pycom07g23710

regulation of response to stimulus

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
24557105 .. 24563225
6121 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g23710.5

Sequence Viewer

Length: 3600 bp
ATGATAACATATCCTAGAAAAACACACCAGGGGAAGACACTCGCAGGGGCTTCGTCAGCCATCTATGCAGAGCTCTCGATCAGAAAAGGCGACCGCCTGTCCGAGCTCCTTACAGCGATTCGAGAGTCAAGGCTTTCGATTGTAGTTTTCTCTCAAAGCTATGCTTCTTCCACTTGGTGCTTGAAGGAACTCGTGCAAATCCTGGAATGCAACGATAACAAGAACCAAATTATCGTCCCCATTTTCTATGAAGTCGATCCATCCGATATTCGTAGACTCAAAGGAAATTTTGCAGAAGGTTTTGCTAAACATGAACGCCATTCTCACGTTGACGTGAAGGAGGTGCAGAGCTGGAGGTCTGCTCTTGCCAGAGCAACCGATTTATCTGGTTGGGATTCAAAAAATTATAAGGATGATGCAGAGCTTATTGAGAAAATTGTAGAATATGTTTTTAAGAAATTAATCTGCAACTCATCAACATCAAGCAAAGATAATGGCCTGGTTGGAATGGATTCTCATATGCATAAAATGCATTTAATATTACATCCTCATGGAGTTGAAACGAATACTGTTCGCATTGTTGGAATATGGGGTATGGGTGGTTTAGGCAAAACAACCATCGCTAGAGCTGTTTATGATGAAATCGCTTGTCGATTTGAAGCTTCTTGCTTTCTTGAAAACGTCAAGGAGGGTTTCATGAAGCATGGCAAACTACATATGCAGACACAACTTCTATTGAGTCTCTCGAACAACAAGGTGGGGTGTTCCGACATTTCAAATAAGGGTTTCCAGGTGATGTTAAAGAGCCTAGGTCAGAGAAAAGTTCTTATTGTTGTTGATGATGTGGACAAATTAGAACAAATTGAAGCTTTACTCGGAGAGCAACATTCTTTCGGTGGTGGAAGTAGAATCATTATAACAACTAGAGATTTATTTTTAGTGATTCTGGAGCTCTGGAACTCTTTAAGCGGTATGCTTTTAGAAATAACCAACCCACCAAAGATTATGATCGATCTTTCGAGGCATGCCATACAATATGCTCAAGGTTTGCCTTTAGCACTCAAAGTCTTAGGAGCTTTTCTTGATAACAAAACTGTATCCGAGTGGGAAAATGTGTTAGAAAAAATAAGGAAAATCCCGTTGAGGGGAGTTCATGATGTACTTAAGACAAGCTTCGATGGACTAGATGACACAGAGAAGAACATCTTTCTAGATATTGCATGTTTCTTTAAAGGGATGGATAAAGATTATGCAACCGAAATTCTGGACGGTTGTGGTTTCTATCCTCGTACTGGAATAACAGTTCTGATCAATCGAGCTCTCATAACTGTCTCAGAGGAGGGGAAATTGGAGATGCATGATTCACTAGAGGAAATGGGTCGGGAAATCGTTCGCCAAGAATCTATCAAAGACCCTGGGAGACGAAGTAGGTTGTGGAATTATGAAGATGTTCATCATGTGCTAACTCAAAATACGGCTACAGAAGCAGTTGAAAGCATAATCCTTGATTTGTCGAACTCACGTGAGGTACGCTTAAATCCGGAAGCTTTTGTTAGTATGACTCAACTAAGACTTCTCAAGATCGATCTAAGTCCTGAGAAGTACCAATTTTTTAACGATGATTGCTGCAAACAACACCTGAATGGGCACTTAAAGTTTCTTTCTAGTGAGTTGAGGAGTCTCTCTTGGCTAGGATTATCCCCTAAGTCTTTGCCATCCAACTTTCAATTCAAAAATCTTGTTGACCTTGACATAAGATTTAGTCGCATTGACCGACTTTGGGAAGGAACCCAGACGCTGGAAAAGTTGAAATTCATCAATTTAAGTTATTGTCGACACCTTAAGGAAACTCCCGACTTCACAAAGGTGCCAAATCTTGAGAGGCTAATTCTTGAACGTTGTACAAGTTTAGTTAAGGTTCACCCATCTATTTGGACTCTTACAAACCTTGTTTTGTTGAATCTTACTGGGTGCAAAGGACTTAAGATTCTAGCTAGCAACATTCATATGAAATATCTTAAAACACTTGGCCTTGAAGGCTGCTTGAATCTTGAAATATTTCCAGAGATTTCAGAAGTTATGGAGGGAGTATCAGAGCTTAATTTATCCGGGTCAAAAGTTAAAGAACTGCCCTCGTCAATTCAGAATCTCACAGGGTTGCGTATTTTGGTCTTAAAAGATTGCAAAGAACTTCAGAGTCTTCCAAGCAGCATTCATATGAAATCTCTCAATACCCTTGATCTTTCTGGCTGCTCGAATCTTGAGATGTTTCCAGAGATTTCAGAAGTTATGGAGAAACTATCCGTTCTAAATTTATCCGAGTCAAAAGTTAAAGAGTTGCCCTCGTCAATTCATAATCTCACGGGGTTGTGTTTTTTGGTCTTAAAAGATTGCAAGGAACTTAAGAGTCTTCCAAGCAGCATTCATATGAAATCTCTCGATACGATCGATCTTTCTGGCTGCTCGAATCTTGAGATATTTGTAGAGATTTCAGAAGTTATGAAGAAACTGTCAGTTCTAAATTTATCCGAGTCAAAAGTTAAGGAACTGCCCTCAATTCATAATCTCACGGGGTTGCATTTTTTGGTCTTAAAAGATTGCAAGGAACTTAAGAGTCTTCCAAGCAACATTCATATGAAATCTCTCAGAAACCTTGATGTTTCTGGCTGCTCGAATCTTGAGATGTTTCTAGAGATTTCAGAAGTTATGGATAAACTATCAATTCTAAATTTATCCGAGTCAAAAATTAAAGAACTGCCCTCAGTTCATAATCTCACAGGGTTGCATTCTTTGGTCTTAAAAGATTGCAAGGAACTTAAGAGTCTTTCAAACAGCATTCATATGAAATTTCTCACAACCCTTGATCTTTCTGGCTGCTCGAGTCTTGAGATGTTTCCAGAGATTGCAGAGATTATGGGGGGAGTACATGAGCTTAATTTATCCGAGTCAAAAGTTAAAGAACTGCCCTCGTCAATTAATAATCTCACGGGGTTGTATTTTTTGGTCTTAAAAGATTGTAAGGAACTTAAGAGTCTTCCAAGCAGCATTCATATGACATCTCTCAAGACCCTCGATCTTTCTGGTTGCTCGAGTCTTGAGATGTTTCCAGAAATTTCAGAAGTTATGAAGGAACTATCGTATCTTAATTTATCTGGGTCAAAAATTAAGGAACTATCATCGTCAATTAATAATCTCACAAGGTTAAGTTGGTTGGACCTACAAGATTGCAAGGAACTAAAAAGTCTTCCAAGCAGCATTTGTCAACTCAAGTCCCTTAGATATGTTTCTCTTTCTGGTTGCACCAAATTTGAGGCGTTTCCAAGTATTGAAGAAAATATGGAAGAATTAAGGGAGCTTCACTTGGATGGAACATGTATCAGAGAGCTTTCCCCCTGGATTGAACGCCTTCAGGGGCTTGTGATATTAAATCTGAGAAACTGCGAAAGCCTTTTACATCTTCCCGACACTCTCTGGAATTTGGCACACCTTTCCGCCCTCAATGTCTGTGGGTGCTCAAATCTTTCTCAATTTCCTCTCGTTCTCAACTCTGAGGATTTAGAACACTTGTGGGATTCTGCAGTGGGCATGCTGTCATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1200

Amino Acids

134.93

Weight (kDa)

6.08

Isoelectric Point (pI)

39.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 408, 917
AccB1I GGYRCC 1 cut(s) 1867
AccB7I CCANNNNNTGG 1 cut(s) 1798
AccI GTMKAC 2 cut(s) 274, 1834
AccIII TCCGGA 1 cut(s) 1540
AciI CCGC 3 cut(s) 94, 969, 3492
AclI AACGTT 1 cut(s) 1897
AclWI GGATC 1 cut(s) 251
AcuI CTGAAG 2 cut(s) 2177, 3392
AcvI CACGTG 1 cut(s) 1523
AdeI CACNNNGTG 1 cut(s) 177
AfaI GTAC 6 cut(s) 1161, 1291, 1530, 1604, 1903, 2925
