FvH4_7g28530

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000067
Physical Location & Seq
Forward (+)
21140366 .. 21141822
1457 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g28530.t1

Sequence Viewer

Length: 1155 bp
ATGGGTAGAGAAATCATCCGCCTAGAATCTACTAGAGAACCTGGGAAGCGCAGTAGGTTGTGGAGTCACGAAGATGTTAATCACATATTGACTCAAAATACGGCTACGGATGCAGTTGAATGCTTAATGCTAGACTTGTCAAATTCAAAAGTTGACCTATGCATAAATAGGGAGGCCTTTGTGAGAATGAAGAAGCTAAGACTACTCATAATCTATCATTCACACTACTCCATATTTGATTCCAGATACTATTATATATGGGGTGGAAGATGGAGTAGAAGCATTGAGGATATATATCCAGTTGACGGCTGTAAACAAGTCGCGGAGGGGGACTTGGGGTTTCTTTCTCATGAATTGAGGTTTCTCTTATGGCATGGATGCCCGCTGAAGTCTTTGCCATCAAACTTTATCCCGCAGAATCTTGTTAGACTTCACATGCGTGCCCCTGCAAAATCTGAAAATCATCTTGTTAAGTCACTGCCAATACCTTGTCAAAATCCTGACTTGACTGAGGCGATAAATCTTGAGAAACTAATGCTTGATGGTTGTTCAACTTTAATTGAGGTCCATTCATCCATTTATGCTCTTCAAAAACTTGATTACTTGAATTTAAAGGGGTGCAAAGAACTCAAGAATCCGCCAAGCAGCATTCATATGAAATCTCTGAAGACCCTTGACATTTCTGGCTGTTTGTATGTTGGAAATTTTCCAGAAATTTCTCATGTTGTGAATGAGCTAAAAGAGCTTTATCTAGATGGGACTGTAATTAAAGAACTACGCTCATCAATTGACAATCTCACTGGGCTTTATGTTTTGGATCTCTCAGATTGCACAGAACTTATGACTCTTCCAACCAGCATTCATATGAAATCGCTAGTTACCCTTAGACTTTCTGGCTGTTCAAATGTGGAGAAGTTTCCAGAGATTTCAGAAATCATGAAGAAGCTAGCTGAGCTTCATTTAGATGGGACCGCAATTAAAGGACTGCCCTCATCAATTGGTCTGCTTGAGGGGCTCAAAAGATCAAGTATGAGGAACTGTAAAAGCCTTGAATTTCTTCCCAACGGTATCTGTAATTTGGTGGACCTTAAAGATCTCAATCTGTCTAATTGCTCTGCACTTCATAACTTGCCTGAGAGAAATTGGGGGAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR

Protein Analysis

385

Amino Acids

43.45

Weight (kDa)

6.91

Isoelectric Point (pI)

