Rmu_sc0009606.1_g000011

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009606.1
OG0000067
Physical Location & Seq
Reverse (-)
36848 .. 41318
4471 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009606.1_g000011.1.cds

Sequence Viewer

Length: 1941 bp
atggcttccctagaactggacagccttcccttcggagaccgtacgtactccgcctcgacgatcactctctcacggtaccttccggctgaaagccttatctcgctcaacaactcggcgaccccaatttacgccgacgggtcgttgatcatcccagcaccagcaggttcttcgaccggtatcagggatgatgccgacctcattgagcgtattgtaaatgatgtatttgatagagtgaattggatctcgccacgtagggagggtggcttggttgcaatggattctcatctgcatcaagtgggacgactattatccgctgcgcctgatgatgttgcctatgttggaatctggggaatgggcggcttgggtaaaacaaccattgccagggctgtttattacacaatttctcatcaatttgatcaccgttgctttttggaaaatgtgagggaaggcttcagcagttacggtcaagtacaaatgcaacttcaatttctatctggaatctttaagggaatggtcaacagtttcgatgggggttacatgactatgttggaaaggctaggtcggataaaaattctagttgttctcgacgatgtatcccgttccttggaaattgatgccttactcggaagcccaaaggaacgttcacttggttgtggtagtaaagtcattgtaacaactagagatgaacaagtactaggtggatttaggaaatacaagcccaagccattaagtgatcctgacgctcttgaactcttcaaccagaatgccttcagaaaaatgccaccctcagaagagtacgttcatctctcaagacgtgcaatcaaatatgctcacggtctgcctttagcacttaaaacctggggagctcatcttcgtgacagaagtccatctgtgtggaaagatgagttggagaaaataaagaaaatcccagacctagatattcaccatgtgcaccatgtgcttagaagaagctttgatggactagatgagtaccaaaagaacatatttctagatatcgcatgttttttcaaaggaatgcacatagagtatgtagaaattattctgaacagttgtggcttctttgccagcagtggtttaagcgttctaattgacagagctcttgtaagtatctcaaggtttggtgagctcgagatacatgatttcctacaggaaattggtaggcatatcgtctgcaaagaaccttggaagcatagtagattatggagttatgaagatgttcaggataccttaacacaaaataaggctatggaagttgaaggcgtaatgattgaattgtctgactcaaaagatatacatgtagatgctgaagctttttttcgtatgatgaacctgagattgctcagaatcacttaccccccatatgtgaaccctttaattgagatcagaaaaatttttgaaggggaattatggccggagcggatatacggttacctaccaaatttcgacggcaaattacacttgaatggggacctaaagtttctttctcataagttgagggttctcgcttggcatggttgccccgtaaaaactttgccgtccaacttttacccaaagtgtcttgttgaccttgacatgcgtcatagccacatcgaacagctttggcaagaacccaaggctgcgaaagaattgataagcatcaatttaagttcctgtaaaaatcttaaggaaatccccctctgcactgatgcgccgaaggttcagaaactaattcttaactattgtacaagtttagtggaggtttccccatccatttcagctcttacaggccttgttttcttgagtttacatggttgcactgaacttaagagtcttccaagcaacattcatatgatgaaatttctcaagacccttgttctttccggctgctcaaatcttgagatgtttcccgagatttcagaagatatggaggcactatcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR

