TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 976 |
| AccB1I | GGYRCC | 1 cut(s) | 398 |
| AccI | GTMKAC | 1 cut(s) | 1047 |
| AccII | CGCG | 1 cut(s) | 1066 |
| AccIII | TCCGGA | 1 cut(s) | 268 |
| AciI | CCGC | 7 cut(s) | 195, 301, 534, 959, 980, 1064, 1066 |
| AclWI | GGATC | 1 cut(s) | 773 |
| AcsI | RAATTY | 3 cut(s) | 596, 634, 816 |
| AcyI | GRCGYC | 2 cut(s) | 261, 399 |
| AfaI | GTAC | 4 cut(s) | 42, 69, 80, 842 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 232 |
| AflIII | ACRYGT | 1 cut(s) | 727 |
| AgsI | TTSAA | 3 cut(s) | 454, 590, 743 |
| AjnI | CCWGG | 1 cut(s) | 694 |
| AluBI | AGCT | 4 cut(s) | 108, 529, 782, 949 |
| AluI | AGCT | 4 cut(s) | 108, 529, 782, 949 |
| Alw21I | GWGCWC | 2 cut(s) | 867, 951 |
| Alw26I | GTCTC | 2 cut(s) | 191, 680 |
| AlwI | GGATC | 1 cut(s) | 773 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 49 |
| Ama87I | CYCGRG | 1 cut(s) | 23 |
| Aor13HI | TCCGGA | 1 cut(s) | 268 |
| AoxI | GGCC | 3 cut(s) | 20, 336, 470 |
| ApoI | RAATTY | 3 cut(s) | 596, 634, 816 |
| AseI | ATTAAT | 1 cut(s) | 542 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 582 |
| AspLEI | GCGC | 1 cut(s) | 401 |
| AspS9I | GGNCC | 4 cut(s) | 21, 280, 691, 1025 |
| AsuC2I | CCSGG | 2 cut(s) | 227, 482 |
| AsuHPI | GGTGA | 1 cut(s) | 107 |
| AvaI | CYCGRG | 1 cut(s) | 23 |
| AvaII | GGWCC | 3 cut(s) | 280, 691, 1025 |
| BanI | GGYRCC | 1 cut(s) | 398 |
| BanII | GRGCYC | 1 cut(s) | 951 |
| BbsI | GAAGAC | 1 cut(s) | 731 |
| Bbv12I | GWGCWC | 2 cut(s) | 867, 951 |
| BbvCI | CCTCAGC | 1 cut(s) | 654 |
| BccI | CCATC | 5 cut(s) | 146, 176, 316, 485, 938 |
| BceAI | ACGGC | 5 cut(s) | 76, 190, 274, 502, 972 |
| BciT130I | CCWGG | 1 cut(s) | 696 |
| BcnI | CCSGG | 2 cut(s) | 227, 482 |
| BcoDI | GTCTC | 2 cut(s) | 191, 680 |
| BfoI | RGCGCY | 1 cut(s) | 402 |
| BfuAI | ACCTGC | 1 cut(s) | 976 |
| BisI | GCNGC | 1 cut(s) | 195 |
| BlsI | GCNGC | 1 cut(s) | 196 |
| Bme1390I | CCNGG | 3 cut(s) | 227, 482, 696 |
| Bme18I | GGWCC | 3 cut(s) | 280, 691, 1025 |
| BmeT110I | CYCGRG | 1 cut(s) | 23 |
| BmgT120I | GGNCC | 4 cut(s) | 21, 280, 691, 1025 |
| BmiI | GGNNCC | 3 cut(s) | 400, 693, 1026 |
| BmrFI | CCNGG | 3 cut(s) | 227, 482, 696 |
| BmsI | GCATC | 1 cut(s) | 72 |
| BoxI | GACNNNNGTC | 1 cut(s) | 183 |
| BpiI | GAAGAC | 1 cut(s) | 731 |
| Bpu10I | CCTNAGC | 1 cut(s) | 654 |
| BpuMI | CCSGG | 2 cut(s) | 227, 482 |
| BsaHI | GRCGYC | 2 cut(s) | 261, 399 |
| BsaI | GGTCTC | 2 cut(s) | 191, 680 |
| BsaJI | CCNNGG | 4 cut(s) | 256, 565, 694, 1064 |
| BsaWI | WCCGGW | 1 cut(s) | 268 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 232 |
