pycom07g23590

Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
24454927 .. 24461864
6938 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g23590.2

Sequence Viewer

Length: 5331 bp
ATGTACTACTTTGACCCCTTTCTTGAAGGTGTGAATACACATATAAAGCATACCCTTTCTCTCTTTTGCATTGACTCATTGACTCGGTATAGATCAGGCCATTTTCTGGTGATCCAGTATGTAGATCAATCGAGTATTTCTGCTCTTACATTCCTCTTAATCTTAGCTGCTCGATCATCGCTGATCAGGTGCGATCGATTAATGGCTTCTTCCTTCTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAGAGGGGAAGACACTTGCAGGGGCTTTGTCAGCCATCACTACAAAGCTCTGCGTCAGAAACCAATCAACACCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCTGTTCTTCTTTGGAAATACGATGTGTTCATCAATTTCAGAGGGGAAGACACTCGCAGGGGCTTCGTCAGCCATCTTCACAAAGCTCTGCGTCAGAAATCACTCAACACCTTCATTGACGCCGAAGATCTCCCAAAAGGCGACCGCCTTTCCGATCTCCTGACAGCGATTCGAGAGTCCAGGCTTTCGATTGTAGTTTTCTCTCAAAAGTACGCTTCTTCCACTTGGTGCTTGAAAGAACTCGTCGAAATCTTGGAATGCAAGGATACCAAAAGCCAGATTGTGGTCCCCATTTTCTACGAAGTCGATCCATCCGATATTCGTAATCTCAAAGGAAGTTTTGCCGAAGCTTTTGCTAAACATGAACGCCATTCTAACGTTGACGTGAAGGAGGTGGAGAGCTGGAGGTCTGCTCTTGCCAGAGCCACCGATTTATCCGGTTGGGATTCAAAAAATTCTAAGGATGATGCAGAGCTTATTGAGAAAATTGTAGAAGATGTTTTTCGGAAAGTGATCCACATCTCATCAACATCAAGCAAAGATAAAGGCTTGGTTGGAATGGATTCTCATAAGCATGAAATGCATTTATTATTACATCCTTCTGGAGTTGAAATGAATAATGTTCGCGTTGTTGGAATATGGGGTATGGGTGGTTTAGGCAAAACAACCATCGCTAGAGCTGTTTATGGTGAAATCGCTAGTCAATTTGAAGCTTGTTGCTTTCTTGAAAATGTCAAGGAAGGTTTCATGAAGAAGGACAAACTAGATATGCAGACACAACTTCTATCGAGTATCTCGAAAAACAAGGTGCAGCGTTCCGACATTTTGGAAAAAGGTTTCCAGGTGATGTTAAATAGCCAAAGTCAGAGAAAAGTTCTTATTGTTCTAGATGATGTGGACAAATTAGACCACATTGAAGCTTTACTTGGAGAGCAACATTCCTTTGGCGGTGGAAGTAGAATCATTATAACAACTAGAGATGTGCAATTATTATTAAACAGAGCTGATGCGAGATACGAGCCTGAGAAATTGGATTATCCTGAAGCTCTGGAACTCTTTAGGCTACACGCCTTCAAAAAAAAACAACCCACCAGAGATTATGATGATCTCTCGAGTCGTGCCGTAGAATATGCTAAAGGTCTGCCTTTAGCACTCGAAGTCTTGGGAGCTTTTCTTGATAACAAAACTGTACGTGAGTGGGAAGATGTCTTCGAGAAATTAAAGGAAGCCCCGCCAGGGGGGATTATTGATGTGCTTAAAACAAGCTTCCATGGACTAGATTATAAAGAGCAGAACATCTTTCTAGATATTGCATGTTTCTTTAAAGGAATGGGAAAAGACTTTGCAACCGAAATTCTGGACAGTTGTCGTTTCAATCCTCATGCTGGAATAAGAGTTCTAATCGATCGAGCTCTCATAACTGTCTCAGAAGACGAAGAGGACATACTGGAAATGCATGATTTACTCGAGGAAATGGCTCGAGAAATAGTTCGCGAAGAATCTATCAAGGAGCCTGGAAGACGAAGTAGGTTGTGGAGTTATGAAGATGTTCGTCATGTGCTAACTAAAAATACGGCTACAGAAGCAGTGGAAAGCATTAACCTGGAGTCGCTTAACCCAGATGAGGTATGGAGAAATGCTGAAGCTTTTGTTCCTATGACTCAACTAAGACTTCTCAAGATCAATCATTCCAACAGCAAATGCCACTTGAGTGGGCACTTAAAGTTTCATTTTTGTGAGTTGAGGTGTCTCTCATGGCGTGGATTCCCTCTTACGTCTTTGCCATCCAACCTTAAATTCCAAAATCTTGTTGCCCTTAACATGCGATCTAGTGTCATTGAACGACTTTGGGAAGGAACCCAGACGCTGGAAAAGTTGAAATTCATCGATTTAGGTTTTTGTGAATACCTTAAGGAAACCCCTGACTTCACAAAGGTGCCAAATCTTGAGAAGCTAATTCTTGAAGGTTGTATAAGTTTAGTTGAGGTTCACCCATCAATTAATAATCTCACGGGGTTGAGTTTTCTGAGCTTAGAAAATTGCAAGAAACTTAAGAGTCTTCCAAGCAGCATTTGTATGAAATCTCTCGAAACCCTTGATCGTTCTGGCTGCTCGAGTCTTGAGCAGTTTCCAGAGATTTCAGAAGTTATGGAGAAACTATCGAAGCTTTATTTATCCAGGTCAAAAATTAAAGAACTGCCCTCGTCAATCAATAATCTCACGGGGTTGAGTCATTTGGTCCTAGAAGATTGCAAGGAACTTCAGAGTCTTCCAAGCAGCATTTGTATGAAATCTCTCAAAACCCTTGATCTTTCTGGCTGCTCGAGTCTTGAGCAGTTTCCAGAGATTTCAGAAGTTGTGGAGAAACTATCATGGCTTAATTTGTCCAGGTCAAAAATTAAAGAACTGCCCTCGTCAATCAATAATCTCACGGGGTTGAGTCGTTTGGTCCTAGAAGATTGCAAGGAACTTCAGAGTCTTCCAAGCAGCATTTGTATGAAATCTCTCAAAACCCTTGATCTTTCTGGCTGCTCGAGTCTTGAGCAGTTTCCAGAGATTTCAGAAGTTGTGGAGAAACTATCATTGCTTCATTTGTCCAGGTCAAAAATTAAAGAATTGTCCTCGTCAATCAATAATCTCACGGGGTTGGGTGTTTTGCGCCTAGAAGATTGCAAGGAACTTCAGAGTCTTCCAAGCAGCATTTGTATGAAATCTCTCGAAACCCTTGATCTTTCTGGCTGCACGAGTCTTGAGCAGTTTCCAGAGATTTCAGAAGTTGTGGAGAAACTATCACGGCTTAATTTGTCCAGGTCAAAAATTAAAGAACTGTCCTCGTCAATCAATAATCTCACGGGGTTGGGTGTTTTGTGCCTAAAAGATTGCAAGGAACTTCAGAGTCTTCCAAGCAGCATTTGTATGAAATCTCTCGAAACCCTTGATCTTTCTGGCTGCTCGAGTCTTGAGCAGTTTCCAGAGATTTCAGAAGTTGTGGAGAAACTATCATTGCTTAATTTGTCCAGGTCAAAAATTAAAGAACTGCCCTCGTCAATCAATAATCTCACGGGGTTGAGTCGTTTGGTCCTAGAAGATTGCAAGGAACTTCAGAGTCTTCCAAGCAGCATTTGTATGAAATCTCTCGAAACCCTTGATCTTTCTGGCTGCTCGAGTCTTGAGCAGTTTCCAGAGATTTCAGAAGTTGTGGAGAAACTATCATTGCTTAATTTGTCCAGGTCAAAAATTAAAGAACTGCCCTCGTCAATCAATAATCTCACGGGGTTGAGTCATTTGGTCCTAGAAGATTGCAAGGAACTTCAAAGTCTTCCAAGCAGCATTTGTATGAAATCTCTCGAAACCCTTGATCTTTCTGGCTGCTCGAGTCTTGAGCAGTTTCCAGAGATTTCAGAAGTTATGGAGAAACTATCGAAGCTTTATTTATCCAGGTCAAAAATTAAAGAACTGCCCTCGTCAATCAATAATCTCACGGGGTTGATTGATTTGGACCTAAAATATTGCAAGGAACTTCAGAGTCTTCCAAGCAGCATTTGTATGAAATCTCTCGAAACCCTTGATCTTTCTGGTTGCTCGAGTCTTGAGCAGTTTCCAGAGATTTCAGAAGTTATGGAGGAACTATCAAGGCTTAGTTTTTCTGGGTCAAAAATTAAAGAACTGCCCTCGTCAATCAATAATCTCACGGGGTTGCGTTTTTTGGTCTTAAAAGATTGCAAGGAACTTAAGAGTCTTCCAAGCAGCATTTGTATGAAATCTCTTCAAGCCCTTGATCTTTTTGGCTGCTTGAGTCTTGAGATGTTTCCAGATATTGCAGAGGTTATGGGGGGAGTACGAGAGCTTAATTTATCTGGGTCAAAAGTTAAAGAACTACCCTCGTCAATCAATAATCTCACGGGGTTGCGTTTTTTGGTCTTAAAAGATTGCAAGGAACTTAAGAGTCTTCCAAGCAGCATTTGTATGAAATCTCTTCAAGCCCTTGATCTTTTTGGCTGCTCGAGTCTTGAGATGTTTCCAGATATTGCAGAGGTTATGGGGGGAGTACTAGAGCTTAATTTATCTGGGTCAAAAGTTAAAGAACTACCCTCGTCAATCAATAATCTCACGGGGTTGCGTTTTTTGGTCTTAAAAGATTGCAAGGAACTTAAGAGTCTTCCAAGCAACATTTGTATGAAATCTGTTGAAGCGCTCGATCTTTCTGGCTGCTCGAGTCTTGAGCAGTTTCCAGAGATTTCAAAAGTTATGGAGAAACTATCAAAGCTTTACTTATCTGGGTCAAAAATTAAAGAACTGTCCTCGTCAATCAATAATCTCACGGGGTTGGCTGTTTTGCACCTAAAAGATTTCAAGGAACTTAAGAGTCTTCCAAGCAGCATTTGTATGAAATCTCTTGAAGCCCTTGATCTTTCTGGCTGCTCGAGTCTTGAGCAGTTTCCAGAGATTTCAGAAGTTATGGAGGAACTATCAAGGCTTAGTTTTTCTGGGTCAAAAATTAAAGAACTGCCCTCGTCAATTAATAATCTCACAAGATTGAATTATTTGGAGCTAAAAGATTGCAAGGAACTGACGAGTCTTCCAAACAGCATTTGTCAACTTAAGTACCTTAGAAAAATTACGCTTTCAGGTTGTACAAAATTTGAGGTGTTTCCACGCATTGAAGAAAATATGGAAGGGTTAAGAGAGCTTCACTTGGATGGAACATCTATCAAAGAGCTTCCCCCCTGTATTGAACTGCTTCAGGGGCTTGTGTTATTAAATTTGAGAAACTGCGAAAGCCTTGTACATCTTCCCAACACTCTCTGTAATTTGGTGCACCTTAAAGCTCTCAATCTCTGTGGGTGCCCGAATCTTTCTCAATTACCTCTCAACTTGGAGGATTTAGGACGCTTATGGGATAATGCAGTAGATTTTGATAACGGTCTTACATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1777

Amino Acids

198.66

Weight (kDa)

5.67

Isoelectric Point (pI)

48.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1361, 1677
AccB1I GGYRCC 2 cut(s) 2329, 5238
AccB7I CCANNNNNTGG 3 cut(s) 106, 676, 2260
AccII CGCG 2 cut(s) 1020, 1887
AciI CCGC 3 cut(s) 538, 1341, 1625
AclI AACGTT 1 cut(s) 771
AclWI GGATC 3 cut(s) 106, 695, 901
AcsI RAATTY 6 cut(s) 847, 1746, 2189, 2273, 5033, 5155