Protein Analysis

646

Amino Acids

73.05

Weight (kDa)

6.23

Isoelectric Point (pI)

47.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 152
Acc65I GGTACC 1 cut(s) 75
AccB1I GGYRCC 1 cut(s) 75
AccBSI CCGCTC 1 cut(s) 1438
AciI CCGC 4 cut(s) 51, 312, 357, 1438
AclI AACGTT 1 cut(s) 640
AclWI GGATC 2 cut(s) 248, 728
AcoI YGGCCR 1 cut(s) 1430
AcsI RAATTY 4 cut(s) 570, 1410, 1459, 1856
AcuI CTGAAG 3 cut(s) 436, 754, 1347
AdeI CACNNNGTG 2 cut(s) 949, 958
AfaI GTAC 8 cut(s) 43, 47, 77, 471, 693, 797, 992, 1744
AfiI CCNNNNNNNGG 4 cut(s) 16, 180, 381, 604
AflII CTTAAG 2 cut(s) 1682, 1823
AflIII ACRYGT 1 cut(s) 1315
AgeI ACCGGT 1 cut(s) 173
AgsI TTSAA 8 cut(s) 485, 749, 757, 1030, 1277, 1292, 1418, 1483
AjiI CACGTC 1 cut(s) 815
AjnI CCWGG 2 cut(s) 380, 857
AjuI GAANNNNNNNTTGG 6 cut(s) 625, 630, 657, 662, 890, 922
AluBI AGCT 7 cut(s) 866, 972, 1118, 1147, 1331, 1618, 1778
AluI AGCT 7 cut(s) 866, 972, 1118, 1147, 1331, 1618, 1778
Alw21I GWGCWC 4 cut(s) 868, 954, 1120, 1149
Alw26I GTCTC 1 cut(s) 30
Alw44I GTGCAC 1 cut(s) 950
AlwI GGATC 2 cut(s) 248, 728
Ama87I CYCGRG 2 cut(s) 1148, 1907
AoxI GGCC 2 cut(s) 1430, 1786
ApaLI GTGCAC 1 cut(s) 950
ApeKI GCWGC 3 cut(s) 314, 1637, 1884
ApoI RAATTY 4 cut(s) 570, 1410, 1459, 1856
AsiGI ACCGGT 1 cut(s) 173
Asp700I GAANNNNTTC 3 cut(s) 767, 1059, 1236
Asp718I GGTACC 1 cut(s) 75
AspLEI GCGC 2 cut(s) 319, 1711
AspS9I GGNCC 1 cut(s) 1489
AsuHPI GGTGA 3 cut(s) 410, 935, 1154
AvaI CYCGRG 2 cut(s) 1148, 1907
AvaII GGWCC 1 cut(s) 1489
BaeGI GKGCMC 1 cut(s) 954
BanI GGYRCC 1 cut(s) 75
BanII GRGCYC 3 cut(s) 868, 1120, 1149
BbsI GAAGAC 1 cut(s) 1823
Bbv12I GWGCWC 4 cut(s) 868, 954, 1120, 1149
BbvI GCAGC 3 cut(s) 301, 1624, 1871
BccI CCATC 4 cut(s) 521, 895, 971, 1774
BceAI ACGGC 2 cut(s) 1483, 1540
BcgI CGANNNNNNTGC 2 cut(s) 150, 184
BciT130I CCWGG 2 cut(s) 382, 859
BciVI GTATCC 2 cut(s) 604, 1237
BclI TGATCA 2 cut(s) 144, 415
BcoDI GTCTC 1 cut(s) 30
BfaI CTAG 8 cut(s) 11, 557, 575, 678, 695, 935, 983, 1010
BfmI CTRYAG 1 cut(s) 1166
BfrI CTTAAG 2 cut(s) 1682, 1823
BfuAI ACCTGC 1 cut(s) 152
BfuI GTATCC 2 cut(s) 604, 1237