44.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 218 - 320 2e-07 Leucine-rich repeat region
LRR_13 PF23286 219 - 303 6.6e-12 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 269 - 371 4.3e-08 Leucine-rich repeat region
LRR_13 PF23286 290 - 375 6.2e-09 Disease resistance protein RPS4B-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 323
AciI CCGC 6 cut(s) 19, 323, 383, 413, 638, 972
AclWI GGATC 1 cut(s) 825
AcsI RAATTY 5 cut(s) 142, 607, 703, 714, 1052
AcuI CTGAAG 2 cut(s) 407, 686
AfiI CCNNNNNNNGG 1 cut(s) 305
AgsI TTSAA 7 cut(s) 119, 147, 552, 590, 607, 903, 1052
AjnI CCWGG 1 cut(s) 40
AleI CACNNNNGTG 1 cut(s) 438
AluBI AGCT 6 cut(s) 196, 736, 745, 946, 950, 955
AluI AGCT 6 cut(s) 196, 736, 745, 946, 950, 955
AlwI GGATC 1 cut(s) 825
AoxI GGCC 1 cut(s) 174
ApeKI GCWGC 1 cut(s) 645
ApoI RAATTY 5 cut(s) 142, 607, 703, 714, 1052
Asp700I GAANNNNTTC 1 cut(s) 1056
AspLEI GCGC 1 cut(s) 51
AspS9I GGNCC 3 cut(s) 565, 969, 1084
AsuNHI GCTAGC 1 cut(s) 946
AvaII GGWCC 3 cut(s) 565, 969, 1084
BaeGI GKGCMC 1 cut(s) 445
BanII GRGCYC 1 cut(s) 1017
BbsI GAAGAC 1 cut(s) 674
BbvI GCAGC 1 cut(s) 657
BccI CCATC 5 cut(s) 264, 406, 536, 749, 959
BceAI ACGGC 2 cut(s) 117, 322
BciT130I CCWGG 1 cut(s) 42
BfaI CTAG 6 cut(s) 23, 33, 131, 752, 875, 947
BglII AGATCT 1 cut(s) 1093
BisI GCNGC 1 cut(s) 646
BlpI GCTNAGC 1 cut(s) 951
BlsI GCNGC 1 cut(s) 647
Bme1390I CCNGG 1 cut(s) 42
Bme18I GGWCC 3 cut(s) 565, 969, 1084
BmgT120I GGNCC 3 cut(s) 565, 969, 1084
BmiI GGNNCC 1 cut(s) 970
BmrFI CCNGG 1 cut(s) 42
BmrI ACTGGG 1 cut(s) 810
BmsI GCATC 2 cut(s) 100, 368
BmtI GCTAGC 1 cut(s) 950
BmuI ACTGGG 1 cut(s) 810
BpiI GAAGAC 1 cut(s) 674
Bpu1102I GCTNAGC 1 cut(s) 951
BpuEI CTTGAG 3 cut(s) 545, 614, 1028
BsaBI GATNNNNATC 3 cut(s) 78, 294, 1098
BsaJI CCNNGG 1 cut(s) 41
Bsc4I CCNNNNNNNGG 1 cut(s) 305
Bse1I ACTGG 2 cut(s) 299, 805
Bse8I GATNNNNATC 3 cut(s) 78, 294, 1098
BseBI CCWGG 1 cut(s) 42
BseDI CCNNGG 1 cut(s) 41
BseGI GGATG 4 cut(s) 15, 115, 383, 572
BseJI GATNNNNATC 3 cut(s) 78, 294, 1098
BseLI CCNNNNNNNGG 1 cut(s) 305
BseMII CTCAG 4 cut(s) 501, 837, 942, 1125
BseNI ACTGG 2 cut(s) 299, 805
BseSI GKGCMC 1 cut(s) 445
BseXI GCAGC 1 cut(s) 657
BsgI GTGCAG 1 cut(s) 1101
Bsh1236I CGCG 1 cut(s) 323
BshFI GGCC 1 cut(s) 176
BslFI GGGAC 3 cut(s) 344, 772, 982
BslI CCNNNNNNNGG 1 cut(s) 305
BsmFI GGGAC 3 cut(s) 344, 772, 982
BsmI GAATGC 3 cut(s) 125, 648, 858
BsnI GGCC 1 cut(s) 176
Bsp1286I GDGCHC 2 cut(s) 445, 1017
Bsp143I GATC 3 cut(s) 817, 1022, 1093
Bsp1720I GCTNAGC 1 cut(s) 951
BspACI CCGC 6 cut(s) 19, 323, 383, 413, 638, 972
BspANI GGCC 1 cut(s) 176
BspCNI CTCAG 4 cut(s) 502, 836, 943, 1126
BspFNI CGCG 1 cut(s) 323
BspHI TCATGA 2 cut(s) 349, 936
BspLI GGNNCC 1 cut(s) 970
BspOI GCTAGC 1 cut(s) 950
BspPI GGATC 1 cut(s) 825
