gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 119 |
| AfaI | GTAC | 1 cut(s) | 137 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 41, 169 |
| AflII | CTTAAG | 1 cut(s) | 275 |
| AflIII | ACRYGT | 1 cut(s) | 72 |
| AhlI | ACTAGT | 1 cut(s) | 242 |
| AluBI | AGCT | 5 cut(s) | 104, 130, 218, 225, 283 |
| AluI | AGCT | 5 cut(s) | 104, 130, 218, 225, 283 |
| Alw21I | GWGCWC | 1 cut(s) | 132 |
| ApeKI | GCWGC | 1 cut(s) | 101 |
| ApoI | RAATTY | 1 cut(s) | 119 |
| AspS9I | GGNCC | 1 cut(s) | 160 |
| AvaII | GGWCC | 1 cut(s) | 160 |
| BanII | GRGCYC | 1 cut(s) | 132 |
| BbsI | GAAGAC | 1 cut(s) | 315 |
| Bbv12I | GWGCWC | 1 cut(s) | 132 |
| BbvCI | CCTCAGC | 1 cut(s) | 96 |
| BbvI | GCAGC | 1 cut(s) | 113 |
| BccI | CCATC | 2 cut(s) | 240, 299 |
| BclI | TGATCA | 1 cut(s) | 184 |
| BcuI | ACTAGT | 1 cut(s) | 242 |
| BfaI | CTAG | 3 cut(s) | 41, 215, 243 |
| BfrI | CTTAAG | 1 cut(s) | 275 |
| BisI | GCNGC | 1 cut(s) | 102 |
| BlsI | GCNGC | 1 cut(s) | 103 |
| Bme18I | GGWCC | 1 cut(s) | 160 |
| BmgT120I | GGNCC | 1 cut(s) | 160 |
| BmiI | GGNNCC | 2 cut(s) | 161, 272 |
| BpiI | GAAGAC | 1 cut(s) | 315 |
| Bpu10I | CCTNAGC | 1 cut(s) | 96 |
| BpuEI | CTTGAG | 1 cut(s) | 116 |
| BsaBI | GATNNNNATC | 1 cut(s) | 290 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 41, 169 |
| Bse1I | ACTGG | 2 cut(s) | 114, 145 |
| Bse8I | GATNNNNATC | 1 cut(s) | 290 |
| BseJI | GATNNNNATC | 1 cut(s) | 290 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 41, 169 |
| BseMII | CTCAG | 4 cut(s) | 87, 250, 269, 357 |
| BseNI | ACTGG | 2 cut(s) | 114, 145 |
| BseXI | GCAGC | 1 cut(s) | 113 |
| BsiHKAI | GWGCWC | 1 cut(s) | 132 |
| BslFI | GGGAC | 1 cut(s) | 173 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 41, 169 |
| BsmFI | GGGAC | 1 cut(s) | 173 |
| BsmI | GAATGC | 1 cut(s) | 204 |
| Bsp1286I | GDGCHC | 1 cut(s) | 132 |
| Bsp143I | GATC | 2 cut(s) | 37, 184 |
| BspCNI | CTCAG | 4 cut(s) | 88, 249, 268, 356 |
| BspHI | TCATGA | 1 cut(s) | 67 |
| BspLI | GGNNCC | 2 cut(s) | 161, 272 |
| BspTI | CTTAAG | 1 cut(s) | 275 |
| BsrI | ACTGG | 2 cut(s) | 114, 145 |
| BssMI | GATC | 2 cut(s) | 37, 184 |
| Bst4CI | ACNGT | 1 cut(s) | 13 |
| BstAFI | CTTAAG | 1 cut(s) | 275 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 210 |
| BstC8I | GCNNGC | 2 cut(s) | 198, 202 |
| BstDEI | CTNAG | 5 cut(s) | 96, 155, 236, 255, 343 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 39 |
| BstKTI | GATC | 2 cut(s) | 40, 187 |
| BstMBI | GATC | 2 cut(s) | 37, 184 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 101, 110, 210 |
| BstNSI | RCATGY | 2 cut(s) | 76, 200 |
| BstV1I | GCAGC | 1 cut(s) | 113 |
| BstV2I | GAAGAC | 1 cut(s) | 315 |
| BtsIMutI | CAGTG | 2 cut(s) | 138, 177 |
| Cac8I | GCNNGC | 2 cut(s) | 198, 202 |
| CciI | TCATGA | 1 cut(s) | 67 |
| Cfr13I | GGNCC | 1 cut(s) | 160 |
| Csp6I | GTAC | 1 cut(s) | 136 |
| CviAII | CATG | 7 cut(s) | 46, 68, 73, 169, 188, 197, 313 |
| CviQI | GTAC | 1 cut(s) | 136 |
| DdeI | CTNAG | 5 cut(s) | 96, 155, 236, 255, 343 |
| DpnI | GATC | 2 cut(s) | 39, 186 |
| DpnII | GATC | 2 cut(s) | 37, 184 |
| Ecl136II | GAGCTC | 1 cut(s) | 130 |
| Eco24I | GRGCYC | 1 cut(s) | 132 |
| Eco47I | GGWCC | 1 cut(s) | 160 |
| Eco53kI | GAGCTC | 1 cut(s) | 130 |
| EcoICRI | GAGCTC | 1 cut(s) | 130 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 39 |
| EcoO109I | RGGNCCY | 1 cut(s) | 160 |
| EcoT38I | GRGCYC | 1 cut(s) | 132 |
| FaeI | CATG | 7 cut(s) | 49, 71, 76, 172, 191, 200, 316 |
| FaqI | GGGAC | 1 cut(s) | 173 |
| FatI | CATG | 7 cut(s) | 45, 67, 72, 168, 187, 196, 312 |
| FbaI | TGATCA | 1 cut(s) | 184 |
| Fnu4HI | GCNGC | 1 cut(s) | 102 |
| FriOI | GRGCYC | 1 cut(s) | 132 |
| Fsp4HI | GCNGC | 1 cut(s) | 102 |
| FspBI | CTAG | 3 cut(s) | 41, 215, 243 |
| GluI | GCNGC | 1 cut(s) | 102 |
| Hin1II | CATG | 7 cut(s) | 49, 71, 76, 172, 191, 200, 316 |
| Hpy166II | GTNNAC | 2 cut(s) | 138, 349 |
| Hpy188I | TCNGA | 2 cut(s) | 7, 258 |
| Hpy188III | TCNNGA | 2 cut(s) | 68, 238 |
| Hpy8I | GTNNAC | 2 cut(s) | 138, 349 |
| HpyAV | CCTTC | 2 cut(s) | 253, 316 |
| HpyCH4III | ACNGT | 1 cut(s) | 13 |
| HpyCH4V | TGCA | 2 cut(s) | 196, 204 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 101, 110, 210 |
| HpyF3I | CTNAG | 5 cut(s) | 96, 155, 236, 255, 343 |
| Hsp92II | CATG | 7 cut(s) | 49, 71, 76, 172, 191, 200, 316 |
| Ksp22I | TGATCA | 1 cut(s) | 184 |
| Kzo9I | GATC | 2 cut(s) | 37, 184 |
| LmnI | GCTCC | 2 cut(s) | 270, 280 |
| LpnPI | CCDG | 5 cut(s) | 48, 95, 126, 214, 223 |
| Lsp1109I | GCAGC | 1 cut(s) | 113 |
| MaeI | CTAG | 3 cut(s) | 41, 215, 243 |
| MaeIII | GTNAC | 3 cut(s) | 86, 175, 245 |
| MalI | GATC | 2 cut(s) | 39, 186 |