AcuI CTGAAG 9 cut(s) 1455, 2055, 2639, 2849, 3059, 3269, 3479, 3899, 5120
AcyI GRCGYC 1 cut(s) 513
AdeI CACNNNGTG 1 cut(s) 621
AfaI GTAC 8 cut(s) 5, 605, 1584, 4233, 4443, 5000, 5029, 5181
AfeI AGCGCT 1 cut(s) 4587
AfiI CCNNNNNNNGG 8 cut(s) 106, 676, 1629, 1630, 1631, 1778, 2017, 2260
AflII CTTAAG 7 cut(s) 2303, 2444, 4124, 4334, 4544, 4754, 4994
AjiI CACGTC 1 cut(s) 778
AjuI GAANNNNNNNTTGG 4 cut(s) 1302, 1334, 2174, 2206
AleI CACNNNNGTG 2 cut(s) 2103, 2327
AloI GAACNNNNNNTCC 2 cut(s) 1773, 1805
Alw21I GWGCWC 2 cut(s) 1807, 5214
Alw26I GTCTC 2 cut(s) 1822, 2147
Alw44I GTGCAC 1 cut(s) 5210
AlwI GGATC 3 cut(s) 106, 695, 901
AlwNI CAGNNNCTG 1 cut(s) 2260
Aor51HI AGCGCT 1 cut(s) 4587
AoxI GGCC 1 cut(s) 97
ApaLI GTGCAC 1 cut(s) 5210
ApoI RAATTY 6 cut(s) 847, 1746, 2189, 2273, 5033, 5155
AseI ATTAAT 3 cut(s) 200, 2394, 4914
Asp700I GAANNNNTTC 4 cut(s) 955, 1881, 1941, 5133
AspLEI GCGC 2 cut(s) 3054, 4588
AspS9I GGNCC 6 cut(s) 679, 2632, 2842, 3472, 3682, 3892
AsuHPI GGTGA 4 cut(s) 121, 1094, 1249, 2375
AvaII GGWCC 6 cut(s) 679, 2632, 2842, 3472, 3682, 3892
BaeGI GKGCMC 3 cut(s) 2112, 5214, 5243
BaeI ACNNNNGTAYC 2 cut(s) 4982, 5015
BanI GGYRCC 2 cut(s) 2329, 5238
BanII GRGCYC 1 cut(s) 1807
BarI GAAGNNNNNNTAC 2 cut(s) 1821, 1853
BauI CACGAG 1 cut(s) 3136
Bbv12I GWGCWC 2 cut(s) 1807, 5214
BccI CCATC 7 cut(s) 324, 474, 712, 1070, 2185, 2395, 5087
BceAI ACGGC 3 cut(s) 1499, 1983, 3203
BcgI CGANNNNNNTGC 4 cut(s) 439, 473, 728, 762
BciVI GTATCC 1 cut(s) 652
BclI TGATCA 1 cut(s) 183
BcoDI GTCTC 2 cut(s) 1822, 2147
BfmI CTRYAG 1 cut(s) 1971
BfoI RGCGCY 1 cut(s) 4589
BfrI CTTAAG 7 cut(s) 2303, 2444, 4124, 4334, 4544, 4754, 4994
BfuI GTATCC 1 cut(s) 652
BglII AGATCT 1 cut(s) 520
BmcAI AGTACT 1 cut(s) 4443
Bme18I GGWCC 6 cut(s) 679, 2632, 2842, 3472, 3682, 3892
BmgBI CACGTC 1 cut(s) 778
BmgT120I GGNCC 6 cut(s) 679, 2632, 2842, 3472, 3682, 3892
BmiI GGNNCC 5 cut(s) 681, 1905, 2251, 2331, 5240
BmsI GCATC 2 cut(s) 850, 1390
BoxI GACNNNNGTC 1 cut(s) 1758
BplI GAGNNNNNCTC 2 cut(s) 790, 822
