Conserved oligomeric Golgi complex subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2691 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 167 |
| AatII | GACGTC | 2 cut(s) | 23, 135 |
| Acc36I | ACCTGC | 1 cut(s) | 883 |
| AccB1I | GGYRCC | 1 cut(s) | 181 |
| AccI | GTMKAC | 1 cut(s) | 2905 |
| AccII | CGCG | 5 cut(s) | 112, 120, 451, 1610, 1996 |
| AccIII | TCCGGA | 1 cut(s) | 3199 |
| AciI | CCGC | 9 cut(s) | 45, 80, 118, 357, 451, 1573, 1994, 2071, 2500 |
| AclI | AACGTT | 3 cut(s) | 2090, 2243, 3850 |
| AclWI | GGATC | 4 cut(s) | 2738, 3162, 3191, 3204 |
| AcoI | YGGCCR | 1 cut(s) | 3116 |
| AcsI | RAATTY | 7 cut(s) | 654, 1338, 1630, 1795, 2110, 2786, 3412 |
| AcuI | CTGAAG | 3 cut(s) | 993, 1136, 1686 |
| AcvI | CACGTG | 1 cut(s) | 3724 |
| AcyI | GRCGYC | 4 cut(s) | 20, 132, 162, 363 |
| AfaI | GTAC | 7 cut(s) | 1155, 1171, 2797, 2970, 3061, 3720, 3903 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 178, 808, 1082, 1148, 1821, 2485, 2499, 3074, 3347 |
| AflII | CTTAAG | 2 cut(s) | 1438, 1772 |
| AflIII | ACRYGT | 1 cut(s) | 3721 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1849, 1869 |
| AjnI | CCWGG | 7 cut(s) | 1075, 1316, 1342, 1363, 1541, 2155, 3067 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2410, 2442 |
| Alw21I | GWGCWC | 4 cut(s) | 291, 469, 2290, 3694 |
| Alw26I | GTCTC | 8 cut(s) | 677, 853, 1176, 1856, 1955, 2699, 3235, 3614 |
| Alw44I | GTGCAC | 2 cut(s) | 287, 2286 |
| AlwI | GGATC | 4 cut(s) | 2738, 3162, 3191, 3204 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1391, 2858 |
| Ama87I | CYCGRG | 1 cut(s) | 1519 |
| Aor13HI | TCCGGA | 1 cut(s) | 3199 |
| AoxI | GGCC | 5 cut(s) | 2153, 2269, 2534, 3116, 3140 |
| ApaI | GGGCCC | 1 cut(s) | 2273 |
| ApaLI | GTGCAC | 2 cut(s) | 287, 2286 |
| ApeKI | GCWGC | 9 cut(s) | 122, 391, 601, 1391, 2027, 2164, 3469, 3570, 3599 |
| ApoI | RAATTY | 7 cut(s) | 654, 1338, 1630, 1795, 2110, 2786, 3412 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 86, 118, 150, 182, 437, 469 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1935, 2868 |
| AspLEI | GCGC | 5 cut(s) | 114, 122, 1610, 1612, 2718 |
| AspS9I | GGNCC | 4 cut(s) | 85, 799, 2269, 2270 |
| AsuHPI | GGTGA | 7 cut(s) | 277, 319, 1037, 1226, 1342, 1922, 3362 |
| AsuII | TTCGAA | 1 cut(s) | 2791 |
| AsuNHI | GCTAGC | 2 cut(s) | 1604, 3566 |
| AvaI | CYCGRG | 1 cut(s) | 1519 |
| AvaII | GGWCC | 2 cut(s) | 85, 799 |
| BaeGI | GKGCMC | 4 cut(s) | 291, 2273, 2290, 3841 |
| BamHI | GGATCC | 1 cut(s) | 3196 |
| BanI | GGYRCC | 1 cut(s) | 181 |
| BanII | GRGCYC | 2 cut(s) | 357, 2273 |