| MboI | GATC | 2 cut(s) | 37, 184 |
| MboII | GAAGA | 2 cut(s) | 41, 320 |
| MhlI | GDGCHC | 1 cut(s) | 132 |
| MluCI | AATT | 1 cut(s) | 119 |
| MnlI | CCTC | 5 cut(s) | 11, 91, 173, 298, 352 |
| MseI | TTAA | 2 cut(s) | 123, 276 |
| MspCI | CTTAAG | 1 cut(s) | 275 |
| Mva1269I | GAATGC | 1 cut(s) | 204 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 101, 110, 210 |
| NdeII | GATC | 2 cut(s) | 37, 184 |
| NlaIII | CATG | 7 cut(s) | 49, 71, 76, 172, 191, 200, 316 |
| NlaIV | GGNNCC | 2 cut(s) | 161, 272 |
| NmuCI | GTSAC | 2 cut(s) | 86, 175 |
| NspI | RCATGY | 2 cut(s) | 76, 200 |
| PaeI | GCATGC | 1 cut(s) | 200 |
| PagI | TCATGA | 1 cut(s) | 67 |
| PciI | ACATGT | 1 cut(s) | 72 |
| PctI | GAATGC | 1 cut(s) | 204 |
| PkrI | GCNGC | 1 cut(s) | 103 |
| PpuMI | RGGWCCY | 1 cut(s) | 160 |
| PscI | ACATGT | 1 cut(s) | 72 |
| Psp124BI | GAGCTC | 1 cut(s) | 132 |
| Psp5II | RGGWCCY | 1 cut(s) | 160 |
| PspN4I | GGNNCC | 2 cut(s) | 161, 272 |
| PspPI | GGNCC | 1 cut(s) | 160 |
| PspPPI | RGGWCCY | 1 cut(s) | 160 |
| RsaI | GTAC | 1 cut(s) | 137 |
| RsaNI | GTAC | 1 cut(s) | 136 |
| SacI | GAGCTC | 1 cut(s) | 132 |
| SaqAI | TTAA | 2 cut(s) | 123, 276 |
| SatI | GCNGC | 1 cut(s) | 102 |
| Sau3AI | GATC | 2 cut(s) | 37, 184 |
| Sau96I | GGNCC | 1 cut(s) | 160 |
| SduI | GDGCHC | 1 cut(s) | 132 |
| SetI | ASST | 9 cut(s) | 22, 37, 106, 132, 165, 220, 227, 285, 344 |
| SinI | GGWCC | 1 cut(s) | 160 |
| SmlI | CTYRAG | 2 cut(s) | 131, 275 |
| SmoI | CTYRAG | 2 cut(s) | 131, 275 |
| SpeI | ACTAGT | 1 cut(s) | 242 |
| SphI | GCATGC | 1 cut(s) | 200 |
| Sse9I | AATT | 1 cut(s) | 119 |
| SspMI | CTAG | 3 cut(s) | 41, 215, 243 |
| SstI | GAGCTC | 1 cut(s) | 132 |
| TaaI | ACNGT | 1 cut(s) | 13 |
| TasI | AATT | 1 cut(s) | 119 |
| TatI | WGTACW | 1 cut(s) | 135 |
| Tru1I | TTAA | 2 cut(s) | 123, 276 |
| Tru9I | TTAA | 2 cut(s) | 123, 276 |
| TscAI | CASTG | 2 cut(s) | 145, 184 |
| TseFI | GTSAC | 2 cut(s) | 86, 175 |
| TseI | GCWGC | 1 cut(s) | 101 |
| Tsp45I | GTSAC | 2 cut(s) | 86, 175 |
| TspDTI | ATGAA | 1 cut(s) | 56 |
| TspRI | CASTG | 2 cut(s) | 145, 184 |
| Vha464I | CTTAAG | 1 cut(s) | 275 |
| VpaK11BI | GGWCC | 1 cut(s) | 160 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 39 |
| XapI | RAATTY | 1 cut(s) | 119 |
| XceI | RCATGY | 2 cut(s) | 76, 200 |
| XspI | CTAG | 3 cut(s) | 41, 215, 243 |