BpmI CTGGAG 3 cut(s) 817, 1017, 2018
Bsa29I ATCGAT 3 cut(s) 196, 1797, 2280
BsaAI YACGTR 1 cut(s) 1586
BsaBI GATNNNNATC 1 cut(s) 911
BsaHI GRCGYC 1 cut(s) 513
BsaJI CCNNGG 2 cut(s) 1628, 1663
BsaWI WCCGGW 1 cut(s) 830
Bsc4I CCNNNNNNNGG 8 cut(s) 106, 676, 1629, 1630, 1631, 1778, 2017, 2260
Bse1I ACTGG 2 cut(s) 115, 1845
Bse3DI GCAATG 3 cut(s) 2975, 3395, 3605
Bse8I GATNNNNATC 1 cut(s) 911
BseCI ATCGAT 3 cut(s) 196, 1797, 2280
BseDI CCNNGG 2 cut(s) 1628, 1663
BseGI GGATG 5 cut(s) 704, 862, 988, 2177, 5098
BseJI GATNNNNATC 1 cut(s) 911
BseLI CCNNNNNNNGG 8 cut(s) 106, 676, 1629, 1630, 1631, 1778, 2017, 2260
BseMI GCAATG 3 cut(s) 2975, 3395, 3605
BseMII CTCAG 4 cut(s) 295, 1407, 1833, 2411
BseNI ACTGG 2 cut(s) 115, 1845
BseSI GKGCMC 3 cut(s) 2112, 5214, 5243
BsgI GTGCAG 2 cut(s) 1223, 3118
Bsh1236I CGCG 2 cut(s) 1020, 1887
Bsh1285I CGRYCG 3 cut(s) 196, 538, 1801
BshFI GGCC 1 cut(s) 99
BshNI GGYRCC 2 cut(s) 2329, 5238
BshVI ATCGAT 3 cut(s) 196, 1797, 2280
BsiEI CGRYCG 3 cut(s) 196, 538, 1801
BsiHKAI GWGCWC 2 cut(s) 1807, 5214
BsiSI CCGG 1 cut(s) 831
BslFI GGGAC 1 cut(s) 665
BslI CCNNNNNNNGG 8 cut(s) 106, 676, 1629, 1630, 1631, 1778, 2017, 2260
BsmAI GTCTC 2 cut(s) 1822, 2147
BsmFI GGGAC 1 cut(s) 665
BsmI GAATGC 1 cut(s) 656
BsnI GGCC 1 cut(s) 99
Bsp1286I GDGCHC 4 cut(s) 1807, 2112, 5214, 5243
Bsp1407I TGTACA 2 cut(s) 5027, 5179
Bsp19I CCATGG 1 cut(s) 1663
Bsp68I TCGCGA 1 cut(s) 1887
BspACI CCGC 3 cut(s) 538, 1341, 1625
BspANI GGCC 1 cut(s) 99
BspCNI CTCAG 4 cut(s) 294, 1408, 1832, 2412
BspDI ATCGAT 3 cut(s) 196, 1797, 2280
BspFNI CGCG 2 cut(s) 1020, 1887
BspHI TCATGA 1 cut(s) 1140
BspLI GGNNCC 5 cut(s) 681, 1905, 2251, 2331, 5240
BspPI GGATC 3 cut(s) 106, 695, 901
BspT107I GGYRCC 2 cut(s) 2329, 5238
BspTI CTTAAG 7 cut(s) 2303, 2444, 4124, 4334, 4544, 4754, 4994
BsrDI GCAATG 3 cut(s) 2975, 3395, 3605
BsrGI TGTACA 2 cut(s) 5027, 5179
BsrI ACTGG 2 cut(s) 115, 1845
BssECI CCNNGG 2 cut(s) 1628, 1663
BssNI GRCGYC 1 cut(s) 513
BssSI CACGAG 1 cut(s) 3136
