gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 192 |
| AcsI | RAATTY | 1 cut(s) | 290 |
| AgsI | TTSAA | 1 cut(s) | 144 |
| AjnI | CCWGG | 2 cut(s) | 47, 170 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 317 |
| AoxI | GGCC | 1 cut(s) | 192 |
| ApeKI | GCWGC | 1 cut(s) | 317 |
| ApoI | RAATTY | 1 cut(s) | 290 |
| BalI | TGGCCA | 1 cut(s) | 194 |
| BbsI | GAAGAC | 1 cut(s) | 282 |
| BbvI | GCAGC | 1 cut(s) | 304 |
| BciT130I | CCWGG | 2 cut(s) | 49, 172 |
| BfaI | CTAG | 1 cut(s) | 98 |
| BisI | GCNGC | 1 cut(s) | 318 |
| BlsI | GCNGC | 1 cut(s) | 319 |
| Bme1390I | CCNGG | 2 cut(s) | 49, 172 |
| BmrFI | CCNGG | 2 cut(s) | 49, 172 |
| BmsI | GCATC | 2 cut(s) | 12, 69 |
| BpiI | GAAGAC | 1 cut(s) | 282 |
| BpmI | CTGGAG | 1 cut(s) | 70 |
| BpuEI | CTTGAG | 1 cut(s) | 140 |
| Bse1I | ACTGG | 1 cut(s) | 34 |
| BseBI | CCWGG | 2 cut(s) | 49, 172 |
| BseGI | GGATG | 1 cut(s) | 118 |
| BseMII | CTCAG | 1 cut(s) | 273 |
| BseNI | ACTGG | 1 cut(s) | 34 |
| BseXI | GCAGC | 1 cut(s) | 304 |
| BshFI | GGCC | 1 cut(s) | 194 |
| BsnI | GGCC | 1 cut(s) | 194 |
| BspANI | GGCC | 1 cut(s) | 194 |
| BspCNI | CTCAG | 1 cut(s) | 274 |
| BspHI | TCATGA | 1 cut(s) | 106 |
| BsrI | ACTGG | 1 cut(s) | 34 |
| Bst2UI | CCWGG | 2 cut(s) | 49, 172 |
| Bst4CI | ACNGT | 1 cut(s) | 229 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 317 |
| BstDEI | CTNAG | 3 cut(s) | 147, 282, 330 |
| BstF5I | GGATG | 1 cut(s) | 118 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 167, 317 |
| BstNI | CCWGG | 2 cut(s) | 49, 172 |
| BstSCI | CCNGG | 2 cut(s) | 47, 170 |
| BstV1I | GCAGC | 1 cut(s) | 304 |
| BstV2I | GAAGAC | 1 cut(s) | 282 |
| BsuRI | GGCC | 1 cut(s) | 194 |
| BtsCI | GGATG | 1 cut(s) | 118 |
| BtsIMutI | CAGTG | 3 cut(s) | 27, 225, 279 |
| CaiI | CAGNNNCTG | 1 cut(s) | 317 |
| CciI | TCATGA | 1 cut(s) | 106 |
| CviAII | CATG | 2 cut(s) | 83, 107 |
| CviJI | RGCY | 5 cut(s) | 47, 170, 194, 260, 317 |
| CviKI_1 | RGCY | 5 cut(s) | 47, 170, 194, 260, 317 |
| DdeI | CTNAG | 3 cut(s) | 147, 282, 330 |
| DraI | TTTAAA | 2 cut(s) | 166, 295 |
| EaeI | YGGCCR | 1 cut(s) | 192 |
| EcoRII | CCWGG | 2 cut(s) | 47, 170 |
| EcoT22I | ATGCAT | 1 cut(s) | 84 |
| FaeI | CATG | 2 cut(s) | 86, 110 |
| FaiI | YATR | 8 cut(s) | 72, 74, 84, 92, 108, 218, 270, 272 |
| FatI | CATG | 2 cut(s) | 82, 106 |
| Fnu4HI | GCNGC | 1 cut(s) | 318 |
| FokI | GGATG | 1 cut(s) | 125 |
| Fsp4HI | GCNGC | 1 cut(s) | 318 |
| FspBI | CTAG | 1 cut(s) | 98 |
| GluI | GCNGC | 1 cut(s) | 318 |
| GsuI | CTGGAG | 1 cut(s) | 70 |
