s) | 68, 246 |
| DpnI | GATC | 1 cut(s) | 149 |
| DpnII | GATC | 1 cut(s) | 147 |
| EaeI | YGGCCR | 1 cut(s) | 267 |
| Eco130I | CCWWGG | 1 cut(s) | 270 |
| EcoRI | GAATTC | 1 cut(s) | 388 |
| EcoT14I | CCWWGG | 1 cut(s) | 270 |
| ErhI | CCWWGG | 1 cut(s) | 270 |
| FaeI | CATG | 1 cut(s) | 328 |
| FaiI | YATR | 7 cut(s) | 33, 119, 179, 242, 326, 348, 378 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 287, 319 |
| FatI | CATG | 1 cut(s) | 324 |
| Fnu4HI | GCNGC | 1 cut(s) | 261 |
| FokI | GGATG | 2 cut(s) | 26, 146 |
| Fsp4HI | GCNGC | 1 cut(s) | 261 |
| GluI | GCNGC | 1 cut(s) | 261 |
| HaeIII | GGCC | 2 cut(s) | 269, 283 |
| HapII | CCGG | 1 cut(s) | 342 |
| Hin1II | CATG | 1 cut(s) | 328 |
| HinfI | GANTC | 1 cut(s) | 373 |
| HpaII | CCGG | 1 cut(s) | 342 |
| HpyCH4V | TGCA | 6 cut(s) | 28, 35, 40, 263, 309, 339 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 25, 266, 306 |
| HpyF3I | CTNAG | 2 cut(s) | 68, 246 |
| Hsp92II | CATG | 1 cut(s) | 328 |
| Kzo9I | GATC | 1 cut(s) | 147 |
| LpnPI | CCDG | 7 cut(s) | 5, 85, 88, 180, 265, 340, 355 |
| Lsp1109I | GCAGC | 1 cut(s) | 247 |
| MaeIII | GTNAC | 1 cut(s) | 77 |
| MalI | GATC | 1 cut(s) | 149 |
| MboI | GATC | 1 cut(s) | 147 |
| MboII | GAAGA | 1 cut(s) | 167 |
| MlsI | TGGCCA | 1 cut(s) | 269 |
| MluCI | AATT | 2 cut(s) | 82, 388 |
| MluNI | TGGCCA | 1 cut(s) | 269 |
| MnlI | CCTC | 3 cut(s) | 130, 194, 376 |
| Mox20I | TGGCCA | 1 cut(s) | 269 |
| MscI | TGGCCA | 1 cut(s) | 269 |
| MseI | TTAA | 1 cut(s) | 189 |
| MslI | CAYNNNNRTG | 1 cut(s) | 128 |
| Msp20I | TGGCCA | 1 cut(s) | 269 |
| MspA1I | CMGCKG | 1 cut(s) | 260 |
| MspI | CCGG | 1 cut(s) | 342 |
| Mva1269I | GAATGC | 1 cut(s) | 40 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 25, 266, 306 |
| NdeII | GATC | 1 cut(s) | 147 |
| NlaIII | CATG | 1 cut(s) | 328 |
| NlaIV | GGNNCC | 1 cut(s) | 165 |
| PaqCI | CACCTGC | 1 cut(s) | 10 |
| PctI | GAATGC | 1 cut(s) | 40 |
| PfeI | GAWTC | 1 cut(s) | 373 |
| PkrI | GCNGC | 1 cut(s) | 262 |
| PspN4I | GGNNCC | 1 cut(s) | 165 |
| PstI | CTGCAG | 1 cut(s) | 265 |
| PvuII | CAGCTG | 1 cut(s) | 260 |
| RseI | CAYNNNNRTG | 1 cut(s) | 128 |
| SaqAI | TTAA | 1 cut(s) | 189 |
| SatI | GCNGC | 1 cut(s) | 261 |
| Sau3AI | GATC | 1 cut(s) | 147 |
| SetI | ASST | 8 cut(s) | 24, 52, 169, 178, 186, 225, 262, 293 |
| SfcI | CTRYAG | 2 cut(s) | 171, 261 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 128 |
| SmlI | CTYRAG | 1 cut(s) | 224 |
| SmoI | CTYRAG | 1 cut(s) | 224 |
| Sse9I | AATT | 2 cut(s) | 82, 388 |
| StyI | CCWWGG | 1 cut(s) | 270 |
| TasI | AATT | 2 cut(s) | 82, 388 |
| TfiI | GAWTC | 1 cut(s) | 373 |
| Tru1I | TTAA | 1 cut(s) | 189 |
| Tru9I | TTAA | 1 cut(s) | 189 |
| TscAI | CASTG | 2 cut(s) | 42, 270 |
| TseI | GCWGC | 1 cut(s) | 260 |
| TspDTI | ATGAA | 3 cut(s) | 126, 341, 365 |
| TspRI | CASTG | 2 cut(s) | 42, 270 |
| XapI | RAATTY | 1 cut(s) | 388 |