BssT1I CCWWGG 1 cut(s) 1663
Bst2BI CACGAG 1 cut(s) 3136
Bst4CI ACNGT 6 cut(s) 1582, 1757, 1816, 3222, 4692, 5318
Bst6I CTCTTC 4 cut(s) 361, 1824, 4164, 4374
BstACI GRCGYC 1 cut(s) 513
BstAFI CTTAAG 7 cut(s) 2303, 2444, 4124, 4334, 4544, 4754, 4994
BstAPI GCANNNNNTGC 1 cut(s) 973
BstAUI TGTACA 2 cut(s) 5027, 5179
BstBAI YACGTR 1 cut(s) 1586
BstDSI CCRYGG 1 cut(s) 1663
BstF5I GGATG 5 cut(s) 704, 862, 988, 2177, 5098
BstFNI CGCG 2 cut(s) 1020, 1887
BstH2I RGCGCY 1 cut(s) 4589
BstHHI GCGC 2 cut(s) 3054, 4588
BstMAI GTCTC 2 cut(s) 1822, 2147
BstMCI CGRYCG 3 cut(s) 196, 538, 1801
BstMWI GCNNNNNNNGC 5 cut(s) 312, 462, 973, 1976, 5140
BstNSI RCATGY 2 cut(s) 1710, 2218
BstPAI GACNNNNGTC 1 cut(s) 1758
BstSFI CTRYAG 1 cut(s) 1971
BstSLI GKGCMC 3 cut(s) 2112, 5214, 5243
BstUI CGCG 2 cut(s) 1020, 1887
BstX2I RGATCY 1 cut(s) 520
BstXI CCANNNNNNTGG 1 cut(s) 2105
BstYI RGATCY 1 cut(s) 520
Bsu15I ATCGAT 3 cut(s) 196, 1797, 2280
BsuI GTATCC 1 cut(s) 652
BsuRI GGCC 1 cut(s) 99
BsuTUI ATCGAT 3 cut(s) 196, 1797, 2280
BtgI CCRYGG 1 cut(s) 1663
BtgZI GCGATG 2 cut(s) 162, 1048
BtrI CACGTC 1 cut(s) 778
BtsCI GGATG 5 cut(s) 704, 862, 988, 2177, 5098
BtsI GCAGTG 1 cut(s) 1986
BtsIMutI CAGTG 1 cut(s) 1986
BtuMI TCGCGA 1 cut(s) 1887
CaiI CAGNNNCTG 1 cut(s) 2260
CciI TCATGA 1 cut(s) 1140
CfoI GCGC 2 cut(s) 3054, 4588
Cfr13I GGNCC 6 cut(s) 679, 2632, 2842, 3472, 3682, 3892
ClaI ATCGAT 3 cut(s) 196, 1797, 2280
CseI GACGC 5 cut(s) 323, 473, 521, 2266, 5292
Csp6I GTAC 8 cut(s) 4, 604, 1583, 4232, 4442, 4999, 5028, 5180
CspCI CAANNNNNGTGG 2 cut(s) 5215, 5250
CviQI GTAC 8 cut(s) 4, 604, 1583, 4232, 4442, 4999, 5028, 5180
DraI TTTAAA 1 cut(s) 1717
DraIII CACNNNGTG 1 cut(s) 621
Eam1104I CTCTTC 4 cut(s) 361, 1824, 4164, 4374
EarI CTCTTC 4 cut(s) 361, 1824, 4164, 4374
Ecl136II GAGCTC 1 cut(s) 1805
Eco130I CCWWGG 1 cut(s) 1663
Eco24I GRGCYC 1 cut(s) 1807
Eco47I GGWCC 6 cut(s) 679, 2632, 2842, 3472, 3682, 3892
Eco47III AGCGCT 1 cut(s) 4587
Eco53kI GAGCTC 1 cut(s) 1805
