gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 174 |
| AcsI | RAATTY | 1 cut(s) | 400 |
| AfaI | GTAC | 1 cut(s) | 253 |
| AgsI | TTSAA | 5 cut(s) | 26, 32, 109, 377, 406 |
| AjnI | CCWGG | 1 cut(s) | 315 |
| AluBI | AGCT | 1 cut(s) | 371 |
| AluI | AGCT | 1 cut(s) | 371 |
| Alw26I | GTCTC | 1 cut(s) | 163 |
| ApeKI | GCWGC | 1 cut(s) | 14 |
| ApoI | RAATTY | 1 cut(s) | 400 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 401 |
| AspLEI | GCGC | 1 cut(s) | 19 |
| BccI | CCATC | 1 cut(s) | 320 |
| BciT130I | CCWGG | 1 cut(s) | 317 |
| BcoDI | GTCTC | 1 cut(s) | 163 |
| BfaI | CTAG | 1 cut(s) | 255 |
| BfmI | CTRYAG | 1 cut(s) | 87 |
| BisI | GCNGC | 1 cut(s) | 15 |
| BlsI | GCNGC | 1 cut(s) | 16 |
| BmcAI | AGTACT | 1 cut(s) | 253 |
| Bme1390I | CCNGG | 1 cut(s) | 317 |
| BmrFI | CCNGG | 1 cut(s) | 317 |
| BpmI | CTGGAG | 1 cut(s) | 165 |
| Bse3DI | GCAATG | 1 cut(s) | 210 |
| BseBI | CCWGG | 1 cut(s) | 317 |
| BseGI | GGATG | 3 cut(s) | 129, 291, 312 |
| BseMI | GCAATG | 1 cut(s) | 210 |
| Bsh1236I | CGCG | 1 cut(s) | 174 |
| BsmAI | GTCTC | 1 cut(s) | 163 |
| BsmBI | CGTCTC | 1 cut(s) | 163 |
| Bsp143I | GATC | 1 cut(s) | 271 |
| BspFNI | CGCG | 1 cut(s) | 174 |
| BspHI | TCATGA | 1 cut(s) | 274 |
| BsrDI | GCAATG | 1 cut(s) | 210 |
| BssMI | GATC | 1 cut(s) | 271 |
| Bst2UI | CCWGG | 1 cut(s) | 317 |
| BstDEI | CTNAG | 2 cut(s) | 121, 414 |
| BstF5I | GGATG | 3 cut(s) | 129, 291, 312 |
| BstFNI | CGCG | 1 cut(s) | 174 |
| BstHHI | GCGC | 1 cut(s) | 19 |
| BstKTI | GATC | 1 cut(s) | 274 |
| BstMAI | GTCTC | 1 cut(s) | 163 |
| BstMBI | GATC | 1 cut(s) | 271 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 266 |
| BstNI | CCWGG | 1 cut(s) | 317 |
| BstSCI | CCNGG | 1 cut(s) | 315 |
| BstSFI | CTRYAG | 1 cut(s) | 87 |
| BstUI | CGCG | 1 cut(s) | 174 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 301 |
| BtsCI | GGATG | 3 cut(s) | 129, 291, 312 |
| CciI | TCATGA | 1 cut(s) | 274 |
| CfoI | GCGC | 1 cut(s) | 19 |
| CseI | GACGC | 1 cut(s) | 180 |
| Csp6I | GTAC | 1 cut(s) | 252 |
| CviAII | CATG | 4 cut(s) | 70, 275, 328, 362 |
| CviJI | RGCY | 3 cut(s) | 125, 293, 371 |
| CviKI_1 | RGCY | 3 cut(s) | 125, 293, 371 |
| CviQI | GTAC | 1 cut(s) | 252 |
| DdeI | CTNAG | 2 cut(s) | 121, 414 |
| DpnI | GATC | 1 cut(s) | 273 |
| DpnII | GATC | 1 cut(s) | 271 |
| EcoRII | CCWGG | 1 cut(s) | 315 |
| Esp3I | CGTCTC | 1 cut(s) | 163 |
| FaeI | CATG | 4 cut(s) | 73, 278, 331, 365 |
| FaiI | YATR | 5 cut(s) | 71, 207, 276, 329, 363 |
| FatI | CATG | 4 cut(s) | 69, 274, 327, 361 |
| Fnu4HI | GCNGC | 1 cut(s) | 15 |
| FokI | GGATG | 3 cut(s) | 116, 298, 299 |
| Fsp4HI | GCNGC | 1 cut(s) | 15 |
| FspBI | CTAG | 1 cut(s) | 255 |