AfiI CCNNNNNNNGG 5 cut(s) 1144, 1145, 1292, 1780, 1798
AflII CTTAAG 7 cut(s) 1163, 1841, 1982, 2402, 2609, 2816, 3026
AflIII ACRYGT 1 cut(s) 3371
AhdI GACNNNNNGTC 1 cut(s) 97
AjiI CACGTC 1 cut(s) 334
AjnI CCWGG 6 cut(s) 27, 201, 498, 789, 1414, 3392
AjuI GAANNNNNNNTTGG 2 cut(s) 1712, 1744
AleI CACNNNNGTG 1 cut(s) 1865
AloI GAACNNNNNNTCC 2 cut(s) 1287, 1319
Alw21I GWGCWC 5 cut(s) 75, 108, 954, 1321, 3515
Alw26I GTCTC 4 cut(s) 746, 1336, 1414, 1685
AlwI GGATC 1 cut(s) 251
AlwNI CAGNNNCTG 1 cut(s) 1798
Ama87I CYCGRG 2 cut(s) 2878, 3088
Aor13HI TCCGGA 1 cut(s) 1540
AoxI GGCC 2 cut(s) 496, 2029
AseI ATTAAT 3 cut(s) 461, 2976, 3186
Asp700I GAANNNNTTC 5 cut(s) 511, 1389, 1449, 2058, 3405
AspA2I CCTAGG 1 cut(s) 808
AspS9I GGNCC 1 cut(s) 3214
AsuC2I CCSGG 1 cut(s) 2110
AsuHPI GGTGA 2 cut(s) 805, 1913
AsuNHI GCTAGC 1 cut(s) 1994
AvaI CYCGRG 2 cut(s) 2878, 3088
AvaII GGWCC 1 cut(s) 3214
AvrII CCTAGG 1 cut(s) 808
BaeGI GKGCMC 1 cut(s) 1650
BaeI ACNNNNGTAYC 2 cut(s) 3122, 3155
BanI GGYRCC 1 cut(s) 1867
BanII GRGCYC 4 cut(s) 75, 108, 954, 1321
BauI CACGAG 1 cut(s) 191
BbrPI CACGTG 1 cut(s) 1523
BbsI GAAGAC 6 cut(s) 41, 2192, 2402, 2609, 3026, 3236
Bbv12I GWGCWC 5 cut(s) 75, 108, 954, 1321, 3515
BccI CCATC 8 cut(s) 68, 268, 626, 1172, 1231, 1723, 1933, 3359
BceAI ACGGC 1 cut(s) 1491
BcgI CGANNNNNNTGC 4 cut(s) 33, 57, 67, 91
BciT130I CCWGG 6 cut(s) 29, 203, 500, 791, 1416, 3394
BciVI GTATCC 1 cut(s) 1108
BclI TGATCA 1 cut(s) 1308
BcnI CCSGG 1 cut(s) 2110
BcoDI GTCTC 4 cut(s) 746, 1336, 1414, 1685
BfmI CTRYAG 2 cut(s) 1479, 3576
BfrI CTTAAG 7 cut(s) 1163, 1841, 1982, 2402, 2609, 2816, 3026
BfuI GTATCC 1 cut(s) 1108
BglI GCCNNNNNGGC 1 cut(s) 2037
BlnI CCTAGG 1 cut(s) 808
Bme1390I CCNGG 7 cut(s) 29, 203, 500, 791, 1416, 2110, 3394
Bme18I GGWCC 1 cut(s) 3214
BmeRI GACNNNNNGTC 1 cut(s) 97
BmeT110I CYCGRG 2 cut(s) 2878, 3088
BmgBI CACGTC 1 cut(s) 334
BmgT120I GGNCC 1 cut(s) 3214
BmiI GGNNCC 2 cut(s) 1789, 1869
BmrFI CCNGG 7 cut(s) 29, 203, 500, 791, 1416, 2110, 3394
BmrI ACTGGG 1 cut(s) 1977
BmsI GCATC 2 cut(s) 406, 1344
BmtI GCTAGC 1 cut(s) 1998
BmuI ACTGGG 1 cut(s) 1977
BpiI GAAGAC 6 cut(s) 41, 2192, 2402, 2609, 3026, 3236