| BbrPI | CACGTG | 1 cut(s) | 3724 |
| BbsI | GAAGAC | 4 cut(s) | 165, 239, 1124, 2756 |
| Bbv12I | GWGCWC | 4 cut(s) | 291, 469, 2290, 3694 |
| BbvCI | CCTCAGC | 1 cut(s) | 2670 |
| BbvI | GCAGC | 9 cut(s) | 134, 378, 588, 1378, 2014, 2151, 3481, 3557, 3586 |
| BceAI | ACGGC | 5 cut(s) | 44, 53, 149, 1548, 3672 |
| BcgI | CGANNNNNNTGC | 3 cut(s) | 37, 310, 344 |
| BciT130I | CCWGG | 7 cut(s) | 1077, 1318, 1344, 1365, 1543, 2157, 3069 |
| BclI | TGATCA | 1 cut(s) | 2119 |
| BcoDI | GTCTC | 8 cut(s) | 677, 853, 1176, 1856, 1955, 2699, 3235, 3614 |
| BfmI | CTRYAG | 1 cut(s) | 1621 |
| BfrI | CTTAAG | 2 cut(s) | 1438, 1772 |
| BfuAI | ACCTGC | 1 cut(s) | 883 |
| BglII | AGATCT | 1 cut(s) | 1456 |
| Bme1390I | CCNGG | 7 cut(s) | 1077, 1318, 1344, 1365, 1543, 2157, 3069 |
| Bme18I | GGWCC | 2 cut(s) | 85, 799 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1849, 1869 |
| BmeT110I | CYCGRG | 1 cut(s) | 1519 |
| BmgT120I | GGNCC | 4 cut(s) | 85, 799, 2269, 2270 |
| BmiI | GGNNCC | 6 cut(s) | 87, 183, 2270, 2271, 3198, 3648 |
| BmrFI | CCNGG | 7 cut(s) | 1077, 1318, 1344, 1365, 1543, 2157, 3069 |
| BmrI | ACTGGG | 3 cut(s) | 502, 2134, 3202 |
| BmtI | GCTAGC | 2 cut(s) | 1608, 3570 |
| BmuI | ACTGGG | 3 cut(s) | 502, 2134, 3202 |
| BpiI | GAAGAC | 4 cut(s) | 165, 239, 1124, 2756 |
| BpmI | CTGGAG | 5 cut(s) | 111, 1029, 1128, 1752, 3788 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2670 |
| Bpu14I | TTCGAA | 1 cut(s) | 2791 |
| BpuEI | CTTGAG | 4 cut(s) | 502, 2329, 2456, 3467 |
| Bsa29I | ATCGAT | 1 cut(s) | 330 |
| BsaAI | YACGTR | 1 cut(s) | 3724 |
| BsaBI | GATNNNNATC | 2 cut(s) | 405, 1917 |
| BsaHI | GRCGYC | 4 cut(s) | 20, 132, 162, 363 |
| BsaI | GGTCTC | 3 cut(s) | 1176, 1955, 3614 |
| BsaJI | CCNNGG | 8 cut(s) | 840, 1542, 1613, 1719, 3067, 3150, 3312, 3832 |
| BsaWI | WCCGGW | 1 cut(s) | 3199 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 81, 111, 1002, 1032, 2404, 2410, 2434, 2440 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 178, 808, 1082, 1148, 1821, 2485, 2499, 3074, 3347 |
| Bse118I | RCCGGY | 3 cut(s) | 178, 359, 461 |
| Bse1I | ACTGG | 9 cut(s) | 497, 716, 1027, 1385, 2129, 2419, 2741, 3197, 3549 |
| Bse3DI | GCAATG | 4 cut(s) | 215, 2465, 3257, 3744 |
| Bse8I | GATNNNNATC | 2 cut(s) | 405, 1917 |
| BseAI | TCCGGA | 1 cut(s) | 3199 |
| BseBI | CCWGG | 7 cut(s) | 1077, 1318, 1344, 1365, 1543, 2157, 3069 |
| BseCI | ATCGAT | 1 cut(s) | 330 |
| BseDI | CCNNGG | 8 cut(s) | 840, 1542, 1613, 1719, 3067, 3150, 3312, 3832 |
| BseGI | GGATG | 9 cut(s) | 915, 946, 1481, 2908, 3193, 3397, 3510, 3595, 3705 |
