gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 75 |
| AclWI | GGATC | 2 cut(s) | 12, 30 |
| AcuI | CTGAAG | 1 cut(s) | 356 |
| AluBI | AGCT | 6 cut(s) | 37, 90, 166, 221, 253, 298 |
| AluI | AGCT | 6 cut(s) | 37, 90, 166, 221, 253, 298 |
| Alw21I | GWGCWC | 2 cut(s) | 53, 288 |
| AlwI | GGATC | 2 cut(s) | 12, 30 |
| Ama87I | CYCGRG | 1 cut(s) | 313 |
| ApeKI | GCWGC | 1 cut(s) | 90 |
| AvaI | CYCGRG | 1 cut(s) | 313 |
| BanII | GRGCYC | 1 cut(s) | 149 |
| Bbv12I | GWGCWC | 2 cut(s) | 53, 288 |
| BbvI | GCAGC | 1 cut(s) | 77 |
| BfaI | CTAG | 4 cut(s) | 32, 38, 182, 228 |
| BisI | GCNGC | 1 cut(s) | 91 |
| BlsI | GCNGC | 1 cut(s) | 92 |
| BmeT110I | CYCGRG | 1 cut(s) | 313 |
| BpmI | CTGGAG | 1 cut(s) | 275 |
| BsaBI | GATNNNNATC | 1 cut(s) | 201 |
| BsaJI | CCNNGG | 1 cut(s) | 171 |
| Bse3DI | GCAATG | 1 cut(s) | 377 |
| Bse8I | GATNNNNATC | 1 cut(s) | 201 |
| BseDI | CCNNGG | 1 cut(s) | 171 |
| BseJI | GATNNNNATC | 1 cut(s) | 201 |
| BseMI | GCAATG | 1 cut(s) | 377 |
| BseMII | CTCAG | 2 cut(s) | 36, 365 |
| BseXI | GCAGC | 1 cut(s) | 77 |
| BsiHKAI | GWGCWC | 2 cut(s) | 53, 288 |
| BsiHKCI | CYCGRG | 1 cut(s) | 313 |
| BsoBI | CYCGRG | 1 cut(s) | 313 |
| Bsp1286I | GDGCHC | 3 cut(s) | 53, 149, 288 |
| Bsp143I | GATC | 2 cut(s) | 4, 22 |
| Bsp19I | CCATGG | 1 cut(s) | 171 |
| BspCNI | CTCAG | 2 cut(s) | 37, 364 |
| BspPI | GGATC | 2 cut(s) | 12, 30 |
| BsrDI | GCAATG | 1 cut(s) | 377 |
| BssECI | CCNNGG | 1 cut(s) | 171 |
| BssMI | GATC | 2 cut(s) | 4, 22 |
| BssT1I | CCWWGG | 1 cut(s) | 171 |
| BstC8I | GCNNGC | 1 cut(s) | 168 |
| BstDEI | CTNAG | 3 cut(s) | 45, 105, 351 |
| BstDSI | CCRYGG | 1 cut(s) | 171 |
| BstKTI | GATC | 2 cut(s) | 7, 25 |
| BstMBI | GATC | 2 cut(s) | 4, 22 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 34 |
| BstNSI | RCATGY | 1 cut(s) | 365 |
| BstV1I | GCAGC | 1 cut(s) | 77 |
| BstX2I | RGATCY | 1 cut(s) | 4 |
| BstYI | RGATCY | 1 cut(s) | 4 |
| BtgI | CCRYGG | 1 cut(s) | 171 |
| BtsIMutI | CAGTG | 1 cut(s) | 42 |
| Cac8I | GCNNGC | 1 cut(s) | 168 |
| CviAII | CATG | 3 cut(s) | 172, 334, 362 |
| DdeI | CTNAG | 3 cut(s) | 45, 105, 351 |
| DpnI | GATC | 2 cut(s) | 6, 24 |
| DpnII | GATC | 2 cut(s) | 4, 22 |
| Eco130I | CCWWGG | 1 cut(s) | 171 |
| Eco24I | GRGCYC | 1 cut(s) | 149 |
| Eco57I | CTGAAG | 1 cut(s) | 356 |
| Eco88I | CYCGRG | 1 cut(s) | 313 |
| EcoT14I | CCWWGG | 1 cut(s) | 171 |
| EcoT38I | GRGCYC | 1 cut(s) | 149 |
| ErhI | CCWWGG | 1 cut(s) | 171 |
| FaeI | CATG | 3 cut(s) | 175, 337, 365 |
| FaiI | YATR | 9 cut(s) | 75, 87, 128, 140, 173, 191, 293, 335, 363 |
| FatI | CATG | 3 cut(s) | 171, 333, 361 |