| GlaI | GCGC | 1 cut(s) | 18 |
| GluI | GCNGC | 1 cut(s) | 15 |
| GsuI | CTGGAG | 1 cut(s) | 165 |
| HgaI | GACGC | 1 cut(s) | 180 |
| HhaI | GCGC | 1 cut(s) | 19 |
| Hin1II | CATG | 4 cut(s) | 73, 278, 331, 365 |
| Hin6I | GCGC | 1 cut(s) | 17 |
| HinP1I | GCGC | 1 cut(s) | 17 |
| HinfI | GANTC | 2 cut(s) | 56, 410 |
| Hpy188III | TCNNGA | 2 cut(s) | 53, 275 |
| HpyCH4V | TGCA | 3 cut(s) | 42, 98, 389 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 266 |
| HpyF3I | CTNAG | 2 cut(s) | 121, 414 |
| Hsp92II | CATG | 4 cut(s) | 73, 278, 331, 365 |
| HspAI | GCGC | 1 cut(s) | 17 |
| Kzo9I | GATC | 1 cut(s) | 271 |
| LpnPI | CCDG | 5 cut(s) | 38, 129, 260, 302, 329 |
| MaeI | CTAG | 1 cut(s) | 255 |
| MalI | GATC | 1 cut(s) | 273 |
| MboI | GATC | 1 cut(s) | 271 |
| MboII | GAAGA | 1 cut(s) | 409 |
| MfeI | CAATTG | 2 cut(s) | 61, 390 |
| MluCI | AATT | 8 cut(s) | 27, 61, 135, 154, 339, 365, 390, 400 |
| MnlI | CCTC | 2 cut(s) | 38, 140 |
| MroXI | GAANNNNTTC | 1 cut(s) | 401 |
| MseI | TTAA | 3 cut(s) | 117, 354, 383 |
| MslI | CAYNNNNRTG | 1 cut(s) | 74 |
| MspR9I | CCNGG | 1 cut(s) | 317 |
| MunI | CAATTG | 2 cut(s) | 61, 390 |
| MvaI | CCWGG | 1 cut(s) | 317 |
| MvnI | CGCG | 1 cut(s) | 174 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 266 |
| NdeII | GATC | 1 cut(s) | 271 |
| NlaIII | CATG | 4 cut(s) | 73, 278, 331, 365 |
| PagI | TCATGA | 1 cut(s) | 274 |
| PdmI | GAANNNNTTC | 1 cut(s) | 401 |
| PfeI | GAWTC | 1 cut(s) | 56 |
| PfoI | TCCNGGA | 1 cut(s) | 315 |
| PkrI | GCNGC | 1 cut(s) | 16 |
| Psp6I | CCWGG | 1 cut(s) | 315 |
| PspGI | CCWGG | 1 cut(s) | 315 |
| RsaI | GTAC | 1 cut(s) | 253 |
| RsaNI | GTAC | 1 cut(s) | 252 |
| RseI | CAYNNNNRTG | 1 cut(s) | 74 |
| SaqAI | TTAA | 3 cut(s) | 117, 354, 383 |
| SatI | GCNGC | 1 cut(s) | 15 |
| Sau3AI | GATC | 1 cut(s) | 271 |
| ScaI | AGTACT | 1 cut(s) | 253 |
| ScrFI | CCNGG | 1 cut(s) | 317 |
| SetI | ASST | 3 cut(s) | 284, 303, 373 |
| SfcI | CTRYAG | 1 cut(s) | 87 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 74 |
| Sse9I | AATT | 8 cut(s) | 27, 61, 135, 154, 339, 365, 390, 400 |
| SspI | AATATT | 1 cut(s) | 380 |
| SspMI | CTAG | 1 cut(s) | 255 |
| StyD4I | CCNGG | 1 cut(s) | 315 |
| TasI | AATT | 8 cut(s) | 27, 61, 135, 154, 339, 365, 390, 400 |
| TatI | WGTACW | 1 cut(s) | 251 |
| TfiI | GAWTC | 1 cut(s) | 56 |
| Tru1I | TTAA | 3 cut(s) | 117, 354, 383 |
| Tru9I | TTAA | 3 cut(s) | 117, 354, 383 |
| TseI | GCWGC | 1 cut(s) | 14 |
| TspDTI | ATGAA | 5 cut(s) | 58, 72, 291, 302, 378 |
| XapI | RAATTY | 1 cut(s) | 400 |
| XmnI | GAANNNNTTC | 1 cut(s) | 401 |
| XspI | CTAG | 1 cut(s) | 255 |
| ZrmI | AGTACT | 1 cut(s) | 253 |