TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 971, 1548 |
| Acc16I | TGCGCA | 1 cut(s) | 1131 |
| AccB1I | GGYRCC | 1 cut(s) | 307 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 274, 304 |
| AccI | GTMKAC | 3 cut(s) | 402, 1497, 1632 |
| AccII | CGCG | 1 cut(s) | 1738 |
| AccIII | TCCGGA | 1 cut(s) | 23 |
| AciI | CCGC | 3 cut(s) | 292, 390, 1736 |
| AclI | AACGTT | 1 cut(s) | 1590 |
| AclWI | GGATC | 3 cut(s) | 323, 529, 825 |
| AcoI | YGGCCR | 1 cut(s) | 1733 |
| AcsI | RAATTY | 2 cut(s) | 801, 876 |
| AcuI | CTGAAG | 2 cut(s) | 827, 1533 |
| AdeI | CACNNNGTG | 1 cut(s) | 551 |
| AfaI | GTAC | 6 cut(s) | 774, 1000, 1191, 1450, 1764, 1933 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 274, 304, 947, 1397 |
| AflII | CTTAAG | 2 cut(s) | 350, 1835 |
| AflIII | ACRYGT | 3 cut(s) | 74, 1001, 1884 |
| AjiI | CACGTC | 1 cut(s) | 1239 |
| AjnI | CCWGG | 1 cut(s) | 1158 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 912, 944 |
| AleI | CACNNNNGTG | 1 cut(s) | 79 |
| Alw21I | GWGCWC | 1 cut(s) | 1732 |
| Alw26I | GTCTC | 4 cut(s) | 931, 1245, 1660, 1698 |
| Alw44I | GTGCAC | 1 cut(s) | 1728 |
| AlwI | GGATC | 3 cut(s) | 323, 529, 825 |
| Ama87I | CYCGRG | 2 cut(s) | 199, 1391 |
| Aor13HI | TCCGGA | 1 cut(s) | 23 |
| AoxI | GGCC | 1 cut(s) | 1733 |
| ApaLI | GTGCAC | 1 cut(s) | 1728 |
| ApeKI | GCWGC | 3 cut(s) | 5, 8, 504 |
| ApoI | RAATTY | 2 cut(s) | 801, 876 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1337, 1369 |
| AseI | ATTAAT | 1 cut(s) | 1967 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 361, 577, 789 |
| AspLEI | GCGC | 1 cut(s) | 1132 |
| AspS9I | GGNCC | 1 cut(s) | 265 |
| AsuHPI | GGTGA | 1 cut(s) | 537 |
| AvaI | CYCGRG | 2 cut(s) | 199, 1391 |
| AvaII | GGWCC | 1 cut(s) | 265 |
| BaeGI | GKGCMC | 2 cut(s) | 312, 1732 |
| BanI | GGYRCC | 1 cut(s) | 307 |
| BanII | GRGCYC | 1 cut(s) | 1020 |
| BbsI | GAAGAC | 3 cut(s) | 75, 522, 1130 |
| Bbv12I | GWGCWC | 1 cut(s) | 1732 |
| BbvI | GCAGC | 1 cut(s) | 516 |
| BccI | CCATC | 3 cut(s) | 102, 554, 827 |
| BceAI | ACGGC | 2 cut(s) | 1596, 1748 |
| BciT130I | CCWGG | 1 cut(s) | 1160 |
| BcoDI | GTCTC | 4 cut(s) | 931, 1245, 1660, 1698 |
| BfaI | CTAG | 5 cut(s) | 681, 863, 978, 1316, 1607 |
| BfmI | CTRYAG | 2 cut(s) | 1454, 1891 |
| BfrI | CTTAAG | 2 cut(s) | 350, 1835 |
| BglII | AGATCT | 3 cut(s) | 270, 1421, 1516 |
| BisI | GCNGC | 4 cut(s) | 6, 9, 505, 1736 |
| BlsI | GCNGC | 4 cut(s) | 7, 10, 506, 1737 |
| Bme1390I | CCNGG | 1 cut(s) | 1160 |
| Bme18I | GGWCC | 1 cut(s) | 265 |
| BmeT110I | CYCGRG | 2 cut(s) | 199, 1391 |
| BmgBI | CACGTC | 1 cut(s) | 1239 |