| Fnu4HI | GCNGC | 1 cut(s) | 91 |
| FriOI | GRGCYC | 1 cut(s) | 149 |
| Fsp4HI | GCNGC | 1 cut(s) | 91 |
| FspBI | CTAG | 4 cut(s) | 32, 38, 182, 228 |
| GluI | GCNGC | 1 cut(s) | 91 |
| GsuI | CTGGAG | 1 cut(s) | 275 |
| Hin1II | CATG | 3 cut(s) | 175, 337, 365 |
| HinfI | GANTC | 1 cut(s) | 347 |
| Hpy188I | TCNGA | 2 cut(s) | 133, 389 |
| Hpy188III | TCNNGA | 2 cut(s) | 206, 264 |
| HpyAV | CCTTC | 1 cut(s) | 94 |
| HpyCH4V | TGCA | 2 cut(s) | 93, 361 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 34 |
| HpyF3I | CTNAG | 3 cut(s) | 45, 105, 351 |
| Hsp92II | CATG | 3 cut(s) | 175, 337, 365 |
| Kzo9I | GATC | 2 cut(s) | 4, 22 |
| LmnI | GCTCC | 2 cut(s) | 283, 295 |
| LpnPI | CCDG | 5 cut(s) | 82, 174, 239, 249, 338 |
| Lsp1109I | GCAGC | 1 cut(s) | 77 |
| MaeI | CTAG | 4 cut(s) | 32, 38, 182, 228 |
| MaeIII | GTNAC | 1 cut(s) | 212 |
| MalI | GATC | 2 cut(s) | 6, 24 |
| MboI | GATC | 2 cut(s) | 4, 22 |
| MboII | GAAGA | 2 cut(s) | 68, 71 |
| MflI | RGATCY | 1 cut(s) | 4 |
| MhlI | GDGCHC | 3 cut(s) | 53, 149, 288 |
| MluCI | AATT | 1 cut(s) | 150 |
| MlyI | GAGTC | 1 cut(s) | 341 |
| MnlI | CCTC | 6 cut(s) | 13, 133, 135, 273, 309, 317 |
| MseI | TTAA | 3 cut(s) | 246, 320, 342 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 34 |
| NcoI | CCATGG | 1 cut(s) | 171 |
| NdeII | GATC | 2 cut(s) | 4, 22 |
| NlaIII | CATG | 3 cut(s) | 175, 337, 365 |
| NmuCI | GTSAC | 1 cut(s) | 212 |
| NspI | RCATGY | 1 cut(s) | 365 |
| PaeR7I | CTCGAG | 1 cut(s) | 313 |
| PkrI | GCNGC | 1 cut(s) | 92 |
| PleI | GAGTC | 1 cut(s) | 341 |
| PpsI | GAGTC | 1 cut(s) | 341 |
| PsiI | TTATAA | 1 cut(s) | 75 |
| PspXI | VCTCGAGB | 1 cut(s) | 313 |
| PsuI | RGATCY | 1 cut(s) | 4 |
| SaqAI | TTAA | 3 cut(s) | 246, 320, 342 |
| SatI | GCNGC | 1 cut(s) | 91 |
| Sau3AI | GATC | 2 cut(s) | 4, 22 |
| SchI | GAGTC | 1 cut(s) | 341 |
| SduI | GDGCHC | 3 cut(s) | 53, 149, 288 |
| Sfr274I | CTCGAG | 1 cut(s) | 313 |
| SlaI | CTCGAG | 1 cut(s) | 313 |
| SmlI | CTYRAG | 1 cut(s) | 313 |
| SmoI | CTYRAG | 1 cut(s) | 313 |
| Sse9I | AATT | 1 cut(s) | 150 |
| SspI | AATATT | 2 cut(s) | 71, 395 |
| SspMI | CTAG | 4 cut(s) | 32, 38, 182, 228 |
| StyI | CCWWGG | 1 cut(s) | 171 |
| TaqI | TCGA | 2 cut(s) | 303, 314 |
| TasI | AATT | 1 cut(s) | 150 |
| Tru1I | TTAA | 3 cut(s) | 246, 320, 342 |
| Tru9I | TTAA | 3 cut(s) | 246, 320, 342 |
| TscAI | CASTG | 1 cut(s) | 49 |
| TseFI | GTSAC | 1 cut(s) | 212 |
| TseI | GCWGC | 1 cut(s) | 90 |
| Tsp45I | GTSAC | 1 cut(s) | 212 |
| TspRI | CASTG | 1 cut(s) | 49 |
| XceI | RCATGY | 1 cut(s) | 365 |
| XhoI | CTCGAG | 1 cut(s) | 313 |
| XspI | CTAG | 4 cut(s) | 32, 38, 182, 228 |