BspQI GCTCTTC 1 cut(s) 591
BsrI ACTGG 2 cut(s) 299, 805
BssECI CCNNGG 1 cut(s) 41
BssMI GATC 3 cut(s) 817, 1022, 1093
Bst2UI CCWGG 1 cut(s) 42
Bst4CI ACNGT 3 cut(s) 763, 1040, 1067
Bst6I CTCTTC 2 cut(s) 591, 852
BstC8I GCNNGC 3 cut(s) 383, 441, 948
BstDEI CTNAG 6 cut(s) 197, 510, 823, 884, 951, 1134
BstF5I GGATG 4 cut(s) 15, 115, 383, 572
BstFNI CGCG 1 cut(s) 323
BstHHI GCGC 1 cut(s) 51
BstKTI GATC 3 cut(s) 820, 1025, 1096
BstMBI GATC 3 cut(s) 817, 1022, 1093
BstMWI GCNNNNNNNGC 4 cut(s) 110, 742, 952, 1012
BstNI CCWGG 1 cut(s) 42
BstNSI RCATGY 1 cut(s) 439
BstSCI CCNGG 1 cut(s) 40
BstSLI GKGCMC 1 cut(s) 445
BstUI CGCG 1 cut(s) 323
BstV1I GCAGC 1 cut(s) 657
BstV2I GAAGAC 1 cut(s) 674
BstX2I RGATCY 2 cut(s) 817, 1093
BstYI RGATCY 2 cut(s) 817, 1093
BsuRI GGCC 1 cut(s) 176
BtsCI GGATG 4 cut(s) 15, 115, 383, 572
BtsI GCAGTG 1 cut(s) 476
BtsIMutI CAGTG 2 cut(s) 476, 798
Cac8I GCNNGC 3 cut(s) 383, 441, 948
CciI TCATGA 2 cut(s) 349, 936
CfoI GCGC 1 cut(s) 51
Cfr13I GGNCC 3 cut(s) 565, 969, 1084
CviAII CATG 5 cut(s) 350, 374, 436, 722, 937
DdeI CTNAG 6 cut(s) 197, 510, 823, 884, 951, 1134
DpnI GATC 3 cut(s) 819, 1024, 1095
DpnII GATC 3 cut(s) 817, 1022, 1093
DraI TTTAAA 1 cut(s) 612
Eam1104I CTCTTC 2 cut(s) 591, 852
EarI CTCTTC 2 cut(s) 591, 852
EciI GGCGGA 2 cut(s) 8, 627
Eco147I AGGCCT 1 cut(s) 176
Eco24I GRGCYC 1 cut(s) 1017
Eco47I GGWCC 3 cut(s) 565, 969, 1084
Eco57I CTGAAG 2 cut(s) 407, 686
EcoRII CCWGG 1 cut(s) 40
EcoT22I ATGCAT 1 cut(s) 164
EcoT38I GRGCYC 1 cut(s) 1017
FaeI CATG 5 cut(s) 353, 377, 439, 725, 940
FaqI GGGAC 3 cut(s) 344, 772, 982
FatI CATG 5 cut(s) 349, 373, 435, 721, 936
FauI CCCGC 2 cut(s) 390, 420
FauNDI CATATG 2 cut(s) 654, 864
Fnu4HI GCNGC 1 cut(s) 646
FokI GGATG 4 cut(s) 2, 122, 390, 559
FriOI GRGCYC 1 cut(s) 1017
Fsp4HI GCNGC 1 cut(s) 646
FspBI CTAG 6 cut(s) 23, 33, 131, 752, 875, 947
GlaI GCGC 1 cut(s) 50
GluI GCNGC 1 cut(s) 646
HaeIII GGCC 1 cut(s) 176
HhaI GCGC 1 cut(s) 51
Hin1II CATG 5 cut(s) 353, 377, 439, 725, 940
Hin6I GCGC 1 cut(s) 49
HinP1I GCGC 1 cut(s) 49
HincII GTYRAC 2 cut(s) 154, 304
HindII GTYRAC 2 cut(s) 154, 304
HinfI GANTC 7 cut(s) 26, 64, 91, 239, 418, 634, 844
Hpy166II GTNNAC 4 cut(s) 154, 304, 314, 1084
Hpy188I TCNGA 4 cut(s) 457, 666, 826, 931
Hpy8I GTNNAC 4 cut(s) 154, 304, 314, 1084
HpyCH4III ACNGT 3 cut(s) 763, 1040, 1067
HpyCH4V TGCA 6 cut(s) 113, 162, 449, 621, 831, 1118
HpyF10VI GCNNNNNNNGC 4 cut(s) 110, 742, 952, 1012
HpyF3I CTNAG 6 cut(s) 197, 510, 823, 884, 951, 1134
Hsp92II CATG 5 cut(s) 353, 377, 439, 725, 940
HspAI GCGC 1 cut(s) 49
Kzo9I GATC 3 cut(s) 817, 1022, 1093
LguI GCTCTTC 1 cut(s) 591
Lsp1109I GCAGC 1 cut(s) 657
LweI GCATC 2 cut(s) 100, 368
MaeI CTAG 6 cut(s) 23, 33, 131, 752, 875, 947
MaeIII GTNAC 3 cut(s) 65, 474, 877
