gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 761 |
| AcsI | RAATTY | 2 cut(s) | 578, 617 |
| AfaI | GTAC | 1 cut(s) | 73 |
| AgsI | TTSAA | 6 cut(s) | 37, 98, 574, 622, 747, 809 |
| AjnI | CCWGG | 1 cut(s) | 455 |
| AluBI | AGCT | 5 cut(s) | 209, 322, 343, 410, 527 |
| AluI | AGCT | 5 cut(s) | 209, 322, 343, 410, 527 |
| Alw21I | GWGCWC | 2 cut(s) | 387, 658 |
| Alw44I | GTGCAC | 1 cut(s) | 383 |
| ApaLI | GTGCAC | 1 cut(s) | 383 |
| ApeKI | GCWGC | 1 cut(s) | 40 |
| ApoI | RAATTY | 2 cut(s) | 578, 617 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 107, 139 |
| BaeGI | GKGCMC | 1 cut(s) | 387 |
| Bbv12I | GWGCWC | 2 cut(s) | 387, 658 |
| BbvI | GCAGC | 1 cut(s) | 52 |
| BccI | CCATC | 1 cut(s) | 281 |
| BciT130I | CCWGG | 1 cut(s) | 457 |
| BisI | GCNGC | 1 cut(s) | 41 |
| BlsI | GCNGC | 1 cut(s) | 42 |
| Bme1390I | CCNGG | 1 cut(s) | 457 |
| BmiI | GGNNCC | 1 cut(s) | 823 |
| BmrFI | CCNGG | 1 cut(s) | 457 |
| BmsI | GCATC | 2 cut(s) | 79, 309 |
| BpmI | CTGGAG | 1 cut(s) | 478 |
| Bpu10I | CCTNAGC | 2 cut(s) | 45, 192 |
| BpuEI | CTTGAG | 1 cut(s) | 302 |
| BsaBI | GATNNNNATC | 1 cut(s) | 479 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 236, 266 |
| Bse8I | GATNNNNATC | 1 cut(s) | 479 |
| BseBI | CCWGG | 1 cut(s) | 457 |
| BseJI | GATNNNNATC | 1 cut(s) | 479 |
| BseMII | CTCAG | 1 cut(s) | 360 |
| BseRI | GAGGAG | 1 cut(s) | 180 |
| BseSI | GKGCMC | 1 cut(s) | 387 |
| BseXI | GCAGC | 1 cut(s) | 52 |
| BseYI | CCCAGC | 1 cut(s) | 590 |
| BsiHKAI | GWGCWC | 2 cut(s) | 387, 658 |
| BslFI | GGGAC | 2 cut(s) | 24, 109 |
| BsmFI | GGGAC | 2 cut(s) | 24, 109 |
| BsmI | GAATGC | 1 cut(s) | 569 |
| Bsp1286I | GDGCHC | 2 cut(s) | 387, 658 |
| BspCNI | CTCAG | 1 cut(s) | 361 |
| BspLI | GGNNCC | 1 cut(s) | 823 |
| Bst2UI | CCWGG | 1 cut(s) | 457 |
| BstDEI | CTNAG | 4 cut(s) | 45, 192, 352, 369 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 46, 136 |
| BstNI | CCWGG | 1 cut(s) | 457 |
| BstNSI | RCATGY | 1 cut(s) | 56 |
| BstSCI | CCNGG | 1 cut(s) | 455 |
| BstSLI | GKGCMC | 1 cut(s) | 387 |
| BstV1I | GCAGC | 1 cut(s) | 52 |
| Csp6I | GTAC | 1 cut(s) | 72 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 39, 74 |
| CviAII | CATG | 2 cut(s) | 53, 388 |
| CviQI | GTAC | 1 cut(s) | 72 |
| DdeI | CTNAG | 4 cut(s) | 45, 192, 352, 369 |
| EcoRII | CCWGG | 1 cut(s) | 455 |
| EcoT22I | ATGCAT | 1 cut(s) | 94 |
| FaeI | CATG | 2 cut(s) | 56, 391 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 619, 651 |
| FaqI | GGGAC | 2 cut(s) | 24, 109 |
| FatI | CATG | 2 cut(s) | 52, 387 |
| Fnu4HI | GCNGC | 1 cut(s) | 41 |
| Fsp4HI | GCNGC | 1 cut(s) | 41 |
| GluI | GCNGC | 1 cut(s) | 41 |