| BseJI | GATNNNNATC | 2 cut(s) | 405, 1917 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 178, 808, 1082, 1148, 1821, 2485, 2499, 3074, 3347 |
| BseMI | GCAATG | 4 cut(s) | 215, 2465, 3257, 3744 |
| BseMII | CTCAG | 5 cut(s) | 394, 2047, 2076, 2661, 3333 |
| BseNI | ACTGG | 9 cut(s) | 497, 716, 1027, 1385, 2129, 2419, 2741, 3197, 3549 |
| BsePI | GCGCGC | 1 cut(s) | 1608 |
| BseRI | GAGGAG | 4 cut(s) | 184, 265, 1131, 2936 |
| BseSI | GKGCMC | 4 cut(s) | 291, 2273, 2290, 3841 |
| BseXI | GCAGC | 9 cut(s) | 134, 378, 588, 1378, 2014, 2151, 3481, 3557, 3586 |
| BseYI | CCCAGC | 3 cut(s) | 2522, 2834, 3500 |
| BsgI | GTGCAG | 6 cut(s) | 528, 1447, 2187, 2280, 3556, 3814 |
| Bsh1236I | CGCG | 5 cut(s) | 112, 120, 451, 1610, 1996 |
| BshFI | GGCC | 5 cut(s) | 2155, 2271, 2536, 3118, 3142 |
| BshNI | GGYRCC | 1 cut(s) | 181 |
| BshVI | ATCGAT | 1 cut(s) | 330 |
| BsiHKAI | GWGCWC | 4 cut(s) | 291, 469, 2290, 3694 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1519 |
| BsiSI | CCGG | 7 cut(s) | 83, 179, 185, 360, 462, 1485, 3200 |
| BslFI | GGGAC | 4 cut(s) | 2087, 2234, 3294, 3671 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 178, 808, 1082, 1148, 1821, 2485, 2499, 3074, 3347 |
| BsmAI | GTCTC | 8 cut(s) | 677, 853, 1176, 1856, 1955, 2699, 3235, 3614 |
| BsmBI | CGTCTC | 1 cut(s) | 1856 |
| BsmFI | GGGAC | 4 cut(s) | 2087, 2234, 3294, 3671 |
| BsmI | GAATGC | 2 cut(s) | 3290, 3520 |
| BsnI | GGCC | 5 cut(s) | 2155, 2271, 2536, 3118, 3142 |
| Bso31I | GGTCTC | 3 cut(s) | 1176, 1955, 3614 |
| BsoBI | CYCGRG | 1 cut(s) | 1519 |
| Bsp119I | TTCGAA | 1 cut(s) | 2791 |
| Bsp120I | GGGCCC | 1 cut(s) | 2269 |
| Bsp1286I | GDGCHC | 7 cut(s) | 291, 357, 469, 2273, 2290, 3694, 3841 |
| Bsp13I | TCCGGA | 1 cut(s) | 3199 |
| Bsp1407I | TGTACA | 2 cut(s) | 1169, 3718 |
| Bsp143I | GATC | 8 cut(s) | 327, 1304, 1456, 2119, 2564, 2743, 3154, 3196 |
| Bsp19I | CCATGG | 2 cut(s) | 1613, 3312 |
| BspACI | CCGC | 9 cut(s) | 45, 80, 118, 357, 451, 1573, 1994, 2071, 2500 |
| BspANI | GGCC | 5 cut(s) | 2155, 2271, 2536, 3118, 3142 |
| BspCNI | CTCAG | 5 cut(s) | 393, 2046, 2075, 2662, 3334 |
| BspDI | ATCGAT | 1 cut(s) | 330 |
| BspEI | TCCGGA | 1 cut(s) | 3199 |
| BspFNI | CGCG | 5 cut(s) | 112, 120, 451, 1610, 1996 |
| BspHI | TCATGA | 3 cut(s) | 649, 2482, 3403 |
| BspLI | GGNNCC | 6 cut(s) | 87, 183, 2270, 2271, 3198, 3648 |
| BspMI | ACCTGC | 1 cut(s) | 883 |
| BspOI | GCTAGC | 2 cut(s) | 1608, 3570 |
| BspPI | GGATC | 4 cut(s) | 2738, 3162, 3191, 3204 |
| BspQI | GCTCTTC | 1 cut(s) | 3750 |