Eco57I CTGAAG 9 cut(s) 1455, 2055, 2639, 2849, 3059, 3269, 3479, 3899, 5120
EcoICRI GAGCTC 1 cut(s) 1805
EcoT14I CCWWGG 1 cut(s) 1663
EcoT22I ATGCAT 2 cut(s) 978, 1851
EcoT38I GRGCYC 1 cut(s) 1807
ErhI CCWWGG 1 cut(s) 1663
FalI AAGNNNNNCTT 4 cut(s) 1302, 1334, 4649, 4681
FaqI GGGAC 1 cut(s) 665
FauI CCCGC 1 cut(s) 1632
FbaI TGATCA 1 cut(s) 183
FokI GGATG 5 cut(s) 691, 869, 975, 2164, 5105
FriOI GRGCYC 1 cut(s) 1807
GlaI GCGC 2 cut(s) 3053, 4587
GsuI CTGGAG 3 cut(s) 817, 1017, 2018
HaeII RGCGCY 1 cut(s) 4589
HaeIII GGCC 1 cut(s) 99
HapII CCGG 1 cut(s) 831
HgaI GACGC 5 cut(s) 323, 473, 521, 2266, 5292
HhaI GCGC 2 cut(s) 3054, 4588
Hin1I GRCGYC 1 cut(s) 513
Hin6I GCGC 2 cut(s) 3052, 4586
HinP1I GCGC 2 cut(s) 3052, 4586
HincII GTYRAC 2 cut(s) 775, 4991
HindII GTYRAC 2 cut(s) 775, 4991
HindIII AAGCTT 8 cut(s) 741, 1104, 1311, 1657, 2037, 2558, 3818, 4658
HpaII CCGG 1 cut(s) 831
HphI GGTGA 4 cut(s) 121, 1094, 1249, 2375
Hpy166II GTNNAC 5 cut(s) 775, 1291, 2383, 4991, 5212
Hpy8I GTNNAC 5 cut(s) 775, 1291, 2383, 4991, 5212
Hpy99I CGWCG 1 cut(s) 641
HpyCH4III ACNGT 6 cut(s) 1582, 1757, 1816, 3222, 4692, 5318
HpyCH4IV ACGT 4 cut(s) 771, 777, 1585, 2168
HpyF10VI GCNNNNNNNGC 5 cut(s) 312, 462, 973, 1976, 5140
HpySE526I ACGT 4 cut(s) 771, 777, 1585, 2168
Hsp92I GRCGYC 1 cut(s) 513
HspAI GCGC 2 cut(s) 3052, 4586
Ksp22I TGATCA 1 cut(s) 183
LmnI GCTCC 3 cut(s) 1559, 1903, 4942
LweI GCATC 2 cut(s) 850, 1390
MaeII ACGT 4 cut(s) 771, 777, 1585, 2168
MflI RGATCY 1 cut(s) 520
MhlI GDGCHC 4 cut(s) 1807, 2112, 5214, 5243
MmeI TCCRAC 5 cut(s) 928, 1006, 1236, 2109, 2205
Mph1103I ATGCAT 2 cut(s) 978, 1851
MroXI GAANNNNTTC 4 cut(s) 955, 1881, 1941, 5133
MspCI CTTAAG 7 cut(s) 2303, 2444, 4124, 4334, 4544, 4754, 4994
MspI CCGG 1 cut(s) 831
Mva1269I GAATGC 1 cut(s) 656
MvnI CGCG 2 cut(s) 1020, 1887
MwoI GCNNNNNNNGC 5 cut(s) 312, 462, 973, 1976, 5140
NcoI CCATGG 1 cut(s) 1663
NlaIV GGNNCC 5 cut(s) 681, 1905, 2251, 2331, 5240
NruI TCGCGA 1 cut(s) 1887
NsiI ATGCAT 2 cut(s) 978, 1851
NspI RCATGY 2 cut(s) 1710, 2218