| GsaI | CCCAGC | 1 cut(s) | 594 |
| GsuI | CTGGAG | 1 cut(s) | 478 |
| Hin1II | CATG | 2 cut(s) | 56, 391 |
| HincII | GTYRAC | 1 cut(s) | 532 |
| HindII | GTYRAC | 1 cut(s) | 532 |
| HindIII | AAGCTT | 1 cut(s) | 320 |
| HinfI | GANTC | 3 cut(s) | 4, 452, 805 |
| Hpy166II | GTNNAC | 2 cut(s) | 385, 532 |
| Hpy188I | TCNGA | 4 cut(s) | 235, 305, 370, 702 |
| Hpy188III | TCNNGA | 1 cut(s) | 491 |
| Hpy8I | GTNNAC | 2 cut(s) | 385, 532 |
| HpyAV | CCTTC | 2 cut(s) | 553, 699 |
| HpyCH4V | TGCA | 6 cut(s) | 92, 139, 385, 479, 569, 641 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 46, 136 |
| HpyF3I | CTNAG | 4 cut(s) | 45, 192, 352, 369 |
| Hsp92II | CATG | 2 cut(s) | 56, 391 |
| LmnI | GCTCC | 1 cut(s) | 297 |
| LpnPI | CCDG | 6 cut(s) | 140, 407, 442, 469, 576, 759 |
| Lsp1109I | GCAGC | 1 cut(s) | 52 |
| LweI | GCATC | 2 cut(s) | 79, 309 |
| MboII | GAAGA | 5 cut(s) | 509, 533, 568, 624, 627 |
| MhlI | GDGCHC | 2 cut(s) | 387, 658 |
| MluCI | AATT | 3 cut(s) | 374, 578, 617 |
| Mph1103I | ATGCAT | 1 cut(s) | 94 |
| MseI | TTAA | 3 cut(s) | 465, 780, 795 |
| MspA1I | CMGCKG | 1 cut(s) | 410 |
| MspR9I | CCNGG | 1 cut(s) | 457 |
| Mva1269I | GAATGC | 1 cut(s) | 569 |
| MvaI | CCWGG | 1 cut(s) | 457 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 46, 136 |
| NlaIII | CATG | 2 cut(s) | 56, 391 |
| NlaIV | GGNNCC | 1 cut(s) | 823 |
| NsiI | ATGCAT | 1 cut(s) | 94 |
| NspI | RCATGY | 1 cut(s) | 56 |
| PctI | GAATGC | 1 cut(s) | 569 |
| PfeI | GAWTC | 3 cut(s) | 4, 452, 805 |
| PfoI | TCCNGGA | 1 cut(s) | 455 |
| PkrI | GCNGC | 1 cut(s) | 42 |
| PsiI | TTATAA | 1 cut(s) | 761 |
| Psp6I | CCWGG | 1 cut(s) | 455 |
| PspFI | CCCAGC | 1 cut(s) | 590 |
| PspGI | CCWGG | 1 cut(s) | 455 |
| PspN4I | GGNNCC | 1 cut(s) | 823 |
| PvuII | CAGCTG | 1 cut(s) | 410 |
| RsaI | GTAC | 1 cut(s) | 73 |
| RsaNI | GTAC | 1 cut(s) | 72 |
| SaqAI | TTAA | 3 cut(s) | 465, 780, 795 |
| SatI | GCNGC | 1 cut(s) | 41 |
| ScrFI | CCNGG | 1 cut(s) | 457 |
| SduI | GDGCHC | 2 cut(s) | 387, 658 |
| SfaNI | GCATC | 2 cut(s) | 79, 309 |
| SmlI | CTYRAG | 1 cut(s) | 317 |
| SmoI | CTYRAG | 1 cut(s) | 317 |
| Sse9I | AATT | 3 cut(s) | 374, 578, 617 |
| SspI | AATATT | 1 cut(s) | 331 |
| StyD4I | CCNGG | 1 cut(s) | 455 |
| TasI | AATT | 3 cut(s) | 374, 578, 617 |
| TatI | WGTACW | 1 cut(s) | 71 |
| TfiI | GAWTC | 3 cut(s) | 4, 452, 805 |
| Tru1I | TTAA | 3 cut(s) | 465, 780, 795 |
| Tru9I | TTAA | 3 cut(s) | 465, 780, 795 |
| TseI | GCWGC | 1 cut(s) | 40 |
| TspDTI | ATGAA | 4 cut(s) | 17, 132, 432, 483 |
| VneI | GTGCAC | 1 cut(s) | 383 |
| XapI | RAATTY | 2 cut(s) | 578, 617 |
| XceI | RCATGY | 1 cut(s) | 56 |
| Zsp2I | ATGCAT | 1 cut(s) | 94 |