BisI GCNGC 4 cut(s) 315, 358, 1638, 1885
BlsI GCNGC 4 cut(s) 316, 359, 1639, 1886
BmcAI AGTACT 1 cut(s) 693
Bme1390I CCNGG 2 cut(s) 382, 859
Bme18I GGWCC 1 cut(s) 1489
BmeT110I CYCGRG 2 cut(s) 1148, 1907
BmgBI CACGTC 1 cut(s) 815
BmgT120I GGNCC 1 cut(s) 1489
BmiI GGNNCC 2 cut(s) 77, 1490
BmrFI CCNGG 2 cut(s) 382, 859
BmsI GCATC 6 cut(s) 178, 298, 604, 1312, 1665, 1696
BoxI GACNNNNGTC 2 cut(s) 882, 1596
BpiI GAAGAC 1 cut(s) 1823
BpuEI CTTGAG 5 cut(s) 793, 1117, 1819, 1847, 1916
BsaAI YACGTR 2 cut(s) 45, 251
BsaBI GATNNNNATC 2 cut(s) 282, 1655
BsaI GGTCTC 1 cut(s) 30
BsaJI CCNNGG 5 cut(s) 381, 603, 858, 1202, 1632
BsaWI WCCGGW 1 cut(s) 173
Bsc4I CCNNNNNNNGG 4 cut(s) 16, 180, 381, 604
Bse118I RCCGGY 1 cut(s) 173
Bse1I ACTGG 1 cut(s) 21
Bse3DI GCAATG 2 cut(s) 279, 375
Bse8I GATNNNNATC 2 cut(s) 282, 1655
BseBI CCWGG 2 cut(s) 382, 859
BseDI CCNNGG 5 cut(s) 381, 603, 858, 1202, 1632
BseGI GGATG 3 cut(s) 147, 190, 1766
BseJI GATNNNNATC 2 cut(s) 282, 1655
BseLI CCNNNNNNNGG 4 cut(s) 16, 180, 381, 604
BseMI GCAATG 2 cut(s) 279, 375
BseMII CTCAG 3 cut(s) 801, 1343, 1375
BseNI ACTGG 1 cut(s) 21
BseSI GKGCMC 1 cut(s) 954
BseXI GCAGC 3 cut(s) 301, 1624, 1871
BseYI CCCAGC 1 cut(s) 151
BsgI GTGCAG 1 cut(s) 1684
Bsh1285I CGRYCG 1 cut(s) 174
BshFI GGCC 2 cut(s) 1432, 1788
BshNI GGYRCC 1 cut(s) 75
BshTI ACCGGT 1 cut(s) 173
BsiEI CGRYCG 1 cut(s) 174
BsiHKAI GWGCWC 4 cut(s) 868, 954, 1120, 1149
BsiHKCI CYCGRG 2 cut(s) 1148, 1907
BsiSI CCGG 4 cut(s) 83, 174, 1433, 1881
BsiWI CGTACG 1 cut(s) 41
BslFI GGGAC 2 cut(s) 312, 1502
BslI CCNNNNNNNGG 4 cut(s) 16, 180, 381, 604
BsmAI GTCTC 1 cut(s) 30
BsmFI GGGAC 2 cut(s) 312, 1502
BsmI GAATGC 2 cut(s) 769, 1041
BsnI GGCC 2 cut(s) 1432, 1788
Bso31I GGTCTC 1 cut(s) 30
BsoBI CYCGRG 2 cut(s) 1148, 1907
Bsp1286I GDGCHC 4 cut(s) 868, 954, 1120, 1149
Bsp1407I TGTACA 1 cut(s) 1742
Bsp143I GATC 6 cut(s) 60, 144, 240, 415, 733, 1401
BspACI CCGC 4 cut(s) 51, 312, 357, 1438
BspANI GGCC 2 cut(s) 1432, 1788
BspCNI CTCAG 3 cut(s) 800, 1344, 1374
BspLI GGNNCC 2 cut(s) 77, 1490
BspMI ACCTGC 1 cut(s) 152
BspPI GGATC 2 cut(s) 248, 728
BspT107I GGYRCC 1 cut(s) 75
BspTI CTTAAG 2 cut(s) 1682, 1823
BspTNI GGTCTC 1 cut(s) 30