| Bse118I | RCCGGY | 2 cut(s) | 937, 1002 |
| Bse1I | ACTGG | 1 cut(s) | 900 |
| Bse3DI | GCAATG | 1 cut(s) | 843 |
| BseAI | TCCGGA | 1 cut(s) | 268 |
| BseBI | CCWGG | 1 cut(s) | 696 |
| BseDI | CCNNGG | 4 cut(s) | 256, 565, 694, 1064 |
| BseGI | GGATG | 2 cut(s) | 132, 477 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 232 |
| BseMI | GCAATG | 1 cut(s) | 843 |
| BseMII | CTCAG | 2 cut(s) | 228, 668 |
| BseNI | ACTGG | 1 cut(s) | 900 |
| BseYI | CCCAGC | 1 cut(s) | 874 |
| BsgI | GTGCAG | 1 cut(s) | 954 |
| Bsh1236I | CGCG | 1 cut(s) | 1066 |
| Bsh1285I | CGRYCG | 1 cut(s) | 76 |
| BshFI | GGCC | 3 cut(s) | 22, 338, 472 |
| BshNI | GGYRCC | 1 cut(s) | 398 |
| BsiEI | CGRYCG | 1 cut(s) | 76 |
| BsiHKAI | GWGCWC | 2 cut(s) | 867, 951 |
| BsiHKCI | CYCGRG | 1 cut(s) | 23 |
| BsiSI | CCGG | 5 cut(s) | 226, 269, 482, 938, 1003 |
| BslFI | GGGAC | 1 cut(s) | 31 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 232 |
| BsmAI | GTCTC | 2 cut(s) | 191, 680 |
| BsmFI | GGGAC | 1 cut(s) | 31 |
| BsmI | GAATGC | 1 cut(s) | 899 |
| BsnI | GGCC | 3 cut(s) | 22, 338, 472 |
| Bso31I | GGTCTC | 2 cut(s) | 191, 680 |
| BsoBI | CYCGRG | 1 cut(s) | 23 |
| Bsp1286I | GDGCHC | 2 cut(s) | 867, 951 |
| Bsp13I | TCCGGA | 1 cut(s) | 268 |
| Bsp1407I | TGTACA | 1 cut(s) | 840 |
| Bsp143I | GATC | 4 cut(s) | 73, 112, 765, 811 |
| BspACI | CCGC | 7 cut(s) | 195, 301, 534, 959, 980, 1064, 1066 |
| BspANI | GGCC | 3 cut(s) | 22, 338, 472 |
| BspCNI | CTCAG | 2 cut(s) | 227, 667 |
| BspEI | TCCGGA | 1 cut(s) | 268 |
| BspFNI | CGCG | 1 cut(s) | 1066 |
| BspLI | GGNNCC | 3 cut(s) | 400, 693, 1026 |
| BspMI | ACCTGC | 1 cut(s) | 976 |
| BspPI | GGATC | 1 cut(s) | 773 |
| BspT107I | GGYRCC | 1 cut(s) | 398 |
| BspTNI | GGTCTC | 2 cut(s) | 191, 680 |
| BsrDI | GCAATG | 1 cut(s) | 843 |
| BsrFI | RCCGGY | 2 cut(s) | 937, 1002 |
| BsrGI | TGTACA | 1 cut(s) | 840 |
| BsrI | ACTGG | 1 cut(s) | 900 |
| BssAI | RCCGGY | 2 cut(s) | 937, 1002 |
| BssECI | CCNNGG | 4 cut(s) | 256, 565, 694, 1064 |
| BssMI | GATC | 4 cut(s) | 73, 112, 765, 811 |
| BssNI | GRCGYC | 2 cut(s) | 261, 399 |
| BssT1I | CCWWGG | 1 cut(s) | 565 |
| Bst2UI | CCWGG | 1 cut(s) | 696 |
| Bst4CI | ACNGT | 5 cut(s) | 45, 276, 761, 772, 891 |
| BstACI | GRCGYC | 2 cut(s) | 261, 399 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 862 |
| BstAUI | TGTACA | 1 cut(s) | 840 |
| BstC8I | GCNNGC | 2 cut(s) | 223, 380 |
| BstDEI | CTNAG | 3 cut(s) | 214, 626, 654 |
| BstDSI | CCRYGG | 2 cut(s) | 256, 1064 |
| BstF5I | GGATG | 2 cut(s) | 132, 477 |
| BstFNI | CGCG | 1 cut(s) | 1066 |
| BstH2I | RGCGCY | 1 cut(s) | 402 |
| BstHHI | GCGC | 1 cut(s) | 401 |
