TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 92 - 240 | 4.6e-16 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 758 |
| AciI | CCGC | 1 cut(s) | 690 |
| AclI | AACGTT | 1 cut(s) | 506 |
| AclWI | GGATC | 1 cut(s) | 404 |
| AcoI | YGGCCR | 1 cut(s) | 580 |
| AcsI | RAATTY | 2 cut(s) | 288, 743 |
| AcuI | CTGAAG | 1 cut(s) | 448 |
| AfaI | GTAC | 2 cut(s) | 433, 640 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 146, 316, 758 |
| AflIII | ACRYGT | 2 cut(s) | 363, 525 |
| AgsI | TTSAA | 4 cut(s) | 265, 304, 439, 748 |
| AjnI | CCWGG | 1 cut(s) | 277 |
| AluBI | AGCT | 7 cut(s) | 41, 70, 113, 187, 340, 462, 468 |
| AluI | AGCT | 7 cut(s) | 41, 70, 113, 187, 340, 462, 468 |
| Alw26I | GTCTC | 2 cut(s) | 276, 360 |
| AlwI | GGATC | 1 cut(s) | 404 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 332 |
| AoxI | GGCC | 3 cut(s) | 580, 603, 761 |
| ApeKI | GCWGC | 1 cut(s) | 187 |
| ApoI | RAATTY | 2 cut(s) | 288, 743 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 659, 691 |
| AspS9I | GGNCC | 2 cut(s) | 576, 761 |
| AsuHPI | GGTGA | 2 cut(s) | 299, 656 |
| AvaII | GGWCC | 1 cut(s) | 576 |
| BbvI | GCAGC | 1 cut(s) | 174 |
| BccI | CCATC | 2 cut(s) | 652, 686 |
| BceAI | ACGGC | 2 cut(s) | 374, 567 |
| BciT130I | CCWGG | 1 cut(s) | 279 |
| BcoDI | GTCTC | 2 cut(s) | 276, 360 |
| BfaI | CTAG | 1 cut(s) | 248 |
| BisI | GCNGC | 1 cut(s) | 188 |
| BlsI | GCNGC | 1 cut(s) | 189 |
| Bme1390I | CCNGG | 1 cut(s) | 279 |
| Bme18I | GGWCC | 1 cut(s) | 576 |
| BmgT120I | GGNCC | 2 cut(s) | 576, 761 |
| BmrFI | CCNGG | 1 cut(s) | 279 |
| BmsI | GCATC | 2 cut(s) | 85, 149 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 340, 372 |
| BpuEI | CTTGAG | 2 cut(s) | 61, 553 |
| BsaBI | GATNNNNATC | 1 cut(s) | 243 |
| BsaJI | CCNNGG | 1 cut(s) | 277 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 146, 316, 758 |
| Bse1I | ACTGG | 2 cut(s) | 560, 673 |
| Bse8I | GATNNNNATC | 1 cut(s) | 243 |
| BseBI | CCWGG | 1 cut(s) | 279 |
| BseDI | CCNNGG | 1 cut(s) | 277 |
| BseGI | GGATG | 5 cut(s) | 156, 164, 287, 326, 496 |
| BseJI | GATNNNNATC | 1 cut(s) | 243 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 146, 316, 758 |
| BseMII | CTCAG | 1 cut(s) | 591 |
| BseNI | ACTGG | 2 cut(s) | 560, 673 |
| BseX3I | CGGCCG | 1 cut(s) | 580 |
| BseXI | GCAGC | 1 cut(s) | 174 |
| BsgI | GTGCAG | 1 cut(s) | 91 |
| Bsh1285I | CGRYCG | 1 cut(s) | 583 |
| BshFI | GGCC | 3 cut(s) | 582, 605, 763 |
| BsiEI | CGRYCG | 1 cut(s) | 583 |
| BsiSI | CCGG | 1 cut(s) | 579 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 146, 316, 758 |
| BsmAI | GTCTC | 2 cut(s) | 276, 360 |
| BsnI | GGCC | 3 cut(s) | 582, 605, 763 |
| Bsp143I | GATC | 4 cut(s) | 232, 409, 510, 520 |
| BspACI | CCGC | 1 cut(s) | 690 |
| BspANI | GGCC | 3 cut(s) | 582, 605, 763 |
| BspCNI | CTCAG | 1 cut(s) | 592 |
| BspHI | TCATGA | 2 cut(s) | 100, 358 |
| BspPI | GGATC | 1 cut(s) | 404 |
| BsrI | ACTGG | 2 cut(s) | 560, 673 |