| BmgT120I | GGNCC | 1 cut(s) | 265 |
| BmiI | GGNNCC | 4 cut(s) | 296, 309, 394, 1921 |
| BmrFI | CCNGG | 1 cut(s) | 1160 |
| BmrI | ACTGGG | 1 cut(s) | 1004 |
| BmsI | GCATC | 4 cut(s) | 245, 669, 1090, 1449 |
| BmuI | ACTGGG | 1 cut(s) | 1004 |
| BpiI | GAAGAC | 3 cut(s) | 75, 522, 1130 |
| BpmI | CTGGAG | 1 cut(s) | 1664 |
| BpuEI | CTTGAG | 2 cut(s) | 752, 1093 |
| BsaAI | YACGTR | 2 cut(s) | 77, 1636 |
| BsaBI | GATNNNNATC | 2 cut(s) | 539, 1296 |
| BsaI | GGTCTC | 1 cut(s) | 931 |
| BsaJI | CCNNGG | 2 cut(s) | 1159, 1923 |
| BsaWI | WCCGGW | 1 cut(s) | 23 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 274, 304, 947, 1397 |
| Bse118I | RCCGGY | 1 cut(s) | 1059 |
| Bse1I | ACTGG | 3 cut(s) | 129, 267, 999 |
| Bse8I | GATNNNNATC | 2 cut(s) | 539, 1296 |
| BseAI | TCCGGA | 1 cut(s) | 23 |
| BseBI | CCWGG | 1 cut(s) | 1160 |
| BseDI | CCNNGG | 2 cut(s) | 1159, 1923 |
| BseGI | GGATG | 3 cut(s) | 490, 628, 838 |
| BseJI | GATNNNNATC | 2 cut(s) | 539, 1296 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 274, 304, 947, 1397 |
| BseNI | ACTGG | 3 cut(s) | 129, 267, 999 |
| BseRI | GAGGAG | 1 cut(s) | 1678 |
| BseSI | GKGCMC | 2 cut(s) | 312, 1732 |
| BseX3I | CGGCCG | 1 cut(s) | 1733 |
| BseXI | GCAGC | 1 cut(s) | 516 |
| BseYI | CCCAGC | 2 cut(s) | 462, 492 |
| BsgI | GTGCAG | 2 cut(s) | 789, 893 |
| Bsh1236I | CGCG | 1 cut(s) | 1738 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1736 |
| BshFI | GGCC | 1 cut(s) | 1735 |
| BshNI | GGYRCC | 1 cut(s) | 307 |
| BsiEI | CGRYCG | 1 cut(s) | 1736 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1732 |
| BsiHKCI | CYCGRG | 2 cut(s) | 199, 1391 |
| BsiSI | CCGG | 2 cut(s) | 24, 1060 |
| BslFI | GGGAC | 2 cut(s) | 1214, 1502 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 274, 304, 947, 1397 |
| BsmAI | GTCTC | 4 cut(s) | 931, 1245, 1660, 1698 |
| BsmBI | CGTCTC | 1 cut(s) | 1245 |
| BsmFI | GGGAC | 2 cut(s) | 1214, 1502 |
| BsmI | GAATGC | 1 cut(s) | 1530 |
| BsnI | GGCC | 1 cut(s) | 1735 |
| Bso31I | GGTCTC | 1 cut(s) | 931 |
| BsoBI | CYCGRG | 2 cut(s) | 199, 1391 |
| Bsp1286I | GDGCHC | 3 cut(s) | 312, 1020, 1732 |
| Bsp13I | TCCGGA | 1 cut(s) | 23 |
| Bsp1407I | TGTACA | 3 cut(s) | 1189, 1762, 1931 |
| Bsp143I | GATC | 6 cut(s) | 270, 328, 534, 817, 1421, 1516 |
| BspACI | CCGC | 3 cut(s) | 292, 390, 1736 |
| BspANI | GGCC | 1 cut(s) | 1735 |
| BspEI | TCCGGA | 1 cut(s) | 23 |
| BspFNI | CGCG | 1 cut(s) | 1738 |
| BspHI | TCATGA | 1 cut(s) | 1770 |
| BspLI | GGNNCC | 4 cut(s) | 296, 309, 394, 1921 |
| BspPI | GGATC | 3 cut(s) | 323, 529, 825 |
| BspQI | GCTCTTC | 1 cut(s) | 141 |
