Rmu_sc0001909.1_g000018

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001909.1
Physical Location & Seq
Forward (+)
70520 .. 71849
1330 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001909.1_g000018.1.cds

Sequence Viewer

Length: 828 bp
atgatggctgcttcatcttcaactggtggttgctgcaagtatgatgtcttcctcagttttagaggagaagacacccgcaagatcttctccggccatctttacaaagctctaaaacagaaagcaatctacaccttcatcgattctgaagagctcgaaaaaggcaacaaaatttcagagctactcacatatattgaggaatcaaggatttcgattgtcgttttatctcaaaactatgcctcttccacttggtgcttaaatgagcttgtcaaaatcctggattgcatggttacgaagaagcagatggtgctgcctatcttctacgaagtggatccctctgatctccggaaaatcaaaggaaaatatgcagaagcttttgccaaacatggagaaaatcctaaccttgacaaagaagaggtggagagctggaggtccgctgtaaatagagttgcggatctatctggctgggattcgagcgaatatgagggtgacagcaagcttattgaggaaattgttgcagatactcatagaaaactgatccacacatcgtccaataaagccaatggcttgattggaatggattcccacattacagaaatgatgtcaagattatgtcttcagatgaatgatgttcgtgttgttggaatatggggtatgggcggtctaggaaaaacaaccattgctagagctgttttcgatgaaattgcttggcaatttgaacactcctgctttcttgataatgtcaaagaagcttttaaaaacaagcttgaagtacgaaagcaggaagaacttctgtccaagtatgccgagtgtaggtttggacagaggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

275

Amino Acids

31.3

Weight (kDa)

5.95

Isoelectric Point (pI)

47.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 342
AciI CCGC 4 cut(s) 76, 432, 449, 657
AclWI GGATC 4 cut(s) 323, 336, 459, 529
AcoI YGGCCR 1 cut(s) 91
AcsI RAATTY 1 cut(s) 168
AcuI CTGAAG 2 cut(s) 165, 599
AdeI CACNNNGTG 1 cut(s) 249
AfaI GTAC 1 cut(s) 771
AfiI CCNNNNNNNGG 1 cut(s) 810
AgsI TTSAA 3 cut(s) 21, 716, 767
AjnI CCWGG 1 cut(s) 273
Alw21I GWGCWC 1 cut(s) 153
AlwI GGATC 4 cut(s) 323, 336, 459, 529
Aor13HI TCCGGA 1 cut(s) 342
AoxI GGCC 1 cut(s) 91
ApeKI GCWGC 3 cut(s) 8, 33, 307
ApoI RAATTY 1 cut(s) 168
Asp700I GAANNNNTTC 2 cut(s) 577, 786
AspS9I GGNCC 1 cut(s) 429
AsuHPI GGTGA 1 cut(s) 497
AvaII GGWCC 1 cut(s) 429
BamHI GGATCC 1 cut(s) 328
BanII GRGCYC 1 cut(s) 153
BarI GAAGNNNNNNTAC 2 cut(s) 32, 64
BbsI GAAGAC 3 cut(s) 40, 75, 605
Bbv12I GWGCWC 1 cut(s) 153
BbvI GCAGC 2 cut(s) 20, 294
BccI CCATC 2 cut(s) 102, 295
BcgI CGANNNNNNTGC 2 cut(s) 683, 717
BciT130I CCWGG 1 cut(s) 275
BfaI CTAG 2 cut(s) 662, 681
BglII AGATCT 1 cut(s) 81
BisI GCNGC 3 cut(s) 9, 34, 308
BlsI GCNGC 3 cut(s) 10, 35, 309
Bme1390I CCNGG 1 cut(s) 275
Bme18I GGWCC 1 cut(s) 429
BmgT120I GGNCC 1 cut(s) 429
BmiI GGNNCC 1 cut(s) 330
BmrFI CCNGG 1 cut(s) 275
BpiI GAAGAC 3 cut(s) 40, 75, 605
BpmI CTGGAG 1 cut(s) 445
Bsa29I ATCGAT 1 cut(s) 138
BsaWI WCCGGW 1 cut(s) 342
Bsc4I CCNNNNNNNGG 1 cut(s) 810
Bse1I ACTGG 1 cut(s) 28
Bse3DI GCAATG 1 cut(s) 675
BseAI TCCGGA 1 cut(s) 342
BseBI CCWGG 1 cut(s) 275
BseCI ATCGAT 1 cut(s) 138
BseLI CCNNNNNNNGG 1 cut(s) 810
BseMI GCAATG 1 cut(s) 675
BseMII CTCAG 1 cut(s) 67
BseNI ACTGG 1 cut(s) 28
BseRI GAGGAG 1 cut(s) 78
BseXI GCAGC 2 cut(s) 20, 294
BseYI CCCAGC 1 cut(s) 462
BshFI GGCC 1 cut(s) 93
BshVI ATCGAT 1 cut(s) 138
BsiHKAI GWGCWC 1 cut(s) 153
BsiSI CCGG 2 cut(s) 90, 343
BslI CCNNNNNNNGG 1 cut(s) 810
BsnI GGCC 1 cut(s) 93
Bsp1286I GDGCHC 1 cut(s) 153
Bsp13I TCCGGA 1 cut(s) 342
Bsp143I GATC 5 cut(s) 81, 328, 337, 451, 534
BspACI CCGC 4 cut(s) 76, 432, 449, 657
BspANI GGCC 1 cut(s) 93
BspCNI CTCAG 1 cut(s) 66
BspDI ATCGAT 1 cut(s) 138
BspEI TCCGGA 1 cut(s) 342
BspLI GGNNCC 1 cut(s) 330
BspPI GGATC 4 cut(s) 323, 336, 459, 529
BspQI GCTCTTC 1 cut(s) 141
BsrDI GCAATG 1 cut(s) 675
BsrI ACTGG 1 cut(s) 28
BssMI GATC 5 cut(s) 81, 328, 337, 451, 534
Bst2UI CCWGG 1 cut(s) 275
Bst6I CTCTTC 3 cut(s) 141, 244, 405
BstAPI GCANNNNNTGC 1 cut(s) 304
BstC8I GCNNGC 1 cut(s) 494
BstDEI CTNAG 1 cut(s) 53
BstKTI GATC 5 cut(s) 84, 331, 340, 454, 537
BstMBI GATC 5 cut(s) 81, 328, 337, 451, 534
BstMWI GCNNNNNNNGC 1 cut(s) 304
BstNI CCWGG 1 cut(s) 275
BstSCI CCNGG 1 cut(s) 273
BstV1I GCAGC 2 cut(s) 20, 294
BstV2I GAAGAC 3 cut(s) 40, 75, 605
BstX2I RGATCY 3 cut(s) 81, 328, 451
BstYI RGATCY 3 cut(s) 81, 328, 451
Bsu15I ATCGAT 1 cut(s) 138
BsuRI GGCC 1 cut(s) 93
BsuTUI ATCGAT 1 cut(s) 138
Cac8I GCNNGC 1 cut(s) 494
Cfr13I GGNCC 1 cut(s) 429
ClaI ATCGAT 1 cut(s) 138
Csp6I GTAC 1 cut(s) 770
CviAII CATG 2 cut(s) 283, 383
CviQI GTAC 1 cut(s) 770
DdeI CTNAG 1 cut(s) 53
DpnI GATC 5 cut(s) 83, 330, 339, 453, 536
DpnII GATC 5 cut(s) 81, 328, 337, 451, 534
DraI TTTAAA 1 cut(s) 754
DraIII CACNNNGTG 1 cut(s) 249