MalI GATC 3 cut(s) 819, 1024, 1095
MboI GATC 3 cut(s) 817, 1022, 1093
MboII GAAGA 8 cut(s) 83, 202, 279, 578, 679, 839, 952, 1049
MfeI CAATTG 2 cut(s) 786, 996
MflI RGATCY 2 cut(s) 817, 1093
MhlI GDGCHC 2 cut(s) 445, 1017
MlyI GAGTC 3 cut(s) 73, 85, 838
MmeI TCCRAC 2 cut(s) 679, 875
MnlI CCTC 9 cut(s) 166, 280, 319, 351, 505, 556, 1000, 1003, 1026
Mph1103I ATGCAT 1 cut(s) 164
MroXI GAANNNNTTC 1 cut(s) 1056
MseI TTAA 8 cut(s) 78, 125, 471, 557, 611, 768, 978, 1089
MslI CAYNNNNRTG 5 cut(s) 72, 438, 653, 863, 963
MspA1I CMGCKG 1 cut(s) 385
MspR9I CCNGG 1 cut(s) 42
MunI CAATTG 2 cut(s) 786, 996
Mva1269I GAATGC 3 cut(s) 125, 648, 858
MvaI CCWGG 1 cut(s) 42
MvnI CGCG 1 cut(s) 323
MwoI GCNNNNNNNGC 4 cut(s) 110, 742, 952, 1012
NdeI CATATG 2 cut(s) 654, 864
NdeII GATC 3 cut(s) 817, 1022, 1093
NheI GCTAGC 1 cut(s) 946
NlaIII CATG 5 cut(s) 353, 377, 439, 725, 940
NlaIV GGNNCC 1 cut(s) 970
NmuCI GTSAC 2 cut(s) 65, 474
NsiI ATGCAT 1 cut(s) 164
NspI RCATGY 1 cut(s) 439
OliI CACNNNNGTG 1 cut(s) 438
PagI TCATGA 2 cut(s) 349, 936
PceI AGGCCT 1 cut(s) 176
PciSI GCTCTTC 1 cut(s) 591
PctI GAATGC 3 cut(s) 125, 648, 858
PdmI GAANNNNTTC 1 cut(s) 1056
PfeI GAWTC 4 cut(s) 26, 239, 418, 634
PkrI GCNGC 1 cut(s) 647
PleI GAGTC 3 cut(s) 72, 85, 838
PpsI GAGTC 3 cut(s) 72, 85, 838
Psp6I CCWGG 1 cut(s) 40
PspGI CCWGG 1 cut(s) 40
PspN4I GGNNCC 1 cut(s) 970
PspPI GGNCC 3 cut(s) 565, 969, 1084
PsuI RGATCY 2 cut(s) 817, 1093
RseI CAYNNNNRTG 5 cut(s) 72, 438, 653, 863, 963
SapI GCTCTTC 1 cut(s) 591
SaqAI TTAA 8 cut(s) 78, 125, 471, 557, 611, 768, 978, 1089
SatI GCNGC 1 cut(s) 646
Sau3AI GATC 3 cut(s) 817, 1022, 1093
Sau96I GGNCC 3 cut(s) 565, 969, 1084
SchI GAGTC 3 cut(s) 73, 85, 838
ScrFI CCNGG 1 cut(s) 42
SduI GDGCHC 2 cut(s) 445, 1017
SfaNI GCATC 2 cut(s) 100, 368
SinI GGWCC 3 cut(s) 565, 969, 1084
SmiMI CAYNNNNRTG 5 cut(s) 72, 438, 653, 863, 963
SmlI CTYRAG 3 cut(s) 524, 629, 1007
SmoI CTYRAG 3 cut(s) 524, 629, 1007
SseBI AGGCCT 1 cut(s) 176
SsiI CCGC 6 cut(s) 19, 323, 383, 413, 638, 972
SspMI CTAG 6 cut(s) 23, 33, 131, 752, 875, 947
StuI AGGCCT 1 cut(s) 176
StyD4I CCNGG 1 cut(s) 40
TaaI ACNGT 3 cut(s) 763, 1040, 1067
TfiI GAWTC 4 cut(s) 26, 239, 418, 634
Tru1I TTAA 8 cut(s) 78, 125, 471, 557, 611, 768, 978, 1089
Tru9I TTAA 8 cut(s) 78, 125, 471, 557, 611, 768, 978, 1089
TscAI CASTG 2 cut(s) 483, 805
TseFI GTSAC 2 cut(s) 65, 474
TseI GCWGC 1 cut(s) 645
Tsp45I GTSAC 2 cut(s) 65, 474
TspGWI ACGGA 1 cut(s) 122
TspRI CASTG 2 cut(s) 483, 805
VpaK11BI GGWCC 3 cut(s) 565, 969, 1084
XapI RAATTY 5 cut(s) 142, 607, 703, 714, 1052
XbaI TCTAGA 1 cut(s) 751
XceI RCATGY 1 cut(s) 439
XmnI GAANNNNTTC 1 cut(s) 1056
XspI CTAG 6 cut(s) 23, 33, 131, 752, 875, 947
Zsp2I ATGCAT 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.