| BspT107I | GGYRCC | 1 cut(s) | 307 |
| BspTI | CTTAAG | 2 cut(s) | 350, 1835 |
| BspTNI | GGTCTC | 1 cut(s) | 931 |
| BsrFI | RCCGGY | 1 cut(s) | 1059 |
| BsrGI | TGTACA | 3 cut(s) | 1189, 1762, 1931 |
| BsrI | ACTGG | 3 cut(s) | 129, 267, 999 |
| BssAI | RCCGGY | 1 cut(s) | 1059 |
| BssECI | CCNNGG | 2 cut(s) | 1159, 1923 |
| BssMI | GATC | 6 cut(s) | 270, 328, 534, 817, 1421, 1516 |
| BssNAI | GTATAC | 1 cut(s) | 1633 |
| BssT1I | CCWWGG | 1 cut(s) | 1923 |
| Bst1107I | GTATAC | 1 cut(s) | 1633 |
| Bst2UI | CCWGG | 1 cut(s) | 1160 |
| Bst4CI | ACNGT | 3 cut(s) | 612, 1189, 1408 |
| Bst6I | CTCTTC | 2 cut(s) | 141, 405 |
| BstAFI | CTTAAG | 2 cut(s) | 350, 1835 |
| BstAUI | TGTACA | 3 cut(s) | 1189, 1762, 1931 |
| BstBAI | YACGTR | 2 cut(s) | 77, 1636 |
| BstC8I | GCNNGC | 2 cut(s) | 1116, 1276 |
| BstDEI | CTNAG | 2 cut(s) | 152, 1670 |
| BstF5I | GGATG | 3 cut(s) | 490, 628, 838 |
| BstFNI | CGCG | 1 cut(s) | 1738 |
| BstHHI | GCGC | 1 cut(s) | 1132 |
| BstKTI | GATC | 6 cut(s) | 273, 331, 537, 820, 1424, 1519 |
| BstMAI | GTCTC | 4 cut(s) | 931, 1245, 1660, 1698 |
| BstMBI | GATC | 6 cut(s) | 270, 328, 534, 817, 1421, 1516 |
| BstMCI | CGRYCG | 1 cut(s) | 1736 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1681 |
| BstNI | CCWGG | 1 cut(s) | 1160 |
| BstNSI | RCATGY | 4 cut(s) | 589, 1005, 1329, 1888 |
| BstSCI | CCNGG | 1 cut(s) | 1158 |
| BstSFI | CTRYAG | 2 cut(s) | 1454, 1891 |
| BstSLI | GKGCMC | 2 cut(s) | 312, 1732 |
| BstSNI | TACGTA | 1 cut(s) | 1636 |
| BstUI | CGCG | 1 cut(s) | 1738 |
| BstV1I | GCAGC | 1 cut(s) | 516 |
| BstV2I | GAAGAC | 3 cut(s) | 75, 522, 1130 |
| BstX2I | RGATCY | 4 cut(s) | 270, 328, 1421, 1516 |
| BstYI | RGATCY | 4 cut(s) | 270, 328, 1421, 1516 |
| BstZ17I | GTATAC | 1 cut(s) | 1633 |
| BstZI | CGGCCG | 1 cut(s) | 1733 |
| BsuRI | GGCC | 1 cut(s) | 1735 |
| BtrI | CACGTC | 1 cut(s) | 1239 |
| BtsCI | GGATG | 3 cut(s) | 490, 628, 838 |
| BtsIMutI | CAGTG | 1 cut(s) | 122 |
| Cac8I | GCNNGC | 2 cut(s) | 1116, 1276 |
| CciI | TCATGA | 1 cut(s) | 1770 |
| CfoI | GCGC | 1 cut(s) | 1132 |
| Cfr10I | RCCGGY | 1 cut(s) | 1059 |
| Cfr13I | GGNCC | 1 cut(s) | 265 |
| Csp6I | GTAC | 6 cut(s) | 773, 999, 1190, 1449, 1763, 1932 |
| CviQI | GTAC | 6 cut(s) | 773, 999, 1190, 1449, 1763, 1932 |
| DdeI | CTNAG | 2 cut(s) | 152, 1670 |
| DpnI | GATC | 6 cut(s) | 272, 330, 536, 819, 1423, 1518 |
| DpnII | GATC | 6 cut(s) | 270, 328, 534, 817, 1421, 1516 |
| DraIII | CACNNNGTG | 1 cut(s) | 551 |
| EaeI | YGGCCR | 1 cut(s) | 1733 |
| EagI | CGGCCG | 1 cut(s) | 1733 |
| Eam1104I | CTCTTC | 2 cut(s) | 141, 405 |