EaeI YGGCCR 1 cut(s) 91
Eam1104I CTCTTC 3 cut(s) 141, 244, 405
EarI CTCTTC 3 cut(s) 141, 244, 405
Ecl136II GAGCTC 1 cut(s) 151
Eco24I GRGCYC 1 cut(s) 153
Eco47I GGWCC 1 cut(s) 429
Eco53kI GAGCTC 1 cut(s) 151
Eco57I CTGAAG 2 cut(s) 165, 599
EcoICRI GAGCTC 1 cut(s) 151
EcoRII CCWGG 1 cut(s) 273
EcoT38I GRGCYC 1 cut(s) 153
FaeI CATG 2 cut(s) 286, 386
FatI CATG 2 cut(s) 282, 382
FauI CCCGC 1 cut(s) 83
Fnu4HI GCNGC 3 cut(s) 9, 34, 308
FriOI GRGCYC 1 cut(s) 153
Fsp4HI GCNGC 3 cut(s) 9, 34, 308
FspBI CTAG 2 cut(s) 662, 681
GluI GCNGC 3 cut(s) 9, 34, 308
GsaI CCCAGC 1 cut(s) 466
GsuI CTGGAG 1 cut(s) 445
HaeIII GGCC 1 cut(s) 93
HapII CCGG 2 cut(s) 90, 343
Hin1II CATG 2 cut(s) 286, 386
HindIII AAGCTT 4 cut(s) 369, 494, 747, 761
HinfI GANTC 4 cut(s) 140, 197, 467, 578
HpaII CCGG 2 cut(s) 90, 343
HphI GGTGA 1 cut(s) 497
Hpy188I TCNGA 4 cut(s) 145, 175, 337, 618
Hpy188III TCNNGA 3 cut(s) 343, 603, 731
HpyAV CCTTC 1 cut(s) 142
HpyCH4V TGCA 4 cut(s) 36, 282, 365, 515
HpyF10VI GCNNNNNNNGC 1 cut(s) 304
HpyF3I CTNAG 1 cut(s) 53
Hsp92II CATG 2 cut(s) 286, 386
Kpn2I TCCGGA 1 cut(s) 342
Kzo9I GATC 5 cut(s) 81, 328, 337, 451, 534
LguI GCTCTTC 1 cut(s) 141
Lsp1109I GCAGC 2 cut(s) 20, 294
MaeI CTAG 2 cut(s) 662, 681
MaeIII GTNAC 2 cut(s) 286, 485
MalI GATC 5 cut(s) 83, 330, 339, 453, 536
MboI GATC 5 cut(s) 81, 328, 337, 451, 534
MflI RGATCY 3 cut(s) 81, 328, 451
MhlI GDGCHC 1 cut(s) 153
MluCI AATT 4 cut(s) 168, 507, 699, 710
MmeI TCCRAC 1 cut(s) 619
MroI TCCGGA 1 cut(s) 342
MroXI GAANNNNTTC 2 cut(s) 577, 786
MseI TTAA 2 cut(s) 254, 753
MspA1I CMGCKG 1 cut(s) 434
MspI CCGG 2 cut(s) 90, 343
MspR9I CCNGG 1 cut(s) 275
MvaI CCWGG 1 cut(s) 275
MwoI GCNNNNNNNGC 1 cut(s) 304
NdeII GATC 5 cut(s) 81, 328, 337, 451, 534
NlaIII CATG 2 cut(s) 286, 386
NlaIV GGNNCC 1 cut(s) 330
NmuCI GTSAC 1 cut(s) 485
PciSI GCTCTTC 1 cut(s) 141
PdmI GAANNNNTTC 2 cut(s) 577, 786
PfeI GAWTC 4 cut(s) 140, 197, 467, 578
PfoI TCCNGGA 1 cut(s) 273
PkrI GCNGC 3 cut(s) 10, 35, 309
Psp124BI GAGCTC 1 cut(s) 153
Psp6I CCWGG 1 cut(s) 273
PspFI CCCAGC 1 cut(s) 462
PspGI CCWGG 1 cut(s) 273
PspN4I GGNNCC 1 cut(s) 330
PspPI GGNCC 1 cut(s) 429
PsuI RGATCY 3 cut(s) 81, 328, 451
RsaI GTAC 1 cut(s) 771
RsaNI GTAC 1 cut(s) 770
SacI GAGCTC 1 cut(s) 153
SapI GCTCTTC 1 cut(s) 141
SaqAI TTAA 2 cut(s) 254, 753
SatI GCNGC 3 cut(s) 9, 34, 308
Sau3AI GATC 5 cut(s) 81, 328, 337, 451, 534
Sau96I GGNCC 1 cut(s) 429
ScrFI CCNGG 1 cut(s) 275
SduI GDGCHC 1 cut(s) 153
SinI GGWCC 1 cut(s) 429
Sse9I AATT 4 cut(s) 168, 507, 699, 710
SsiI CCGC 4 cut(s) 76, 432, 449, 657
SspMI CTAG 2 cut(s) 662, 681
SstI GAGCTC 1 cut(s) 153
StyD4I CCNGG 1 cut(s) 273
TaqI TCGA 5 cut(s) 138, 153, 209, 470, 693
TasI AATT 4 cut(s) 168, 507, 699, 710
TfiI GAWTC 4 cut(s) 140, 197, 467, 578
Tru1I TTAA 2 cut(s) 254, 753
Tru9I TTAA 2 cut(s) 254, 753
TseFI GTSAC 1 cut(s) 485
TseI GCWGC 3 cut(s) 8, 33, 307
Tsp45I GTSAC 1 cut(s) 485
TspDTI ATGAA 3 cut(s) 124, 635, 711
VpaK11BI GGWCC 1 cut(s) 429
XapI RAATTY 1 cut(s) 168
XmnI GAANNNNTTC 2 cut(s) 577, 786
XspI CTAG 2 cut(s) 662, 681
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.