| BstKTI | GATC | 4 cut(s) | 76, 115, 768, 814 |
| BstMAI | GTCTC | 2 cut(s) | 191, 680 |
| BstMBI | GATC | 4 cut(s) | 73, 112, 765, 811 |
| BstMCI | CGRYCG | 1 cut(s) | 76 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 203, 788, 862 |
| BstNI | CCWGG | 1 cut(s) | 696 |
| BstNSI | RCATGY | 1 cut(s) | 731 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 183 |
| BstSCI | CCNGG | 3 cut(s) | 225, 480, 694 |
| BstUI | CGCG | 1 cut(s) | 1066 |
| BstV2I | GAAGAC | 1 cut(s) | 731 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 18 |
| BsuRI | GGCC | 3 cut(s) | 22, 338, 472 |
| BtgI | CCRYGG | 2 cut(s) | 256, 1064 |
| BtsCI | GGATG | 2 cut(s) | 132, 477 |
| BtsIMutI | CAGTG | 3 cut(s) | 89, 768, 893 |
| BveI | ACCTGC | 1 cut(s) | 976 |
| Cac8I | GCNNGC | 2 cut(s) | 223, 380 |
| CaiI | CAGNNNCTG | 1 cut(s) | 49 |
| CfoI | GCGC | 1 cut(s) | 401 |
| Cfr10I | RCCGGY | 2 cut(s) | 937, 1002 |
| Cfr13I | GGNCC | 4 cut(s) | 21, 280, 691, 1025 |
| Cfr42I | CCGCGG | 1 cut(s) | 1067 |
| CseI | GACGC | 2 cut(s) | 250, 295 |
| Csp6I | GTAC | 4 cut(s) | 41, 68, 79, 841 |
| CviAII | CATG | 3 cut(s) | 703, 728, 788 |
| CviQI | GTAC | 4 cut(s) | 41, 68, 79, 841 |
| DdeI | CTNAG | 3 cut(s) | 214, 626, 654 |
| DinI | GGCGCC | 1 cut(s) | 400 |
| DpnI | GATC | 4 cut(s) | 75, 114, 767, 813 |
| DpnII | GATC | 4 cut(s) | 73, 112, 765, 811 |
| EciI | GGCGGA | 1 cut(s) | 974 |
| Ecl136II | GAGCTC | 1 cut(s) | 949 |
| Eco130I | CCWWGG | 1 cut(s) | 565 |
| Eco147I | AGGCCT | 1 cut(s) | 338 |
| Eco24I | GRGCYC | 1 cut(s) | 951 |
| Eco31I | GGTCTC | 2 cut(s) | 191, 680 |
| Eco47I | GGWCC | 3 cut(s) | 280, 691, 1025 |
| Eco53kI | GAGCTC | 1 cut(s) | 949 |
| Eco88I | CYCGRG | 1 cut(s) | 23 |
| EcoICRI | GAGCTC | 1 cut(s) | 949 |
| EcoRII | CCWGG | 1 cut(s) | 694 |
| EcoT14I | CCWWGG | 1 cut(s) | 565 |
| EcoT38I | GRGCYC | 1 cut(s) | 951 |
| EgeI | GGCGCC | 1 cut(s) | 400 |
| EheI | GGCGCC | 1 cut(s) | 400 |
| ErhI | CCWWGG | 1 cut(s) | 565 |
| FaeI | CATG | 3 cut(s) | 706, 731, 791 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 570, 602 |
| FaqI | GGGAC | 1 cut(s) | 31 |
| FatI | CATG | 3 cut(s) | 702, 727, 787 |
| FauI | CCCGC | 4 cut(s) | 294, 527, 987, 1059 |
| FblI | GTMKAC | 1 cut(s) | 1047 |
| Fnu4HI | GCNGC | 1 cut(s) | 195 |
| FokI | GGATG | 2 cut(s) | 119, 464 |
| FriOI | GRGCYC | 1 cut(s) | 951 |
| Fsp4HI | GCNGC | 1 cut(s) | 195 |
| GlaI | GCGC | 1 cut(s) | 400 |
| GluI | GCNGC | 1 cut(s) | 195 |
| GsaI | CCCAGC | 1 cut(s) | 878 |
| HaeII | RGCGCY | 1 cut(s) | 402 |
| HaeIII | GGCC | 3 cut(s) | 22, 338, 472 |
| HapII | CCGG | 5 cut(s) | 226, 269, 482, 938, 1003 |