| EarI | CTCTTC | 2 cut(s) | 141, 405 |
| EciI | GGCGGA | 1 cut(s) | 307 |
| EclXI | CGGCCG | 1 cut(s) | 1733 |
| Eco105I | TACGTA | 1 cut(s) | 1636 |
| Eco130I | CCWWGG | 1 cut(s) | 1923 |
| Eco24I | GRGCYC | 1 cut(s) | 1020 |
| Eco31I | GGTCTC | 1 cut(s) | 931 |
| Eco47I | GGWCC | 1 cut(s) | 265 |
| Eco52I | CGGCCG | 1 cut(s) | 1733 |
| Eco57I | CTGAAG | 2 cut(s) | 827, 1533 |
| Eco88I | CYCGRG | 2 cut(s) | 199, 1391 |
| EcoRII | CCWGG | 1 cut(s) | 1158 |
| EcoT14I | CCWWGG | 1 cut(s) | 1923 |
| EcoT22I | ATGCAT | 3 cut(s) | 238, 591, 1464 |
| EcoT38I | GRGCYC | 1 cut(s) | 1020 |
| ErhI | CCWWGG | 1 cut(s) | 1923 |
| Esp3I | CGTCTC | 1 cut(s) | 1245 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 734, 766, 1029, 1061 |
| FaqI | GGGAC | 2 cut(s) | 1214, 1502 |
| FblI | GTMKAC | 3 cut(s) | 402, 1497, 1632 |
| Fnu4HI | GCNGC | 4 cut(s) | 6, 9, 505, 1736 |
| FokI | GGATG | 3 cut(s) | 497, 635, 845 |
| FriOI | GRGCYC | 1 cut(s) | 1020 |
| Fsp4HI | GCNGC | 4 cut(s) | 6, 9, 505, 1736 |
| FspAI | RTGCGCAY | 1 cut(s) | 1131 |
| FspBI | CTAG | 5 cut(s) | 681, 863, 978, 1316, 1607 |
| FspI | TGCGCA | 1 cut(s) | 1131 |
| GlaI | GCGC | 1 cut(s) | 1131 |
| GluI | GCNGC | 4 cut(s) | 6, 9, 505, 1736 |
| GsaI | CCCAGC | 2 cut(s) | 466, 496 |
| GsuI | CTGGAG | 1 cut(s) | 1664 |
| HaeIII | GGCC | 1 cut(s) | 1735 |
| HapII | CCGG | 2 cut(s) | 24, 1060 |
| HhaI | GCGC | 1 cut(s) | 1132 |
| Hin6I | GCGC | 1 cut(s) | 1130 |
| HinP1I | GCGC | 1 cut(s) | 1130 |
| HincII | GTYRAC | 5 cut(s) | 403, 672, 1029, 1177, 1882 |
| HindII | GTYRAC | 5 cut(s) | 403, 672, 1029, 1177, 1882 |
| HindIII | AAGCTT | 1 cut(s) | 369 |
| HinfI | GANTC | 7 cut(s) | 140, 197, 467, 578, 599, 642, 1827 |
| HpaI | GTTAAC | 1 cut(s) | 1177 |
| HpaII | CCGG | 2 cut(s) | 24, 1060 |
| HphI | GGTGA | 1 cut(s) | 537 |
| Hpy188I | TCNGA | 9 cut(s) | 62, 111, 145, 175, 528, 807, 1073, 1090, 1302 |
| Hpy99I | CGWCG | 2 cut(s) | 47, 167 |
| HpyAV | CCTTC | 6 cut(s) | 142, 736, 802, 1277, 1589, 1910 |
| HpyCH4III | ACNGT | 3 cut(s) | 612, 1189, 1408 |
| HpyCH4IV | ACGT | 6 cut(s) | 45, 76, 1238, 1590, 1635, 1878 |
| HpyCH4V | TGCA | 9 cut(s) | 236, 377, 589, 770, 910, 1325, 1462, 1730, 1942 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1681 |
| HpyF3I | CTNAG | 2 cut(s) | 152, 1670 |
| HpySE526I | ACGT | 6 cut(s) | 45, 76, 1238, 1590, 1635, 1878 |
| HspAI | GCGC | 1 cut(s) | 1130 |
| Kpn2I | TCCGGA | 1 cut(s) | 23 |
| KspAI | GTTAAC | 1 cut(s) | 1177 |
| Kzo9I | GATC | 6 cut(s) | 270, 328, 534, 817, 1421, 1516 |
| LguI | GCTCTTC | 1 cut(s) | 141 |
| LmnI | GCTCC | 4 cut(s) | 175, 294, 957, 1163 |