| HaeIII | GGCC | 1 cut(s) | 194 |
| Hin1II | CATG | 2 cut(s) | 86, 110 |
| HinfI | GANTC | 1 cut(s) | 56 |
| Hpy188I | TCNGA | 1 cut(s) | 223 |
| Hpy188III | TCNNGA | 1 cut(s) | 107 |
| HpyCH4III | ACNGT | 1 cut(s) | 229 |
| HpyCH4V | TGCA | 2 cut(s) | 82, 320 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 167, 317 |
| HpyF3I | CTNAG | 3 cut(s) | 147, 282, 330 |
| Hsp92II | CATG | 2 cut(s) | 86, 110 |
| LpnPI | CCDG | 6 cut(s) | 15, 34, 61, 157, 184, 264 |
| Lsp1109I | GCAGC | 1 cut(s) | 304 |
| LweI | GCATC | 2 cut(s) | 12, 69 |
| MaeI | CTAG | 1 cut(s) | 98 |
| MboII | GAAGA | 2 cut(s) | 257, 287 |
| MlsI | TGGCCA | 1 cut(s) | 194 |
| MluCI | AATT | 1 cut(s) | 290 |
| MluNI | TGGCCA | 1 cut(s) | 194 |
| MnlI | CCTC | 6 cut(s) | 17, 103, 115, 145, 227, 307 |
| Mox20I | TGGCCA | 1 cut(s) | 194 |
| Mph1103I | ATGCAT | 1 cut(s) | 84 |
| MscI | TGGCCA | 1 cut(s) | 194 |
| MseI | TTAA | 4 cut(s) | 128, 156, 165, 294 |
| MslI | CAYNNNNRTG | 1 cut(s) | 111 |
| Msp20I | TGGCCA | 1 cut(s) | 194 |
| MspR9I | CCNGG | 2 cut(s) | 49, 172 |
| MvaI | CCWGG | 2 cut(s) | 49, 172 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 167, 317 |
| NlaIII | CATG | 2 cut(s) | 86, 110 |
| NsiI | ATGCAT | 1 cut(s) | 84 |
| PagI | TCATGA | 1 cut(s) | 106 |
| PfeI | GAWTC | 1 cut(s) | 56 |
| PflFI | GACNNNGTC | 1 cut(s) | 98 |
| PkrI | GCNGC | 1 cut(s) | 319 |
| Psp6I | CCWGG | 2 cut(s) | 47, 170 |
| PspGI | CCWGG | 2 cut(s) | 47, 170 |
| PstNI | CAGNNNCTG | 1 cut(s) | 317 |
| PsyI | GACNNNGTC | 1 cut(s) | 98 |
| RseI | CAYNNNNRTG | 1 cut(s) | 111 |
| SaqAI | TTAA | 4 cut(s) | 128, 156, 165, 294 |
| SatI | GCNGC | 1 cut(s) | 318 |
| ScrFI | CCNGG | 2 cut(s) | 49, 172 |
| SetI | ASST | 5 cut(s) | 9, 99, 156, 238, 253 |
| SfaNI | GCATC | 2 cut(s) | 12, 69 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 111 |
| SmlI | CTYRAG | 1 cut(s) | 119 |
| SmoI | CTYRAG | 1 cut(s) | 119 |
| Sse9I | AATT | 1 cut(s) | 290 |
| SspMI | CTAG | 1 cut(s) | 98 |
| StyD4I | CCNGG | 2 cut(s) | 47, 170 |
| TaaI | ACNGT | 1 cut(s) | 229 |
| TasI | AATT | 1 cut(s) | 290 |
| TfiI | GAWTC | 1 cut(s) | 56 |
| Tru1I | TTAA | 4 cut(s) | 128, 156, 165, 294 |
| Tru9I | TTAA | 4 cut(s) | 128, 156, 165, 294 |
| TscAI | CASTG | 3 cut(s) | 34, 232, 286 |
| TseI | GCWGC | 1 cut(s) | 317 |
| TspDTI | ATGAA | 3 cut(s) | 17, 95, 129 |
| TspRI | CASTG | 3 cut(s) | 34, 232, 286 |
| Tth111I | GACNNNGTC | 1 cut(s) | 98 |
| XapI | RAATTY | 1 cut(s) | 290 |
| XspI | CTAG | 1 cut(s) | 98 |
| Zsp2I | ATGCAT | 1 cut(s) | 84 |