| BssECI | CCNNGG | 1 cut(s) | 277 |
| BssMI | GATC | 4 cut(s) | 232, 409, 510, 520 |
| Bst2UI | CCWGG | 1 cut(s) | 279 |
| Bst4CI | ACNGT | 2 cut(s) | 124, 214 |
| BstC8I | GCNNGC | 2 cut(s) | 43, 709 |
| BstDEI | CTNAG | 2 cut(s) | 341, 600 |
| BstF5I | GGATG | 5 cut(s) | 156, 164, 287, 326, 496 |
| BstKTI | GATC | 4 cut(s) | 235, 412, 513, 523 |
| BstMAI | GTCTC | 2 cut(s) | 276, 360 |
| BstMBI | GATC | 4 cut(s) | 232, 409, 510, 520 |
| BstMCI | CGRYCG | 1 cut(s) | 583 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 386 |
| BstNI | CCWGG | 1 cut(s) | 279 |
| BstNSI | RCATGY | 2 cut(s) | 367, 529 |
| BstSCI | CCNGG | 1 cut(s) | 277 |
| BstV1I | GCAGC | 1 cut(s) | 174 |
| BstZI | CGGCCG | 1 cut(s) | 580 |
| BsuRI | GGCC | 3 cut(s) | 582, 605, 763 |
| BtsCI | GGATG | 5 cut(s) | 156, 164, 287, 326, 496 |
| BtsI | GCAGTG | 1 cut(s) | 320 |
| BtsIMutI | CAGTG | 5 cut(s) | 219, 320, 333, 567, 597 |
| Cac8I | GCNNGC | 2 cut(s) | 43, 709 |
| CaiI | CAGNNNCTG | 1 cut(s) | 332 |
| CciI | TCATGA | 2 cut(s) | 100, 358 |
| Cfr13I | GGNCC | 2 cut(s) | 576, 761 |
| Csp6I | GTAC | 2 cut(s) | 432, 639 |
| CviAII | CATG | 7 cut(s) | 101, 359, 364, 449, 526, 546, 722 |
| CviQI | GTAC | 2 cut(s) | 432, 639 |
| DdeI | CTNAG | 2 cut(s) | 341, 600 |
| DpnI | GATC | 4 cut(s) | 234, 411, 512, 522 |
| DpnII | GATC | 4 cut(s) | 232, 409, 510, 520 |
| EaeI | YGGCCR | 1 cut(s) | 580 |
| EagI | CGGCCG | 1 cut(s) | 580 |
| EclXI | CGGCCG | 1 cut(s) | 580 |
| Eco47I | GGWCC | 1 cut(s) | 576 |
| Eco52I | CGGCCG | 1 cut(s) | 580 |
| Eco57I | CTGAAG | 1 cut(s) | 448 |
| EcoRII | CCWGG | 1 cut(s) | 277 |
| FaeI | CATG | 7 cut(s) | 104, 362, 367, 452, 529, 549, 725 |
| FatI | CATG | 7 cut(s) | 100, 358, 363, 448, 525, 545, 721 |
| Fnu4HI | GCNGC | 1 cut(s) | 188 |
| FokI | GGATG | 5 cut(s) | 163, 171, 294, 333, 503 |
| Fsp4HI | GCNGC | 1 cut(s) | 188 |
| FspBI | CTAG | 1 cut(s) | 248 |
| GluI | GCNGC | 1 cut(s) | 188 |
| HaeIII | GGCC | 3 cut(s) | 582, 605, 763 |
| HapII | CCGG | 1 cut(s) | 579 |
| Hin1II | CATG | 7 cut(s) | 104, 362, 367, 452, 529, 549, 725 |
| HincII | GTYRAC | 1 cut(s) | 587 |
| HindII | GTYRAC | 1 cut(s) | 587 |
| HindIII | AAGCTT | 1 cut(s) | 39 |
| HinfI | GANTC | 3 cut(s) | 349, 609, 633 |
| HpaII | CCGG | 1 cut(s) | 579 |
| HphI | GGTGA | 2 cut(s) | 299, 656 |
| Hpy166II | GTNNAC | 2 cut(s) | 587, 727 |
| Hpy188III | TCNNGA | 7 cut(s) | 78, 101, 236, 293, 359, 496, 532 |
| Hpy8I | GTNNAC | 2 cut(s) | 587, 727 |
| HpyAV | CCTTC | 2 cut(s) | 433, 740 |
| HpyCH4III | ACNGT | 2 cut(s) | 124, 214 |
| HpyCH4IV | ACGT | 2 cut(s) | 434, 506 |
| HpyCH4V | TGCA | 6 cut(s) | 45, 108, 128, 190, 335, 707 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 386 |
| HpyF3I | CTNAG | 2 cut(s) | 341, 600 |
| HpySE526I | ACGT | 2 cut(s) | 434, 506 |
| Hsp92II | CATG | 7 cut(s) | 104, 362, 367, 452, 529, 549, 725 |
| Kzo9I | GATC | 4 cut(s) | 232, 409, 510, 520 |
| LmnI | GCTCC | 1 cut(s) | 33 |
| Lsp1109I | GCAGC | 1 cut(s) | 174 |