| Lsp1109I | GCAGC | 1 cut(s) | 516 |
| LweI | GCATC | 4 cut(s) | 245, 669, 1090, 1449 |
| MaeI | CTAG | 5 cut(s) | 681, 863, 978, 1316, 1607 |
| MaeII | ACGT | 6 cut(s) | 45, 76, 1238, 1590, 1635, 1878 |
| MaeIII | GTNAC | 3 cut(s) | 990, 1357, 1429 |
| MalI | GATC | 6 cut(s) | 272, 330, 536, 819, 1423, 1518 |
| MboI | GATC | 6 cut(s) | 270, 328, 534, 817, 1421, 1516 |
| MfeI | CAATTG | 1 cut(s) | 1848 |
| MflI | RGATCY | 4 cut(s) | 270, 328, 1421, 1516 |
| MhlI | GDGCHC | 3 cut(s) | 312, 1020, 1732 |
| MlyI | GAGTC | 1 cut(s) | 191 |
| MmeI | TCCRAC | 3 cut(s) | 396, 619, 1191 |
| MnlI | CCTC | 8 cut(s) | 20, 56, 195, 343, 739, 830, 1621, 1656 |
| Mph1103I | ATGCAT | 3 cut(s) | 238, 591, 1464 |
| MroI | TCCGGA | 1 cut(s) | 23 |
| MroXI | GAANNNNTTC | 3 cut(s) | 361, 577, 789 |
| MseI | TTAA | 8 cut(s) | 254, 351, 437, 1176, 1335, 1805, 1836, 1967 |
| MslI | CAYNNNNRTG | 2 cut(s) | 79, 711 |
| MspCI | CTTAAG | 2 cut(s) | 350, 1835 |
| MspI | CCGG | 2 cut(s) | 24, 1060 |
| MspR9I | CCNGG | 1 cut(s) | 1160 |
| MunI | CAATTG | 1 cut(s) | 1848 |
| Mva1269I | GAATGC | 1 cut(s) | 1530 |
| MvaI | CCWGG | 1 cut(s) | 1160 |
| MvnI | CGCG | 1 cut(s) | 1738 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1681 |
| NdeII | GATC | 6 cut(s) | 270, 328, 534, 817, 1421, 1516 |
| NlaIV | GGNNCC | 4 cut(s) | 296, 309, 394, 1921 |
| NmuCI | GTSAC | 1 cut(s) | 1429 |
| NsbI | TGCGCA | 1 cut(s) | 1131 |
| NsiI | ATGCAT | 3 cut(s) | 238, 591, 1464 |
| NspI | RCATGY | 4 cut(s) | 589, 1005, 1329, 1888 |
| OliI | CACNNNNGTG | 1 cut(s) | 79 |
| PaeR7I | CTCGAG | 1 cut(s) | 199 |
| PagI | TCATGA | 1 cut(s) | 1770 |
| PciI | ACATGT | 2 cut(s) | 1001, 1884 |
| PciSI | GCTCTTC | 1 cut(s) | 141 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 206 |
| PctI | GAATGC | 1 cut(s) | 1530 |
| PdmI | GAANNNNTTC | 3 cut(s) | 361, 577, 789 |
| PfeI | GAWTC | 6 cut(s) | 140, 467, 578, 599, 642, 1827 |
| PflFI | GACNNNGTC | 1 cut(s) | 1493 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 274, 304 |
| PkrI | GCNGC | 4 cut(s) | 7, 10, 506, 1737 |
| PleI | GAGTC | 1 cut(s) | 191 |
| PpsI | GAGTC | 1 cut(s) | 191 |
| Ppu21I | YACGTR | 2 cut(s) | 77, 1636 |
| PscI | ACATGT | 2 cut(s) | 1001, 1884 |
| PshBI | ATTAAT | 1 cut(s) | 1967 |
| PsiI | TTATAA | 2 cut(s) | 971, 1548 |
| Psp1406I | AACGTT | 1 cut(s) | 1590 |
| Psp6I | CCWGG | 1 cut(s) | 1158 |
| PspFI | CCCAGC | 2 cut(s) | 462, 492 |
| PspGI | CCWGG | 1 cut(s) | 1158 |
| PspN4I | GGNNCC | 4 cut(s) | 296, 309, 394, 1921 |
| PspPI | GGNCC | 1 cut(s) | 265 |
| PspXI | VCTCGAGB | 1 cut(s) | 199 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1746, 1778 |