BsrBI CCGCTC 1 cut(s) 1438
BsrDI GCAATG 2 cut(s) 279, 375
BsrFI RCCGGY 1 cut(s) 173
BsrGI TGTACA 1 cut(s) 1742
BsrI ACTGG 1 cut(s) 21
BssAI RCCGGY 1 cut(s) 173
BssECI CCNNGG 5 cut(s) 381, 603, 858, 1202, 1632
BssMI GATC 6 cut(s) 60, 144, 240, 415, 733, 1401
BssT1I CCWWGG 3 cut(s) 603, 1202, 1632
Bst2UI CCWGG 2 cut(s) 382, 859
Bst4CI ACNGT 8 cut(s) 41, 75, 422, 464, 521, 836, 1070, 1448
Bst6I CTCTTC 2 cut(s) 758, 786
BstAFI CTTAAG 2 cut(s) 1682, 1823
BstAPI GCANNNNNTGC 1 cut(s) 958
BstAUI TGTACA 1 cut(s) 1742
BstBAI YACGTR 2 cut(s) 45, 251
BstC8I GCNNGC 1 cut(s) 1087
BstDEI CTNAG 5 cut(s) 787, 962, 1352, 1361, 1938
BstEII GGTNACC 1 cut(s) 1448
BstF5I GGATG 3 cut(s) 147, 190, 1766
BstHHI GCGC 2 cut(s) 319, 1711
BstKTI GATC 6 cut(s) 63, 147, 243, 418, 736, 1404
BstMAI GTCTC 1 cut(s) 30
BstMBI GATC 6 cut(s) 60, 144, 240, 415, 733, 1401
BstMCI CGRYCG 1 cut(s) 174
BstMWI GCNNNNNNNGC 1 cut(s) 958
BstNI CCWGG 2 cut(s) 382, 859
BstNSI RCATGY 3 cut(s) 1023, 1319, 1597
BstPAI GACNNNNGTC 2 cut(s) 882, 1596
BstPI GGTNACC 1 cut(s) 1448
BstSCI CCNGG 2 cut(s) 380, 857
BstSFI CTRYAG 1 cut(s) 1166
BstSLI GKGCMC 1 cut(s) 954
BstSNI TACGTA 1 cut(s) 45
BstV1I GCAGC 3 cut(s) 301, 1624, 1871
BstV2I GAAGAC 1 cut(s) 1823
BstX2I RGATCY 1 cut(s) 240
BstXI CCANNNNNNTGG 1 cut(s) 894
BstYI RGATCY 1 cut(s) 240
BsuI GTATCC 2 cut(s) 604, 1237
BsuRI GGCC 2 cut(s) 1432, 1788
BtrI CACGTC 1 cut(s) 815
BtsCI GGATG 3 cut(s) 147, 190, 1766
BtsI GCAGTG 1 cut(s) 1096
BtsIMutI CAGTG 3 cut(s) 1096, 1701, 1815
BveI ACCTGC 1 cut(s) 152
Cac8I GCNNGC 1 cut(s) 1087
CfoI GCGC 2 cut(s) 319, 1711
Cfr10I RCCGGY 1 cut(s) 173
Cfr13I GGNCC 1 cut(s) 1489
CseI GACGC 2 cut(s) 749, 1586
Csp6I GTAC 8 cut(s) 42, 46, 76, 470, 692, 796, 991, 1743
CspAI ACCGGT 1 cut(s) 173
CspCI CAANNNNNGTGG 2 cut(s) 1734, 1769
CviAII CATG 9 cut(s) 538, 947, 956, 1020, 1157, 1316, 1532, 1594, 1808
CviQI GTAC 8 cut(s) 42, 46, 76, 470, 692, 796, 991, 1743
DdeI CTNAG 5 cut(s) 787, 962, 1352, 1361, 1938
DpnI GATC 6 cut(s) 62, 146, 242, 417, 735, 1403
DpnII GATC 6 cut(s) 60, 144, 240, 415, 733, 1401
DraIII CACNNNGTG 2 cut(s) 949, 958
EaeI YGGCCR 1 cut(s) 1430
Eam1104I CTCTTC 2 cut(s) 758, 786
EarI CTCTTC 2 cut(s) 758, 786