BplI GAGNNNNNCTC 4 cut(s) 346, 378, 2327, 2359
BpmI CTGGAG 2 cut(s) 373, 968
BpuMI CCSGG 1 cut(s) 2110
Bsa29I ATCGAT 3 cut(s) 1011, 1584, 2448
BsaAI YACGTR 1 cut(s) 1523
BsaBI GATNNNNATC 2 cut(s) 1007, 1452
BsaJI CCNNGG 5 cut(s) 28, 808, 1414, 1415, 3392
BsaWI WCCGGW 1 cut(s) 1540
BsaXI ACNNNNNCTCC 2 cut(s) 1411, 1441
Bsc4I CCNNNNNNNGG 5 cut(s) 1144, 1145, 1292, 1780, 1798
Bse1I ACTGG 2 cut(s) 1297, 1972
Bse8I GATNNNNATC 2 cut(s) 1007, 1452
BseAI TCCGGA 1 cut(s) 1540
BseBI CCWGG 6 cut(s) 29, 203, 500, 791, 1416, 3394
BseCI ATCGAT 3 cut(s) 1011, 1584, 2448
BseDI CCNNGG 5 cut(s) 28, 808, 1414, 1415, 3392
BseGI GGATG 6 cut(s) 260, 418, 544, 1242, 1715, 3370
BseJI GATNNNNATC 2 cut(s) 1007, 1452
BseLI CCNNNNNNNGG 5 cut(s) 1144, 1145, 1292, 1780, 1798
BseMII CTCAG 6 cut(s) 1347, 1587, 2659, 2775, 3422, 3540
BseNI ACTGG 2 cut(s) 1297, 1972
BseRI GAGGAG 2 cut(s) 1352, 1690
BseSI GKGCMC 1 cut(s) 1650
BsgI GTGCAG 1 cut(s) 365
Bsh1285I CGRYCG 2 cut(s) 94, 2448
BshFI GGCC 2 cut(s) 498, 2031
BshNI GGYRCC 1 cut(s) 1867
BshVI ATCGAT 3 cut(s) 1011, 1584, 2448
BsiEI CGRYCG 2 cut(s) 94, 2448
BsiHKAI GWGCWC 5 cut(s) 75, 108, 954, 1321, 3515
BsiHKCI CYCGRG 2 cut(s) 2878, 3088
BsiSI CCGG 2 cut(s) 1541, 2109
BslFI GGGAC 2 cut(s) 221, 3256
BslI CCNNNNNNNGG 5 cut(s) 1144, 1145, 1292, 1780, 1798
BsmAI GTCTC 4 cut(s) 746, 1336, 1414, 1685
BsmBI CGTCTC 1 cut(s) 1414
BsmFI GGGAC 2 cut(s) 221, 3256
BsmI GAATGC 6 cut(s) 212, 2211, 2421, 2785, 2835, 3045
BsnI GGCC 2 cut(s) 498, 2031
BsoBI CYCGRG 2 cut(s) 2878, 3088
Bsp1286I GDGCHC 6 cut(s) 75, 108, 954, 1321, 1650, 3515
Bsp13I TCCGGA 1 cut(s) 1540
Bsp1407I TGTACA 1 cut(s) 1901
BspACI CCGC 3 cut(s) 94, 969, 3492
BspANI GGCC 2 cut(s) 498, 2031
BspCNI CTCAG 6 cut(s) 1346, 1588, 2658, 2774, 3423, 3541
BspDI ATCGAT 3 cut(s) 1011, 1584, 2448
BspEI TCCGGA 1 cut(s) 1540
BspHI TCATGA 2 cut(s) 696, 1153
BspLI GGNNCC 2 cut(s) 1789, 1869
BspMAI CTGCAG 1 cut(s) 3580
BspOI GCTAGC 1 cut(s) 1998
BspPI GGATC 1 cut(s) 251
BspT107I GGYRCC 1 cut(s) 1867
BspTI CTTAAG 7 cut(s) 1163, 1841, 1982, 2402, 2609, 2816, 3026
BsrGI TGTACA 1 cut(s) 1901
BsrI ACTGG 2 cut(s) 1297, 1972
BssECI CCNNGG 5 cut(s) 28, 808, 1414, 1415, 3392