| PsuI | RGATCY | 4 cut(s) | 270, 328, 1421, 1516 |
| PsyI | GACNNNGTC | 1 cut(s) | 1493 |
| RsaI | GTAC | 6 cut(s) | 774, 1000, 1191, 1450, 1764, 1933 |
| RsaNI | GTAC | 6 cut(s) | 773, 999, 1190, 1449, 1763, 1932 |
| RseI | CAYNNNNRTG | 2 cut(s) | 79, 711 |
| SalI | GTCGAC | 1 cut(s) | 401 |
| SapI | GCTCTTC | 1 cut(s) | 141 |
| SaqAI | TTAA | 8 cut(s) | 254, 351, 437, 1176, 1335, 1805, 1836, 1967 |
| SatI | GCNGC | 4 cut(s) | 6, 9, 505, 1736 |
| Sau3AI | GATC | 6 cut(s) | 270, 328, 534, 817, 1421, 1516 |
| Sau96I | GGNCC | 1 cut(s) | 265 |
| SchI | GAGTC | 1 cut(s) | 191 |
| ScrFI | CCNGG | 1 cut(s) | 1160 |
| SduI | GDGCHC | 3 cut(s) | 312, 1020, 1732 |
| SfaNI | GCATC | 4 cut(s) | 245, 669, 1090, 1449 |
| SfcI | CTRYAG | 2 cut(s) | 1454, 1891 |
| Sfr274I | CTCGAG | 1 cut(s) | 199 |
| SinI | GGWCC | 1 cut(s) | 265 |
| SlaI | CTCGAG | 1 cut(s) | 199 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 79, 711 |
| SmlI | CTYRAG | 5 cut(s) | 199, 350, 731, 1108, 1835 |
| SmoI | CTYRAG | 5 cut(s) | 199, 350, 731, 1108, 1835 |
| SnaBI | TACGTA | 1 cut(s) | 1636 |
| SsiI | CCGC | 3 cut(s) | 292, 390, 1736 |
| SspI | AATATT | 3 cut(s) | 1085, 1311, 1694 |
| SspMI | CTAG | 5 cut(s) | 681, 863, 978, 1316, 1607 |
| StyD4I | CCNGG | 1 cut(s) | 1158 |
| StyI | CCWWGG | 1 cut(s) | 1923 |
| TaaI | ACNGT | 3 cut(s) | 612, 1189, 1408 |
| TaiI | ACGT | 6 cut(s) | 48, 79, 1241, 1593, 1638, 1881 |
| TaqI | TCGA | 4 cut(s) | 200, 209, 402, 820 |
| TatI | WGTACW | 4 cut(s) | 772, 1189, 1762, 1931 |
| TauI | GCSGC | 1 cut(s) | 1738 |
| TfiI | GAWTC | 6 cut(s) | 140, 467, 578, 599, 642, 1827 |
| Tru1I | TTAA | 8 cut(s) | 254, 351, 437, 1176, 1335, 1805, 1836, 1967 |
| Tru9I | TTAA | 8 cut(s) | 254, 351, 437, 1176, 1335, 1805, 1836, 1967 |
| TscAI | CASTG | 1 cut(s) | 129 |
| TseFI | GTSAC | 1 cut(s) | 1429 |
| TseI | GCWGC | 3 cut(s) | 5, 8, 504 |
| Tsp45I | GTSAC | 1 cut(s) | 1429 |
| TspRI | CASTG | 1 cut(s) | 129 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1493 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 274, 304 |
| Vha464I | CTTAAG | 2 cut(s) | 350, 1835 |
| VneI | GTGCAC | 1 cut(s) | 1728 |
| VpaK11BI | GGWCC | 1 cut(s) | 265 |
| VspI | ATTAAT | 1 cut(s) | 1967 |
| XapI | RAATTY | 2 cut(s) | 801, 876 |
| XbaI | TCTAGA | 1 cut(s) | 1315 |
| XceI | RCATGY | 4 cut(s) | 589, 1005, 1329, 1888 |
| XhoI | CTCGAG | 1 cut(s) | 199 |
| XmiI | GTMKAC | 3 cut(s) | 402, 1497, 1632 |
| XmnI | GAANNNNTTC | 3 cut(s) | 361, 577, 789 |
| XspI | CTAG | 5 cut(s) | 681, 863, 978, 1316, 1607 |
| Zsp2I | ATGCAT | 3 cut(s) | 238, 591, 1464 |