| BspT104I | TTCGAA | 1 cut(s) | 2791 |
| BspT107I | GGYRCC | 1 cut(s) | 181 |
| BspTI | CTTAAG | 2 cut(s) | 1438, 1772 |
| BspTNI | GGTCTC | 3 cut(s) | 1176, 1955, 3614 |
| BsrDI | GCAATG | 4 cut(s) | 215, 2465, 3257, 3744 |
| BsrFI | RCCGGY | 3 cut(s) | 178, 359, 461 |
| BsrGI | TGTACA | 2 cut(s) | 1169, 3718 |
| BsrI | ACTGG | 9 cut(s) | 497, 716, 1027, 1385, 2129, 2419, 2741, 3197, 3549 |
| BssAI | RCCGGY | 3 cut(s) | 178, 359, 461 |
| BssECI | CCNNGG | 8 cut(s) | 840, 1542, 1613, 1719, 3067, 3150, 3312, 3832 |
| BssHII | GCGCGC | 1 cut(s) | 1608 |
| BssMI | GATC | 8 cut(s) | 327, 1304, 1456, 2119, 2564, 2743, 3154, 3196 |
| BssNI | GRCGYC | 4 cut(s) | 20, 132, 162, 363 |
| BssT1I | CCWWGG | 6 cut(s) | 840, 1613, 1719, 3150, 3312, 3832 |
| Bst2UI | CCWGG | 7 cut(s) | 1077, 1318, 1344, 1365, 1543, 2157, 3069 |
| Bst4CI | ACNGT | 9 cut(s) | 581, 1867, 2210, 2402, 2710, 2966, 3035, 3050, 3577 |
| Bst6I | CTCTTC | 5 cut(s) | 242, 706, 1954, 3750, 3807 |
| BstACI | GRCGYC | 4 cut(s) | 20, 132, 162, 363 |
| BstAFI | CTTAAG | 2 cut(s) | 1438, 1772 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2584 |
| BstAUI | TGTACA | 2 cut(s) | 1169, 3718 |
| BstBAI | YACGTR | 1 cut(s) | 3724 |
| BstBI | TTCGAA | 1 cut(s) | 2791 |
| BstDSI | CCRYGG | 2 cut(s) | 1613, 3312 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1080, 2483 |
| BstF5I | GGATG | 9 cut(s) | 915, 946, 1481, 2908, 3193, 3397, 3510, 3595, 3705 |
| BstFNI | CGCG | 5 cut(s) | 112, 120, 451, 1610, 1996 |
| BstHHI | GCGC | 5 cut(s) | 114, 122, 1610, 1612, 2718 |
| BstKTI | GATC | 8 cut(s) | 330, 1307, 1459, 2122, 2567, 2746, 3157, 3199 |
| BstMAI | GTCTC | 8 cut(s) | 677, 853, 1176, 1856, 1955, 2699, 3235, 3614 |
| BstMBI | GATC | 8 cut(s) | 327, 1304, 1456, 2119, 2564, 2743, 3154, 3196 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 65, 515, 643, 1696, 2152, 2161, 2584, 3013 |
| BstNI | CCWGG | 7 cut(s) | 1077, 1318, 1344, 1365, 1543, 2157, 3069 |
| BstNSI | RCATGY | 3 cut(s) | 2150, 2681, 3635 |
| BstSCI | CCNGG | 7 cut(s) | 1075, 1316, 1342, 1363, 1541, 2155, 3067 |
| BstSFI | CTRYAG | 1 cut(s) | 1621 |
| BstSLI | GKGCMC | 4 cut(s) | 291, 2273, 2290, 3841 |
| BstUI | CGCG | 5 cut(s) | 112, 120, 451, 1610, 1996 |
| BstV1I | GCAGC | 9 cut(s) | 134, 378, 588, 1378, 2014, 2151, 3481, 3557, 3586 |
| BstV2I | GAAGAC | 4 cut(s) | 165, 239, 1124, 2756 |
| BstX2I | RGATCY | 3 cut(s) | 1456, 3154, 3196 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1193, 2781 |
| BstYI | RGATCY | 3 cut(s) | 1456, 3154, 3196 |
| Bsu15I | ATCGAT | 1 cut(s) | 330 |