EciI GGCGGA 1 cut(s) 40
Ecl136II GAGCTC 3 cut(s) 866, 1118, 1147
Eco105I TACGTA 1 cut(s) 45
Eco130I CCWWGG 3 cut(s) 603, 1202, 1632
Eco147I AGGCCT 1 cut(s) 1788
Eco24I GRGCYC 3 cut(s) 868, 1120, 1149
Eco31I GGTCTC 1 cut(s) 30
Eco32I GATATC 1 cut(s) 1015
Eco47I GGWCC 1 cut(s) 1489
Eco53kI GAGCTC 3 cut(s) 866, 1118, 1147
Eco57I CTGAAG 3 cut(s) 436, 754, 1347
Eco88I CYCGRG 2 cut(s) 1148, 1907
Eco91I GGTNACC 1 cut(s) 1448
EcoICRI GAGCTC 3 cut(s) 866, 1118, 1147
EcoO109I RGGNCCY 1 cut(s) 1489
EcoO65I GGTNACC 1 cut(s) 1448
EcoRII CCWGG 2 cut(s) 380, 857
EcoRV GATATC 1 cut(s) 1015
EcoT14I CCWWGG 3 cut(s) 603, 1202, 1632
EcoT38I GRGCYC 3 cut(s) 868, 1120, 1149
ErhI CCWWGG 3 cut(s) 603, 1202, 1632
FaeI CATG 9 cut(s) 541, 950, 959, 1023, 1160, 1319, 1535, 1597, 1811
FaqI GGGAC 2 cut(s) 312, 1502
FatI CATG 9 cut(s) 537, 946, 955, 1019, 1156, 1315, 1531, 1593, 1807
FauNDI CATATG 2 cut(s) 1381, 1848
FbaI TGATCA 2 cut(s) 144, 415
Fnu4HI GCNGC 4 cut(s) 315, 358, 1638, 1885
FokI GGATG 3 cut(s) 134, 197, 1753
FriOI GRGCYC 3 cut(s) 868, 1120, 1149
Fsp4HI GCNGC 4 cut(s) 315, 358, 1638, 1885
FspBI CTAG 8 cut(s) 11, 557, 575, 678, 695, 935, 983, 1010
GlaI GCGC 2 cut(s) 318, 1710
GluI GCNGC 4 cut(s) 315, 358, 1638, 1885
GsaI CCCAGC 1 cut(s) 155
HaeIII GGCC 2 cut(s) 1432, 1788
HapII CCGG 4 cut(s) 83, 174, 1433, 1881
HgaI GACGC 2 cut(s) 749, 1586
HhaI GCGC 2 cut(s) 319, 1711
Hin1II CATG 9 cut(s) 541, 950, 959, 1023, 1160, 1319, 1535, 1597, 1811
Hin6I GCGC 2 cut(s) 317, 1709
HinP1I GCGC 2 cut(s) 317, 1709
HincII GTYRAC 2 cut(s) 517, 1585
HindII GTYRAC 2 cut(s) 517, 1585
HindIII AAGCTT 2 cut(s) 970, 1329
HinfI GANTC 6 cut(s) 278, 342, 498, 1301, 1365, 1828
HpaII CCGG 4 cut(s) 83, 174, 1433, 1881
HphI GGTGA 3 cut(s) 410, 935, 1154
Hpy166II GTNNAC 6 cut(s) 517, 644, 952, 1387, 1585, 1805
Hpy8I GTNNAC 6 cut(s) 517, 644, 952, 1387, 1585, 1805
Hpy99I CGWCG 4 cut(s) 61, 137, 590, 1469
HpyAV CCTTC 8 cut(s) 35, 40, 89, 440, 778, 1271, 1412, 1708
HpyCH4III ACNGT 8 cut(s) 41, 75, 422, 464, 521, 836, 1070, 1448
HpyCH4IV ACGT 5 cut(s) 44, 250, 640, 798, 814
HpyCH4V TGCA 9 cut(s) 272, 289, 478, 818, 952, 1039, 1194, 1701, 1815
HpyF10VI GCNNNNNNNGC 1 cut(s) 958