BssSI CACGAG 1 cut(s) 191
BssT1I CCWWGG 1 cut(s) 808
Bst2BI CACGAG 1 cut(s) 191
Bst2UI CCWGG 6 cut(s) 29, 203, 500, 791, 1416, 3394
Bst4CI ACNGT 6 cut(s) 571, 1096, 1271, 1303, 1330, 2511
BstAFI CTTAAG 7 cut(s) 1163, 1841, 1982, 2402, 2609, 2816, 3026
BstAPI GCANNNNNTGC 1 cut(s) 529
BstAUI TGTACA 1 cut(s) 1901
BstBAI YACGTR 1 cut(s) 1523
BstC8I GCNNGC 3 cut(s) 1026, 1996, 3587
BstF5I GGATG 6 cut(s) 260, 418, 544, 1242, 1715, 3370
BstMAI GTCTC 4 cut(s) 746, 1336, 1414, 1685
BstMCI CGRYCG 2 cut(s) 94, 2448
BstMWI GCNNNNNNNGC 5 cut(s) 56, 65, 529, 1484, 2037
BstNI CCWGG 6 cut(s) 29, 203, 500, 791, 1416, 3394
BstNSI RCATGY 4 cut(s) 1028, 1224, 3375, 3589
BstSCI CCNGG 7 cut(s) 27, 201, 498, 789, 1414, 2108, 3392
BstSFI CTRYAG 2 cut(s) 1479, 3576
BstSLI GKGCMC 1 cut(s) 1650
BstV2I GAAGAC 6 cut(s) 41, 2192, 2402, 2609, 3026, 3236
BstXI CCANNNNNNTGG 1 cut(s) 1932
Bsu15I ATCGAT 3 cut(s) 1011, 1584, 2448
BsuI GTATCC 1 cut(s) 1108
BsuRI GGCC 2 cut(s) 498, 2031
BsuTUI ATCGAT 3 cut(s) 1011, 1584, 2448
BtgZI GCGATG 1 cut(s) 604
BtrI CACGTC 1 cut(s) 334
BtsCI GGATG 6 cut(s) 260, 418, 544, 1242, 1715, 3370
BtsI GCAGTG 1 cut(s) 3585
BtsIMutI CAGTG 1 cut(s) 3585
Cac8I GCNNGC 3 cut(s) 1026, 1996, 3587
CaiI CAGNNNCTG 1 cut(s) 1798
CciI TCATGA 2 cut(s) 696, 1153
Cfr13I GGNCC 1 cut(s) 3214
ClaI ATCGAT 3 cut(s) 1011, 1584, 2448
CseI GACGC 1 cut(s) 1804
Csp6I GTAC 6 cut(s) 1160, 1290, 1529, 1603, 1902, 2924
CspCI CAANNNNNGTGG 2 cut(s) 3487, 3522
CviQI GTAC 6 cut(s) 1160, 1290, 1529, 1603, 1902, 2924
DraI TTTAAA 1 cut(s) 1231
DraIII CACNNNGTG 1 cut(s) 177
DriI GACNNNNNGTC 1 cut(s) 97
Eam1105I GACNNNNNGTC 1 cut(s) 97
EciI GGCGGA 1 cut(s) 3481
Ecl136II GAGCTC 4 cut(s) 73, 106, 952, 1319
Eco130I CCWWGG 1 cut(s) 808
Eco24I GRGCYC 4 cut(s) 75, 108, 954, 1321
Eco47I GGWCC 1 cut(s) 3214
Eco53kI GAGCTC 4 cut(s) 73, 106, 952, 1319
Eco57I CTGAAG 2 cut(s) 2177, 3392
Eco72I CACGTG 1 cut(s) 1523
Eco88I CYCGRG 2 cut(s) 2878, 3088
EcoICRI GAGCTC 4 cut(s) 73, 106, 952, 1319
EcoRII CCWGG 6 cut(s) 27, 201, 498, 789, 1414, 3392
EcoT14I CCWWGG 1 cut(s) 808
EcoT22I ATGCAT 3 cut(s) 525, 534, 1359
EcoT38I GRGCYC 4 cut(s) 75, 108, 954, 1321
ErhI CCWWGG 1 cut(s) 808
Esp3I CGTCTC 1 cut(s) 1414