| BsuRI | GGCC | 5 cut(s) | 2155, 2271, 2536, 3118, 3142 |
| BsuTUI | ATCGAT | 1 cut(s) | 330 |
| BtgI | CCRYGG | 2 cut(s) | 1613, 3312 |
| BtsCI | GGATG | 9 cut(s) | 915, 946, 1481, 2908, 3193, 3397, 3510, 3595, 3705 |
| BtsI | GCAGTG | 3 cut(s) | 516, 1416, 2786 |
| BveI | ACCTGC | 1 cut(s) | 883 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1391, 2858 |
| CciI | TCATGA | 3 cut(s) | 649, 2482, 3403 |
| CfoI | GCGC | 5 cut(s) | 114, 122, 1610, 1612, 2718 |
| Cfr10I | RCCGGY | 3 cut(s) | 178, 359, 461 |
| Cfr13I | GGNCC | 4 cut(s) | 85, 799, 2269, 2270 |
| ClaI | ATCGAT | 1 cut(s) | 330 |
| CseI | GACGC | 3 cut(s) | 20, 170, 352 |
| Csp6I | GTAC | 7 cut(s) | 1154, 1170, 2796, 2969, 3060, 3719, 3902 |
| CviQI | GTAC | 7 cut(s) | 1154, 1170, 2796, 2969, 3060, 3719, 3902 |
| DpnI | GATC | 8 cut(s) | 329, 1306, 1458, 2121, 2566, 2745, 3156, 3198 |
| DpnII | GATC | 8 cut(s) | 327, 1304, 1456, 2119, 2564, 2743, 3154, 3196 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 167 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1849, 1869 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 167 |
| EaeI | YGGCCR | 1 cut(s) | 3116 |
| Eam1104I | CTCTTC | 5 cut(s) | 242, 706, 1954, 3750, 3807 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1849, 1869 |
| EarI | CTCTTC | 5 cut(s) | 242, 706, 1954, 3750, 3807 |
| EciI | GGCGGA | 2 cut(s) | 1588, 2515 |
| Eco130I | CCWWGG | 6 cut(s) | 840, 1613, 1719, 3150, 3312, 3832 |
| Eco147I | AGGCCT | 2 cut(s) | 2155, 2536 |
| Eco24I | GRGCYC | 2 cut(s) | 357, 2273 |
| Eco31I | GGTCTC | 3 cut(s) | 1176, 1955, 3614 |
| Eco47I | GGWCC | 2 cut(s) | 85, 799 |
| Eco57I | CTGAAG | 3 cut(s) | 993, 1136, 1686 |
| Eco72I | CACGTG | 1 cut(s) | 3724 |
| Eco88I | CYCGRG | 1 cut(s) | 1519 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1080, 2483 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2269, 2270 |
| EcoRI | GAATTC | 1 cut(s) | 1630 |
| EcoRII | CCWGG | 7 cut(s) | 1075, 1316, 1342, 1363, 1541, 2155, 3067 |
| EcoT14I | CCWWGG | 6 cut(s) | 840, 1613, 1719, 3150, 3312, 3832 |
| EcoT22I | ATGCAT | 2 cut(s) | 866, 3522 |
| EcoT38I | GRGCYC | 2 cut(s) | 357, 2273 |
| ErhI | CCWWGG | 6 cut(s) | 840, 1613, 1719, 3150, 3312, 3832 |
| Esp3I | CGTCTC | 1 cut(s) | 1856 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 516, 548 |
| FaqI | GGGAC | 4 cut(s) | 2087, 2234, 3294, 3671 |
| FauI | CCCGC | 2 cut(s) | 364, 2001 |
| FauNDI | CATATG | 1 cut(s) | 563 |
| FbaI | TGATCA | 1 cut(s) | 2119 |
| FblI | GTMKAC | 1 cut(s) | 2905 |
| FokI | GGATG | 9 cut(s) | 922, 933, 1468, 2895, 3200, 3404, 3517, 3602, 3712 |