HpyF3I CTNAG 5 cut(s) 787, 962, 1352, 1361, 1938
HpySE526I ACGT 5 cut(s) 44, 250, 640, 798, 814
Hsp92II CATG 9 cut(s) 541, 950, 959, 1023, 1160, 1319, 1535, 1597, 1811
HspAI GCGC 2 cut(s) 317, 1709
KpnI GGTACC 1 cut(s) 79
Ksp22I TGATCA 2 cut(s) 144, 415
Kzo9I GATC 6 cut(s) 60, 144, 240, 415, 733, 1401
LmnI GCTCC 2 cut(s) 863, 1435
Lsp1109I GCAGC 3 cut(s) 301, 1624, 1871
LweI GCATC 6 cut(s) 178, 298, 604, 1312, 1665, 1696
MaeI CTAG 8 cut(s) 11, 557, 575, 678, 695, 935, 983, 1010
MaeII ACGT 5 cut(s) 44, 250, 640, 798, 814
MaeIII GTNAC 5 cut(s) 458, 533, 670, 875, 1448
MalI GATC 6 cut(s) 62, 146, 242, 417, 735, 1403
MbiI CCGCTC 1 cut(s) 1438
MboI GATC 6 cut(s) 60, 144, 240, 415, 733, 1401
MboII GAAGA 8 cut(s) 159, 745, 803, 863, 978, 1244, 1823, 1931
MflI RGATCY 1 cut(s) 240
MhlI GDGCHC 4 cut(s) 868, 954, 1120, 1149
MlyI GAGTC 2 cut(s) 1295, 1837
MmeI TCCRAC 5 cut(s) 319, 528, 542, 888, 1584
MnlI CCTC 9 cut(s) 64, 206, 250, 435, 796, 1509, 1706, 1750, 1921
MroXI GAANNNNTTC 3 cut(s) 767, 1059, 1236
MslI CAYNNNNRTG 6 cut(s) 542, 873, 892, 1320, 1482, 1847
MspA1I CMGCKG 1 cut(s) 314
MspCI CTTAAG 2 cut(s) 1682, 1823
MspI CCGG 4 cut(s) 83, 174, 1433, 1881
MspR9I CCNGG 2 cut(s) 382, 859
Mva1269I GAATGC 2 cut(s) 769, 1041
MvaI CCWGG 2 cut(s) 382, 859
MwoI GCNNNNNNNGC 1 cut(s) 958
NdeI CATATG 2 cut(s) 1381, 1848
NdeII GATC 6 cut(s) 60, 144, 240, 415, 733, 1401
NlaIII CATG 9 cut(s) 541, 950, 959, 1023, 1160, 1319, 1535, 1597, 1811
NlaIV GGNNCC 2 cut(s) 77, 1490
NmeAIII GCCGAG 1 cut(s) 92
NmuCI GTSAC 1 cut(s) 875
NspI RCATGY 3 cut(s) 1023, 1319, 1597
PaeR7I CTCGAG 1 cut(s) 1148
PceI AGGCCT 1 cut(s) 1788
PciI ACATGT 1 cut(s) 1315
PctI GAATGC 2 cut(s) 769, 1041
PdmI GAANNNNTTC 3 cut(s) 767, 1059, 1236
PfeI GAWTC 4 cut(s) 278, 342, 498, 1365
Pfl23II CGTACG 1 cut(s) 41
PinAI ACCGGT 1 cut(s) 173
PkrI GCNGC 4 cut(s) 316, 359, 1639, 1886
PleI GAGTC 2 cut(s) 1295, 1836
PpsI GAGTC 2 cut(s) 1295, 1836
Ppu21I YACGTR 2 cut(s) 45, 251
PpuMI RGGWCCY 1 cut(s) 1489
PscI ACATGT 1 cut(s) 1315
PshAI GACNNNNGTC 2 cut(s) 882, 1596
Psp124BI GAGCTC 3 cut(s) 868, 1120, 1149
Psp1406I AACGTT 1 cut(s) 640
Psp5II RGGWCCY 1 cut(s) 1489
Psp6I CCWGG 2 cut(s) 380, 857