FalI AAGNNNNNCTT 6 cut(s) 148, 180, 1157, 1189, 1190, 1222
FaqI GGGAC 2 cut(s) 221, 3256
FauNDI CATATG 8 cut(s) 519, 717, 2007, 2217, 2427, 2634, 2841, 3051
FbaI TGATCA 1 cut(s) 1308
FblI GTMKAC 2 cut(s) 274, 1834
FokI GGATG 6 cut(s) 247, 425, 531, 1249, 1702, 3377
FriOI GRGCYC 4 cut(s) 75, 108, 954, 1321
GsuI CTGGAG 2 cut(s) 373, 968
HaeIII GGCC 2 cut(s) 498, 2031
HapII CCGG 2 cut(s) 1541, 2109
HgaI GACGC 1 cut(s) 1804
HincII GTYRAC 4 cut(s) 331, 1744, 1835, 3263
HindII GTYRAC 4 cut(s) 331, 1744, 1835, 3263
HindIII AAGCTT 4 cut(s) 660, 867, 1171, 1545
HpaII CCGG 2 cut(s) 1541, 2109
HphI GGTGA 2 cut(s) 805, 1913
Hpy166II GTNNAC 7 cut(s) 275, 331, 847, 1744, 1835, 1921, 3263
Hpy8I GTNNAC 7 cut(s) 275, 331, 847, 1744, 1835, 1921, 3263
HpyAV CCTTC 7 cut(s) 178, 290, 331, 1778, 2030, 3121, 3416
HpyCH4III ACNGT 6 cut(s) 571, 1096, 1271, 1303, 1330, 2511
HpyCH4IV ACGT 5 cut(s) 327, 333, 681, 1522, 1897
HpyF10VI GCNNNNNNNGC 5 cut(s) 56, 65, 529, 1484, 2037
HpySE526I ACGT 5 cut(s) 327, 333, 681, 1522, 1897
Kpn2I TCCGGA 1 cut(s) 1540
Ksp22I TGATCA 1 cut(s) 1308
LmnI GCTCC 4 cut(s) 111, 949, 1073, 3352
LweI GCATC 2 cut(s) 406, 1344
MaeII ACGT 5 cut(s) 327, 333, 681, 1522, 1897
MhlI GDGCHC 6 cut(s) 75, 108, 954, 1321, 1650, 3515
MmeI TCCRAC 5 cut(s) 484, 562, 792, 1743, 3192
Mph1103I ATGCAT 3 cut(s) 525, 534, 1359
MroI TCCGGA 1 cut(s) 1540
MroXI GAANNNNTTC 5 cut(s) 511, 1389, 1449, 2058, 3405
MspCI CTTAAG 7 cut(s) 1163, 1841, 1982, 2402, 2609, 2816, 3026
MspI CCGG 2 cut(s) 1541, 2109
MspR9I CCNGG 7 cut(s) 29, 203, 500, 791, 1416, 2110, 3394
Mva1269I GAATGC 6 cut(s) 212, 2211, 2421, 2785, 2835, 3045
MvaI CCWGG 6 cut(s) 29, 203, 500, 791, 1416, 3394
MwoI GCNNNNNNNGC 5 cut(s) 56, 65, 529, 1484, 2037
NciI CCSGG 1 cut(s) 2110
NdeI CATATG 8 cut(s) 519, 717, 2007, 2217, 2427, 2634, 2841, 3051
NheI GCTAGC 1 cut(s) 1994
NlaIV GGNNCC 2 cut(s) 1789, 1869
NsiI ATGCAT 3 cut(s) 525, 534, 1359
NspI RCATGY 4 cut(s) 1028, 1224, 3375, 3589
OliI CACNNNNGTG 1 cut(s) 1865
PaeI GCATGC 2 cut(s) 1028, 3589
PaeR7I CTCGAG 2 cut(s) 2878, 3088
PagI TCATGA 2 cut(s) 696, 1153
PasI CCCWGGG 1 cut(s) 1415
PciI ACATGT 1 cut(s) 3371
PcsI WCGNNNNNNNCGW 3 cut(s) 261, 1771, 2445