| FriOI | GRGCYC | 2 cut(s) | 357, 2273 |
| GlaI | GCGC | 5 cut(s) | 113, 121, 1609, 1611, 2717 |
| GsaI | CCCAGC | 3 cut(s) | 2526, 2838, 3504 |
| GsuI | CTGGAG | 5 cut(s) | 111, 1029, 1128, 1752, 3788 |
| HaeIII | GGCC | 5 cut(s) | 2155, 2271, 2536, 3118, 3142 |
| HapII | CCGG | 7 cut(s) | 83, 179, 185, 360, 462, 1485, 3200 |
| HgaI | GACGC | 3 cut(s) | 20, 170, 352 |
| HhaI | GCGC | 5 cut(s) | 114, 122, 1610, 1612, 2718 |
| Hin1I | GRCGYC | 4 cut(s) | 20, 132, 162, 363 |
| Hin6I | GCGC | 5 cut(s) | 112, 120, 1608, 1610, 2716 |
| HinP1I | GCGC | 5 cut(s) | 112, 120, 1608, 1610, 2716 |
| HincII | GTYRAC | 3 cut(s) | 2447, 3213, 3477 |
| HindII | GTYRAC | 3 cut(s) | 2447, 3213, 3477 |
| HindIII | AAGCTT | 1 cut(s) | 1577 |
| HpaII | CCGG | 7 cut(s) | 83, 179, 185, 360, 462, 1485, 3200 |
| HphI | GGTGA | 7 cut(s) | 277, 319, 1037, 1226, 1342, 1922, 3362 |
| Hpy99I | CGWCG | 7 cut(s) | 11, 14, 22, 25, 158, 170, 368 |
| HpyAV | CCTTC | 8 cut(s) | 112, 2208, 2489, 2552, 2757, 3300, 3381, 3802 |
| HpyCH4III | ACNGT | 9 cut(s) | 581, 1867, 2210, 2402, 2710, 2966, 3035, 3050, 3577 |
| HpyCH4IV | ACGT | 8 cut(s) | 20, 132, 919, 2090, 2243, 2569, 3723, 3850 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 65, 515, 643, 1696, 2152, 2161, 2584, 3013 |
| HpySE526I | ACGT | 8 cut(s) | 20, 132, 919, 2090, 2243, 2569, 3723, 3850 |
| Hsp92I | GRCGYC | 4 cut(s) | 20, 132, 162, 363 |
| HspAI | GCGC | 5 cut(s) | 112, 120, 1608, 1610, 2716 |
| Kpn2I | TCCGGA | 1 cut(s) | 3199 |
| KroI | GCCGGC | 1 cut(s) | 359 |
| KroNI | GCCGGC | 1 cut(s) | 361 |
| Ksp22I | TGATCA | 1 cut(s) | 2119 |
| Kzo9I | GATC | 8 cut(s) | 327, 1304, 1456, 2119, 2564, 2743, 3154, 3196 |
| LguI | GCTCTTC | 1 cut(s) | 3750 |
| LmnI | GCTCC | 7 cut(s) | 130, 205, 273, 1036, 1245, 1478, 3663 |
| Lsp1109I | GCAGC | 9 cut(s) | 134, 378, 588, 1378, 2014, 2151, 3481, 3557, 3586 |
| MaeII | ACGT | 8 cut(s) | 20, 132, 919, 2090, 2243, 2569, 3723, 3850 |
| MaeIII | GTNAC | 7 cut(s) | 70, 1018, 1988, 2183, 2848, 3540, 3625 |
| MalI | GATC | 8 cut(s) | 329, 1306, 1458, 2121, 2566, 2745, 3156, 3198 |
| MboI | GATC | 8 cut(s) | 327, 1304, 1456, 2119, 2564, 2743, 3154, 3196 |
| MflI | RGATCY | 3 cut(s) | 1456, 3154, 3196 |
| MhlI | GDGCHC | 7 cut(s) | 291, 357, 469, 2273, 2290, 3694, 3841 |
| MlyI | GAGTC | 5 cut(s) | 719, 2322, 2419, 2770, 3394 |
| MmeI | TCCRAC | 2 cut(s) | 2384, 2447 |
| Mph1103I | ATGCAT | 2 cut(s) | 866, 3522 |
| MreI | CGCCGGCG | 1 cut(s) | 359 |
| MroI | TCCGGA | 1 cut(s) | 3199 |
| MroNI | GCCGGC | 1 cut(s) | 359 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1935, 2868 |