| HgaI | GACGC | 2 cut(s) | 250, 295 |
| HhaI | GCGC | 1 cut(s) | 401 |
| Hin1I | GRCGYC | 2 cut(s) | 261, 399 |
| Hin1II | CATG | 3 cut(s) | 706, 731, 791 |
| Hin6I | GCGC | 1 cut(s) | 399 |
| HinP1I | GCGC | 1 cut(s) | 399 |
| HincII | GTYRAC | 1 cut(s) | 1048 |
| HindII | GTYRAC | 1 cut(s) | 1048 |
| HinfI | GANTC | 1 cut(s) | 1049 |
| HpaII | CCGG | 5 cut(s) | 226, 269, 482, 938, 1003 |
| HphI | GGTGA | 1 cut(s) | 107 |
| Hpy166II | GTNNAC | 3 cut(s) | 253, 871, 1048 |
| Hpy188III | TCNNGA | 2 cut(s) | 269, 407 |
| Hpy8I | GTNNAC | 3 cut(s) | 253, 871, 1048 |
| Hpy99I | CGWCG | 1 cut(s) | 182 |
| HpyAV | CCTTC | 7 cut(s) | 286, 359, 440, 448, 483, 541, 1024 |
| HpyCH4III | ACNGT | 5 cut(s) | 45, 276, 761, 772, 891 |
| HpyCH4V | TGCA | 2 cut(s) | 836, 971 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 203, 788, 862 |
| HpyF3I | CTNAG | 3 cut(s) | 214, 626, 654 |
| Hsp92I | GRCGYC | 2 cut(s) | 261, 399 |
| Hsp92II | CATG | 3 cut(s) | 706, 731, 791 |
| HspAI | GCGC | 1 cut(s) | 399 |
| KasI | GGCGCC | 1 cut(s) | 398 |
| Kpn2I | TCCGGA | 1 cut(s) | 268 |
| KspI | CCGCGG | 1 cut(s) | 1067 |
| Kzo9I | GATC | 4 cut(s) | 73, 112, 765, 811 |
| LmnI | GCTCC | 3 cut(s) | 113, 375, 787 |
| LweI | GCATC | 1 cut(s) | 72 |
| MaeIII | GTNAC | 4 cut(s) | 416, 891, 920, 952 |
| MalI | GATC | 4 cut(s) | 75, 114, 767, 813 |
| MboI | GATC | 4 cut(s) | 73, 112, 765, 811 |
| MboII | GAAGA | 5 cut(s) | 431, 578, 590, 731, 895 |
| MhlI | GDGCHC | 2 cut(s) | 867, 951 |
| MluCI | AATT | 4 cut(s) | 4, 596, 634, 816 |
| Mly113I | GGCGCC | 1 cut(s) | 399 |
| MlyI | GAGTC | 1 cut(s) | 1043 |
| MmeI | TCCRAC | 3 cut(s) | 175, 258, 743 |
| MnlI | CCTC | 8 cut(s) | 211, 507, 568, 596, 663, 674, 692, 1014 |
| MroI | TCCGGA | 1 cut(s) | 268 |
| MroXI | GAANNNNTTC | 1 cut(s) | 582 |
| MseI | TTAA | 2 cut(s) | 542, 827 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1016 |
| MspA1I | CMGCKG | 1 cut(s) | 1066 |
| MspI | CCGG | 5 cut(s) | 226, 269, 482, 938, 1003 |
| MspR9I | CCNGG | 3 cut(s) | 227, 482, 696 |
| Mva1269I | GAATGC | 1 cut(s) | 899 |
| MvaI | CCWGG | 1 cut(s) | 696 |
| MvnI | CGCG | 1 cut(s) | 1066 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 203, 788, 862 |
| NarI | GGCGCC | 1 cut(s) | 399 |
| NciI | CCSGG | 2 cut(s) | 227, 482 |
| NdeII | GATC | 4 cut(s) | 73, 112, 765, 811 |
| NlaIII | CATG | 3 cut(s) | 706, 731, 791 |
| NlaIV | GGNNCC | 3 cut(s) | 400, 693, 1026 |
| NmuCI | GTSAC | 4 cut(s) | 416, 891, 920, 952 |
| NspI | RCATGY | 1 cut(s) | 731 |
| PceI | AGGCCT | 1 cut(s) | 338 |
| PciI | ACATGT | 1 cut(s) | 727 |
| PctI | GAATGC | 1 cut(s) | 899 |