PctI GAATGC 6 cut(s) 212, 2211, 2421, 2785, 2835, 3045
PdmI GAANNNNTTC 5 cut(s) 511, 1389, 1449, 2058, 3405
PflMI CCANNNNNTGG 1 cut(s) 1798
PfoI TCCNGGA 1 cut(s) 201
Ple19I CGATCG 1 cut(s) 2448
PmaCI CACGTG 1 cut(s) 1523
PmlI CACGTG 1 cut(s) 1523
Ppu21I YACGTR 1 cut(s) 1523
PscI ACATGT 1 cut(s) 3371
PshBI ATTAAT 3 cut(s) 461, 2976, 3186
PsiI TTATAA 2 cut(s) 408, 917
Psp124BI GAGCTC 4 cut(s) 75, 108, 954, 1321
Psp1406I AACGTT 1 cut(s) 1897
Psp6I CCWGG 6 cut(s) 27, 201, 498, 789, 1414, 3392
PspCI CACGTG 1 cut(s) 1523
PspGI CCWGG 6 cut(s) 27, 201, 498, 789, 1414, 3392
PspN4I GGNNCC 2 cut(s) 1789, 1869
PspPI GGNCC 1 cut(s) 3214
PspXI VCTCGAGB 2 cut(s) 2878, 3088
PstI CTGCAG 1 cut(s) 3580
PstNI CAGNNNCTG 1 cut(s) 1798
PvuI CGATCG 1 cut(s) 2448
RsaI GTAC 6 cut(s) 1161, 1291, 1530, 1604, 1903, 2925
RsaNI GTAC 6 cut(s) 1160, 1290, 1529, 1603, 1902, 2924
SacI GAGCTC 4 cut(s) 75, 108, 954, 1321
SalI GTCGAC 1 cut(s) 1833
Sau96I GGNCC 1 cut(s) 3214
ScrFI CCNGG 7 cut(s) 29, 203, 500, 791, 1416, 2110, 3394
SduI GDGCHC 6 cut(s) 75, 108, 954, 1321, 1650, 3515
SfaNI GCATC 2 cut(s) 406, 1344
SfcI CTRYAG 2 cut(s) 1479, 3576
Sfr274I CTCGAG 2 cut(s) 2878, 3088
SinI GGWCC 1 cut(s) 3214
SlaI CTCGAG 2 cut(s) 2878, 3088
SphI GCATGC 2 cut(s) 1028, 3589
SsiI CCGC 3 cut(s) 94, 969, 3492
SspI AATATT 2 cut(s) 540, 2058
SstI GAGCTC 4 cut(s) 75, 108, 954, 1321
StyD4I CCNGG 7 cut(s) 27, 201, 498, 789, 1414, 2108, 3392
StyI CCWWGG 1 cut(s) 808
TaaI ACNGT 6 cut(s) 571, 1096, 1271, 1303, 1330, 2511
TaiI ACGT 5 cut(s) 330, 336, 684, 1525, 1900
TaqII GACCGA 1 cut(s) 1788
TatI WGTACW 3 cut(s) 1159, 1901, 2923
TscAI CASTG 1 cut(s) 3585
TspGWI ACGGA 1 cut(s) 2293
TspRI CASTG 1 cut(s) 3585
Van91I CCANNNNNTGG 1 cut(s) 1798
Vha464I CTTAAG 7 cut(s) 1163, 1841, 1982, 2402, 2609, 2816, 3026
VpaK11BI GGWCC 1 cut(s) 3214
VspI ATTAAT 3 cut(s) 461, 2976, 3186
XbaI TCTAGA 2 cut(s) 1210, 2689
XceI RCATGY 4 cut(s) 1028, 1224, 3375, 3589
XhoI CTCGAG 2 cut(s) 2878, 3088
XmaJI CCTAGG 1 cut(s) 808
XmiI GTMKAC 2 cut(s) 274, 1834
XmnI GAANNNNTTC 5 cut(s) 511, 1389, 1449, 2058, 3405
Zsp2I ATGCAT 3 cut(s) 525, 534, 1359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.