| MslI | CAYNNNNRTG | 3 cut(s) | 281, 1766, 3456 |
| MspA1I | CMGCKG | 3 cut(s) | 1730, 1849, 2164 |
| MspCI | CTTAAG | 2 cut(s) | 1438, 1772 |
| MspI | CCGG | 7 cut(s) | 83, 179, 185, 360, 462, 1485, 3200 |
| MspR9I | CCNGG | 7 cut(s) | 1077, 1318, 1344, 1365, 1543, 2157, 3069 |
| Mva1269I | GAATGC | 2 cut(s) | 3290, 3520 |
| MvaI | CCWGG | 7 cut(s) | 1077, 1318, 1344, 1365, 1543, 2157, 3069 |
| MvnI | CGCG | 5 cut(s) | 112, 120, 451, 1610, 1996 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 65, 515, 643, 1696, 2152, 2161, 2584, 3013 |
| NaeI | GCCGGC | 1 cut(s) | 361 |
| NcoI | CCATGG | 2 cut(s) | 1613, 3312 |
| NdeI | CATATG | 1 cut(s) | 563 |
| NdeII | GATC | 8 cut(s) | 327, 1304, 1456, 2119, 2564, 2743, 3154, 3196 |
| NgoMIV | GCCGGC | 1 cut(s) | 359 |
| NheI | GCTAGC | 2 cut(s) | 1604, 3566 |
| NlaIV | GGNNCC | 6 cut(s) | 87, 183, 2270, 2271, 3198, 3648 |
| NmeAIII | GCCGAG | 1 cut(s) | 3094 |
| NmuCI | GTSAC | 4 cut(s) | 70, 1018, 2183, 3540 |
| NsiI | ATGCAT | 2 cut(s) | 866, 3522 |
| NspI | RCATGY | 3 cut(s) | 2150, 2681, 3635 |
| NspV | TTCGAA | 1 cut(s) | 2791 |
| PaeR7I | CTCGAG | 1 cut(s) | 1519 |
| PagI | TCATGA | 3 cut(s) | 649, 2482, 3403 |
| PauI | GCGCGC | 1 cut(s) | 1608 |
| PceI | AGGCCT | 2 cut(s) | 2155, 2536 |
| PciSI | GCTCTTC | 1 cut(s) | 3750 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 162, 3847 |
| PctI | GAATGC | 2 cut(s) | 3290, 3520 |
| PdiI | GCCGGC | 1 cut(s) | 361 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1935, 2868 |
| PflFI | GACNNNGTC | 2 cut(s) | 164, 803 |
| PfoI | TCCNGGA | 1 cut(s) | 1342 |
| PleI | GAGTC | 5 cut(s) | 719, 2321, 2419, 2769, 3394 |
| PmaCI | CACGTG | 1 cut(s) | 3724 |
| PmlI | CACGTG | 1 cut(s) | 3724 |
| PpsI | GAGTC | 5 cut(s) | 719, 2321, 2419, 2769, 3394 |
| Ppu21I | YACGTR | 1 cut(s) | 3724 |
| PsiI | TTATAA | 1 cut(s) | 2691 |
| Psp1406I | AACGTT | 3 cut(s) | 2090, 2243, 3850 |
| Psp6I | CCWGG | 7 cut(s) | 1075, 1316, 1342, 1363, 1541, 2155, 3067 |
| PspCI | CACGTG | 1 cut(s) | 3724 |
| PspFI | CCCAGC | 3 cut(s) | 2522, 2834, 3500 |
| PspGI | CCWGG | 7 cut(s) | 1075, 1316, 1342, 1363, 1541, 2155, 3067 |
| PspN4I | GGNNCC | 6 cut(s) | 87, 183, 2270, 2271, 3198, 3648 |
| PspOMI | GGGCCC | 1 cut(s) | 2269 |
| PspPI | GGNCC | 4 cut(s) | 85, 799, 2269, 2270 |
| PspXI | VCTCGAGB | 1 cut(s) | 1519 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1391, 2858 |
| PsuI | RGATCY | 3 cut(s) | 1456, 3154, 3196 |
| PsyI | GACNNNGTC | 2 cut(s) | 164, 803 |
| PteI | GCGCGC | 1 cut(s) | 1608 |