OliI CACNNNNGTG 2 cut(s) 2103, 2327
PagI TCATGA 1 cut(s) 1140
PcsI WCGNNNNNNNCGW 2 cut(s) 705, 1187
PctI GAATGC 1 cut(s) 656
PdmI GAANNNNTTC 4 cut(s) 955, 1881, 1941, 5133
PfeI GAWTC 7 cut(s) 562, 839, 956, 1353, 1892, 2157, 5245
PflMI CCANNNNNTGG 3 cut(s) 106, 676, 2260
Ple19I CGATCG 2 cut(s) 196, 1801
Ppu21I YACGTR 1 cut(s) 1586
PshAI GACNNNNGTC 1 cut(s) 1758
PshBI ATTAAT 3 cut(s) 200, 2394, 4914
PsiI TTATAA 2 cut(s) 1361, 1677
Psp124BI GAGCTC 1 cut(s) 1807
Psp1406I AACGTT 1 cut(s) 771
PspN4I GGNNCC 5 cut(s) 681, 1905, 2251, 2331, 5240
PspPI GGNCC 6 cut(s) 679, 2632, 2842, 3472, 3682, 3892
PstNI CAGNNNCTG 1 cut(s) 2260
PsuI RGATCY 1 cut(s) 520
PvuI CGATCG 2 cut(s) 196, 1801
RruI TCGCGA 1 cut(s) 1887
RsaI GTAC 8 cut(s) 5, 605, 1584, 4233, 4443, 5000, 5029, 5181
RsaNI GTAC 8 cut(s) 4, 604, 1583, 4232, 4442, 4999, 5028, 5180
SacI GAGCTC 1 cut(s) 1807
Sau96I GGNCC 6 cut(s) 679, 2632, 2842, 3472, 3682, 3892
ScaI AGTACT 1 cut(s) 4443
SduI GDGCHC 4 cut(s) 1807, 2112, 5214, 5243
SfaNI GCATC 2 cut(s) 850, 1390
SfcI CTRYAG 1 cut(s) 1971
SinI GGWCC 6 cut(s) 679, 2632, 2842, 3472, 3682, 3892
SsiI CCGC 3 cut(s) 538, 1341, 1625
SspI AATATT 1 cut(s) 3902
SstI GAGCTC 1 cut(s) 1807
StyI CCWWGG 1 cut(s) 1663
TaaI ACNGT 6 cut(s) 1582, 1757, 1816, 3222, 4692, 5318
TaiI ACGT 4 cut(s) 774, 780, 1588, 2171
TatI WGTACW 4 cut(s) 3, 4441, 5027, 5179
TfiI GAWTC 7 cut(s) 562, 839, 956, 1353, 1892, 2157, 5245
TscAI CASTG 1 cut(s) 1986
TspRI CASTG 1 cut(s) 1986
Van91I CCANNNNNTGG 3 cut(s) 106, 676, 2260
Vha464I CTTAAG 7 cut(s) 2303, 2444, 4124, 4334, 4544, 4754, 4994
VneI GTGCAC 1 cut(s) 5210
VpaK11BI GGWCC 6 cut(s) 679, 2632, 2842, 3472, 3682, 3892
VspI ATTAAT 3 cut(s) 200, 2394, 4914
XapI RAATTY 6 cut(s) 847, 1746, 2189, 2273, 5033, 5155
XbaI TCTAGA 2 cut(s) 1279, 1696
XceI RCATGY 2 cut(s) 1710, 2218
XcmI CCANNNNNNNNNTGG 1 cut(s) 2019
XmnI GAANNNNTTC 4 cut(s) 955, 1881, 1941, 5133
ZrmI AGTACT 1 cut(s) 4443
Zsp2I ATGCAT 2 cut(s) 978, 1851
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.