PspEI GGTNACC 1 cut(s) 1448
PspFI CCCAGC 1 cut(s) 151
PspGI CCWGG 2 cut(s) 380, 857
PspLI CGTACG 1 cut(s) 41
PspN4I GGNNCC 2 cut(s) 77, 1490
PspPI GGNCC 1 cut(s) 1489
PspPPI RGGWCCY 1 cut(s) 1489
PsuI RGATCY 1 cut(s) 240
RsaI GTAC 8 cut(s) 43, 47, 77, 471, 693, 797, 992, 1744
RsaNI GTAC 8 cut(s) 42, 46, 76, 470, 692, 796, 991, 1743
RseI CAYNNNNRTG 6 cut(s) 542, 873, 892, 1320, 1482, 1847
SacI GAGCTC 3 cut(s) 868, 1120, 1149
SatI GCNGC 4 cut(s) 315, 358, 1638, 1885
Sau3AI GATC 6 cut(s) 60, 144, 240, 415, 733, 1401
Sau96I GGNCC 1 cut(s) 1489
ScaI AGTACT 1 cut(s) 693
SchI GAGTC 2 cut(s) 1295, 1837
ScrFI CCNGG 2 cut(s) 382, 859
SduI GDGCHC 4 cut(s) 868, 954, 1120, 1149
SfaNI GCATC 6 cut(s) 178, 298, 604, 1312, 1665, 1696
SfcI CTRYAG 1 cut(s) 1166
Sfr274I CTCGAG 1 cut(s) 1148
SinI GGWCC 1 cut(s) 1489
SlaI CTCGAG 1 cut(s) 1148
SmiMI CAYNNNNRTG 6 cut(s) 542, 873, 892, 1320, 1482, 1847
SmlI CTYRAG 8 cut(s) 808, 1132, 1148, 1682, 1798, 1823, 1862, 1895
SmoI CTYRAG 8 cut(s) 808, 1132, 1148, 1682, 1798, 1823, 1862, 1895
SnaBI TACGTA 1 cut(s) 45
SseBI AGGCCT 1 cut(s) 1788
SsiI CCGC 4 cut(s) 51, 312, 357, 1438
SspMI CTAG 8 cut(s) 11, 557, 575, 678, 695, 935, 983, 1010
SstI GAGCTC 3 cut(s) 868, 1120, 1149
StuI AGGCCT 1 cut(s) 1788
StyD4I CCNGG 2 cut(s) 380, 857
StyI CCWWGG 3 cut(s) 603, 1202, 1632
TaaI ACNGT 8 cut(s) 41, 75, 422, 464, 521, 836, 1070, 1448
TaiI ACGT 5 cut(s) 47, 253, 643, 801, 817
TaqI TCGA 7 cut(s) 56, 170, 525, 585, 1149, 1464, 1611
TatI WGTACW 3 cut(s) 469, 691, 1742
TauI GCSGC 1 cut(s) 360
TfiI GAWTC 4 cut(s) 278, 342, 498, 1365
TscAI CASTG 3 cut(s) 1096, 1708, 1822
TseFI GTSAC 1 cut(s) 875
TseI GCWGC 3 cut(s) 314, 1637, 1884
Tsp45I GTSAC 1 cut(s) 875
TspDTI ATGAA 6 cut(s) 699, 791, 1245, 1361, 1835, 1868
TspRI CASTG 3 cut(s) 1096, 1708, 1822
Vha464I CTTAAG 2 cut(s) 1682, 1823
VneI GTGCAC 1 cut(s) 950
VpaK11BI GGWCC 1 cut(s) 1489
XapI RAATTY 4 cut(s) 570, 1410, 1459, 1856
XbaI TCTAGA 1 cut(s) 1009
XceI RCATGY 3 cut(s) 1023, 1319, 1597
XhoI CTCGAG 1 cut(s) 1148
XmnI GAANNNNTTC 3 cut(s) 767, 1059, 1236
XspI CTAG 8 cut(s) 11, 557, 575, 678, 695, 935, 983, 1010
ZrmI AGTACT 1 cut(s) 693
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.