| PvuII | CAGCTG | 3 cut(s) | 1730, 1849, 2164 |
| RsaI | GTAC | 7 cut(s) | 1155, 1171, 2797, 2970, 3061, 3720, 3903 |
| RsaNI | GTAC | 7 cut(s) | 1154, 1170, 2796, 2969, 3060, 3719, 3902 |
| RseI | CAYNNNNRTG | 3 cut(s) | 281, 1766, 3456 |
| SapI | GCTCTTC | 1 cut(s) | 3750 |
| Sau3AI | GATC | 8 cut(s) | 327, 1304, 1456, 2119, 2564, 2743, 3154, 3196 |
| Sau96I | GGNCC | 4 cut(s) | 85, 799, 2269, 2270 |
| SchI | GAGTC | 5 cut(s) | 719, 2322, 2419, 2770, 3394 |
| ScrFI | CCNGG | 7 cut(s) | 1077, 1318, 1344, 1365, 1543, 2157, 3069 |
| SduI | GDGCHC | 7 cut(s) | 291, 357, 469, 2273, 2290, 3694, 3841 |
| SfcI | CTRYAG | 1 cut(s) | 1621 |
| Sfr274I | CTCGAG | 1 cut(s) | 1519 |
| SfuI | TTCGAA | 1 cut(s) | 2791 |
| SgrAI | CRCCGGYG | 2 cut(s) | 178, 359 |
| SinI | GGWCC | 2 cut(s) | 85, 799 |
| SlaI | CTCGAG | 1 cut(s) | 1519 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 281, 1766, 3456 |
| SmlI | CTYRAG | 7 cut(s) | 481, 1438, 1519, 1772, 2344, 2471, 3446 |
| SmoI | CTYRAG | 7 cut(s) | 481, 1438, 1519, 1772, 2344, 2471, 3446 |
| SseBI | AGGCCT | 2 cut(s) | 2155, 2536 |
| SsiI | CCGC | 9 cut(s) | 45, 80, 118, 357, 451, 1573, 1994, 2071, 2500 |
| SspI | AATATT | 1 cut(s) | 2947 |
| StuI | AGGCCT | 2 cut(s) | 2155, 2536 |
| StyD4I | CCNGG | 7 cut(s) | 1075, 1316, 1342, 1363, 1541, 2155, 3067 |
| StyI | CCWWGG | 6 cut(s) | 840, 1613, 1719, 3150, 3312, 3832 |
| TaaI | ACNGT | 9 cut(s) | 581, 1867, 2210, 2402, 2710, 2966, 3035, 3050, 3577 |
| TaiI | ACGT | 8 cut(s) | 23, 135, 922, 2093, 2246, 2572, 3726, 3853 |
| TaqI | TCGA | 6 cut(s) | 330, 475, 1520, 2791, 3030, 3612 |
| TatI | WGTACW | 4 cut(s) | 1169, 2795, 3059, 3718 |
| TauI | GCSGC | 2 cut(s) | 48, 82 |
| TseFI | GTSAC | 4 cut(s) | 70, 1018, 2183, 3540 |
| TseI | GCWGC | 9 cut(s) | 122, 391, 601, 1391, 2027, 2164, 3469, 3570, 3599 |
| Tsp45I | GTSAC | 4 cut(s) | 70, 1018, 2183, 3540 |
| TspGWI | ACGGA | 3 cut(s) | 1194, 1911, 3919 |
| Tth111I | GACNNNGTC | 2 cut(s) | 164, 803 |
| Vha464I | CTTAAG | 2 cut(s) | 1438, 1772 |
| VneI | GTGCAC | 2 cut(s) | 287, 2286 |
| VpaK11BI | GGWCC | 2 cut(s) | 85, 799 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1080, 2483 |
| XapI | RAATTY | 7 cut(s) | 654, 1338, 1630, 1795, 2110, 2786, 3412 |
| XbaI | TCTAGA | 1 cut(s) | 704 |
| XceI | RCATGY | 3 cut(s) | 2150, 2681, 3635 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3135 |
| XhoI | CTCGAG | 1 cut(s) | 1519 |
| XmiI | GTMKAC | 1 cut(s) | 2905 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1935, 2868 |
| ZraI | GACGTC | 2 cut(s) | 21, 133 |
| Zsp2I | ATGCAT | 2 cut(s) | 866, 3522 |