| LweI | GCATC | 2 cut(s) | 85, 149 |
| MaeI | CTAG | 1 cut(s) | 248 |
| MaeII | ACGT | 2 cut(s) | 434, 506 |
| MaeIII | GTNAC | 2 cut(s) | 328, 661 |
| MalI | GATC | 4 cut(s) | 234, 411, 512, 522 |
| MboI | GATC | 4 cut(s) | 232, 409, 510, 520 |
| MfeI | CAATTG | 1 cut(s) | 32 |
| MluCI | AATT | 6 cut(s) | 32, 175, 241, 288, 397, 743 |
| MlyI | GAGTC | 2 cut(s) | 358, 642 |
| MnlI | CCTC | 7 cut(s) | 42, 85, 150, 245, 424, 448, 595 |
| MseI | TTAA | 1 cut(s) | 20 |
| MspA1I | CMGCKG | 1 cut(s) | 187 |
| MspI | CCGG | 1 cut(s) | 579 |
| MspR9I | CCNGG | 1 cut(s) | 279 |
| MunI | CAATTG | 1 cut(s) | 32 |
| MvaI | CCWGG | 1 cut(s) | 279 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 386 |
| NdeII | GATC | 4 cut(s) | 232, 409, 510, 520 |
| NlaIII | CATG | 7 cut(s) | 104, 362, 367, 452, 529, 549, 725 |
| NmuCI | GTSAC | 1 cut(s) | 328 |
| NspI | RCATGY | 2 cut(s) | 367, 529 |
| PagI | TCATGA | 2 cut(s) | 100, 358 |
| PciI | ACATGT | 2 cut(s) | 363, 525 |
| PfeI | GAWTC | 1 cut(s) | 609 |
| PflFI | GACNNNGTC | 1 cut(s) | 348 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 758 |
| PkrI | GCNGC | 1 cut(s) | 189 |
| PleI | GAGTC | 2 cut(s) | 357, 641 |
| PpsI | GAGTC | 2 cut(s) | 357, 641 |
| PscI | ACATGT | 2 cut(s) | 363, 525 |
| Psp1406I | AACGTT | 1 cut(s) | 506 |
| Psp6I | CCWGG | 1 cut(s) | 277 |
| PspGI | CCWGG | 1 cut(s) | 277 |
| PspPI | GGNCC | 2 cut(s) | 576, 761 |
| PstNI | CAGNNNCTG | 1 cut(s) | 332 |
| PsyI | GACNNNGTC | 1 cut(s) | 348 |
| PvuII | CAGCTG | 1 cut(s) | 187 |
| RsaI | GTAC | 2 cut(s) | 433, 640 |
| RsaNI | GTAC | 2 cut(s) | 432, 639 |
| SaqAI | TTAA | 1 cut(s) | 20 |
| SatI | GCNGC | 1 cut(s) | 188 |
| Sau3AI | GATC | 4 cut(s) | 232, 409, 510, 520 |
| Sau96I | GGNCC | 2 cut(s) | 576, 761 |
| SchI | GAGTC | 2 cut(s) | 358, 642 |
| ScrFI | CCNGG | 1 cut(s) | 279 |
| SfaNI | GCATC | 2 cut(s) | 85, 149 |
| SinI | GGWCC | 1 cut(s) | 576 |
| SmlI | CTYRAG | 2 cut(s) | 76, 532 |
| SmoI | CTYRAG | 2 cut(s) | 76, 532 |
| Sse9I | AATT | 6 cut(s) | 32, 175, 241, 288, 397, 743 |
| SsiI | CCGC | 1 cut(s) | 690 |
| SspMI | CTAG | 1 cut(s) | 248 |
| StyD4I | CCNGG | 1 cut(s) | 277 |
| TaaI | ACNGT | 2 cut(s) | 124, 214 |
| TaiI | ACGT | 2 cut(s) | 437, 509 |
| TaqI | TCGA | 3 cut(s) | 480, 513, 612 |
| TasI | AATT | 6 cut(s) | 32, 175, 241, 288, 397, 743 |
| TfiI | GAWTC | 1 cut(s) | 609 |
| Tru1I | TTAA | 1 cut(s) | 20 |
| Tru9I | TTAA | 1 cut(s) | 20 |
| TscAI | CASTG | 5 cut(s) | 219, 320, 333, 567, 604 |
| TseFI | GTSAC | 1 cut(s) | 328 |
| TseI | GCWGC | 1 cut(s) | 187 |
| Tsp45I | GTSAC | 1 cut(s) | 328 |
| TspDTI | ATGAA | 4 cut(s) | 17, 167, 581, 710 |
| TspGWI | ACGGA | 3 cut(s) | 361, 626, 645 |
| TspRI | CASTG | 5 cut(s) | 219, 320, 333, 567, 604 |
| Tth111I | GACNNNGTC | 1 cut(s) | 348 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 758 |
| VpaK11BI | GGWCC | 1 cut(s) | 576 |
| XapI | RAATTY | 2 cut(s) | 288, 743 |
| XceI | RCATGY | 2 cut(s) | 367, 529 |
| XspI | CTAG | 1 cut(s) | 248 |