| PdmI | GAANNNNTTC | 1 cut(s) | 582 |
| PfoI | TCCNGGA | 1 cut(s) | 480 |
| PkrI | GCNGC | 1 cut(s) | 196 |
| Ple19I | CGATCG | 1 cut(s) | 76 |
| PleI | GAGTC | 1 cut(s) | 1043 |
| PluTI | GGCGCC | 1 cut(s) | 402 |
| PpsI | GAGTC | 1 cut(s) | 1043 |
| PscI | ACATGT | 1 cut(s) | 727 |
| PshAI | GACNNNNGTC | 1 cut(s) | 183 |
| PshBI | ATTAAT | 1 cut(s) | 542 |
| Psp124BI | GAGCTC | 1 cut(s) | 951 |
| Psp6I | CCWGG | 1 cut(s) | 694 |
| PspFI | CCCAGC | 1 cut(s) | 874 |
| PspGI | CCWGG | 1 cut(s) | 694 |
| PspN4I | GGNNCC | 3 cut(s) | 400, 693, 1026 |
| PspPI | GGNCC | 4 cut(s) | 21, 280, 691, 1025 |
| PstNI | CAGNNNCTG | 1 cut(s) | 49 |
| PvuI | CGATCG | 1 cut(s) | 76 |
| RsaI | GTAC | 4 cut(s) | 42, 69, 80, 842 |
| RsaNI | GTAC | 4 cut(s) | 41, 68, 79, 841 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1016 |
| SacI | GAGCTC | 1 cut(s) | 951 |
| SacII | CCGCGG | 1 cut(s) | 1067 |
| SalI | GTCGAC | 1 cut(s) | 1046 |
| SaqAI | TTAA | 2 cut(s) | 542, 827 |
| SatI | GCNGC | 1 cut(s) | 195 |
| Sau3AI | GATC | 4 cut(s) | 73, 112, 765, 811 |
| Sau96I | GGNCC | 4 cut(s) | 21, 280, 691, 1025 |
| SchI | GAGTC | 1 cut(s) | 1043 |
| ScrFI | CCNGG | 3 cut(s) | 227, 482, 696 |
| SduI | GDGCHC | 2 cut(s) | 867, 951 |
| SfaNI | GCATC | 1 cut(s) | 72 |
| SfoI | GGCGCC | 1 cut(s) | 400 |
| Sfr303I | CCGCGG | 1 cut(s) | 1067 |
| SgrBI | CCGCGG | 1 cut(s) | 1067 |
| SinI | GGWCC | 3 cut(s) | 280, 691, 1025 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1016 |
| Sse9I | AATT | 4 cut(s) | 4, 596, 634, 816 |
| SseBI | AGGCCT | 1 cut(s) | 338 |
| SsiI | CCGC | 7 cut(s) | 195, 301, 534, 959, 980, 1064, 1066 |
| SspDI | GGCGCC | 1 cut(s) | 398 |
| SstI | GAGCTC | 1 cut(s) | 951 |
| StuI | AGGCCT | 1 cut(s) | 338 |
| StyD4I | CCNGG | 3 cut(s) | 225, 480, 694 |
| StyI | CCWWGG | 1 cut(s) | 565 |
| TaaI | ACNGT | 5 cut(s) | 45, 276, 761, 772, 891 |
| TaqI | TCGA | 3 cut(s) | 144, 933, 1047 |
| TasI | AATT | 4 cut(s) | 4, 596, 634, 816 |
| TatI | WGTACW | 2 cut(s) | 40, 840 |
| TauI | GCSGC | 1 cut(s) | 197 |
| Tru1I | TTAA | 2 cut(s) | 542, 827 |
| Tru9I | TTAA | 2 cut(s) | 542, 827 |
| TscAI | CASTG | 3 cut(s) | 96, 775, 900 |
| TseFI | GTSAC | 4 cut(s) | 416, 891, 920, 952 |
| Tsp45I | GTSAC | 4 cut(s) | 416, 891, 920, 952 |
| TspDTI | ATGAA | 5 cut(s) | 17, 344, 378, 560, 738 |
| TspGWI | ACGGA | 3 cut(s) | 110, 179, 432 |
| TspRI | CASTG | 3 cut(s) | 96, 775, 900 |
| VpaK11BI | GGWCC | 3 cut(s) | 280, 691, 1025 |
| VspI | ATTAAT | 1 cut(s) | 542 |
| XapI | RAATTY | 3 cut(s) | 596, 634, 816 |
| XceI | RCATGY | 1 cut(s) | 731 |
| XmiI | GTMKAC | 1 cut(s) | 1047 |
| XmnI | GAANNNNTTC | 1 cut(s) | 582 |