pycom08g19990

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
19910935 .. 19913659
2725 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g19990.1

Sequence Viewer

Length: 1674 bp
ATGGCTGCTTCTTCTTCTTCTTCTCCATCTGGCCCTCAATGGAAATACGATGTGTTCATCAATTTCAGAGGGGAAGACACTCGCAAGGGCTTCGTCAGCCATCTTTACAGAGCTCTGCGTCAGAAATCAATCAACACCTTCATCGATGCCCAAGAGCTCAGAAAAGGCGACCGCCTTTCCGAGCTTCTGACAGCGATTCGAGAGTCAAGGCTTTCGCTTGTTGTTTTCTCTCAAAACTATGCTTCTTCCACTTGGTGCTTGAAAGAACTCGTGGAAATCTTGAAATGCAAGGCTACCATGAACCAGATTGTGCTCCCCATTTTCTACGCAGTCGATCCATCCGATGTTCGTAAACTCAAGGGAAGATTCGCGGAAGCTTTTGCTCAGCACGATCACGATTCTAACGCCGAAATGAAAGAGGTTGAGAGCTGGAGATCTGCTCTTACAACTGCCACCAGTTTTTCCGGCTGGGATTCGCGAAACTATAAGGAGGATGCAAAGCTTATTGAGGACATTGTGGAAGATGTTTTTAAAAAATTGATCCACATCTCATCAACACCACGCGAAGATAATGGCTTGGTTGAAATGGATTCTCATATGCACCAAATGCATTTACGATTACATCCTAATCCTCCTGGGGTGGAGTTGGATGGTGTTCGTGTTGTAGGAATATGGGGAATGGGTGGTTTAGGCAAAACAACCATCGCTAGAGCTGTTTACAAAGAAATCGCTTGTCGATTTGAAGCAGGTTGCTTTCTTGAAAATGTCAAGGAGGGTTTCATGAAGTATGACGTACTACATATGCAGAAACTTCTTCTATCTAGTATCTCGGACAACAAGGTGGGGCGTTCCGACATATTGAAAAATGGTTTCGAGGTGATGTTAAAAAGCCTTGGTCACAGAAAAGTTCTTGTTGTTGTTGATGATGTAGACAAATTAGCCCAAATTGAAGCCTTACTCGGAAAGGAACATTCTTTTGGTGGTGGAAGTAGAATCATTATAACAACTAGAGATGCACAATTACTAAGTGGAGCTGATGCGATATATGGGCCCAAGCTTTTCAGTGATGATGGAGCTCTAGAACTCTTTAGGCGGTACGCCTTCAAGGCAAACCAACCCCCCAGAGATTATGATGATCTTTCGAGGCGTGTCGTACAATATGCTCAGGGTCTGCCTTTAGCACTCAAAGTCTTGGGAGCTTTTCTTTATAACAAAACTGTACGCGAGTGGGAAGATGTGTTAGAAAAAATAAGGAAAATCCCACAAGGGGAAATTCATGATGTGCTTAAAACAAGCTTCGATGGACTAGATGACACAGAGAAGGACATCTTTCTAGATATTGCATGTTTCTTTAAAGGAATGCAAAAGGACTATGCAATTGAAATTATGGACGGTTGTGGTTTCTATCCTGATACTGGTATAAGAGTTCTAATTGATCGAGCTCTCATAACTGTCTCATGGAGGGGGGAACTGGAGATGCATGATTCACTACAGGAAATGGGTAGGGAAATGGTTCGTCGAGAATCTATCAAAGAGCCTGGGAGACGAAGCAGGTTGTGGAGTTATGAAGATGTTCATCATGTGCTAACTCAAAATACGGGTACAGAAGCGGTTGAAAGCATAATCCTGGATTTGTCGAACTCAGATGAGCAGCATTCGTATGCAATCTCTTGA

Protein Analysis

558

Amino Acids

63.17

Weight (kDa)

5.95

Isoelectric Point (pI)

40.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 15 - 195 1.8e-57 TIR domain
TIR_2 PF13676 18 - 128 2.6e-16 TIR domain
NB-ARC PF00931 217 - 371 1e-16 NB-ARC domain
WHD_ROQ1 PF23282 439 - 509 6.9e-21 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1001, 1209
Acc36I ACCTGC 2 cut(s) 737, 1542
AccI GTMKAC 1 cut(s) 930
AccII CGCG 4 cut(s) 371, 478, 564, 1224
AciI CCGC 4 cut(s) 172, 371, 1093, 1610
AclWI GGATC 2 cut(s) 329, 535
AcsI RAATTY 1 cut(s) 1272
AdeI CACNNNGTG 1 cut(s) 255
AfaI GTAC 5 cut(s) 795, 1097, 1155, 1221, 1603
AfiI CCNNNNNNNGG 2 cut(s) 1267, 1415
AjnI CCWGG 3 cut(s) 634, 1537, 1626
AjuI GAANNNNNNNTTGG 2 cut(s) 960, 992
Alw21I GWGCWC 5 cut(s) 115, 159, 315, 1078, 1444
Alw26I GTCTC 2 cut(s) 1459, 1537
AlwI GGATC 2 cut(s) 329, 535
AlwNI CAGNNNCTG 1 cut(s) 1171
AoxI GGCC 2 cut(s) 31, 1049
ApaI GGGCCC 1 cut(s) 1053
ApeKI GCWGC 2 cut(s) 5, 1651
ApoI RAATTY 1 cut(s) 1272
Asp700I GAANNNNTTC 2 cut(s) 1512, 1572
AspS9I GGNCC 3 cut(s) 32, 1049, 1050
AsuHPI GGTGA 1 cut(s) 889
BaeGI GKGCMC 1 cut(s) 1053
BanII GRGCYC 5 cut(s) 115, 159, 1053, 1078, 1444
BauI CACGAG 1 cut(s) 269
BbsI GAAGAC 1 cut(s) 81
Bbv12I GWGCWC 5 cut(s) 115, 159, 315, 1078, 1444
BbvI GCAGC 1 cut(s) 1663
BccI CCATC 7 cut(s) 34, 108, 346, 644, 710, 1064, 1295
BcgI CGANNNNNNTGC 2 cut(s) 73, 107
BciT130I CCWGG 3 cut(s) 636, 1539, 1628
BcoDI GTCTC 2 cut(s) 1459, 1537
BfaI CTAG 6 cut(s) 708, 822, 1008, 1079, 1307, 1334
BfmI CTRYAG 1 cut(s) 1490
BfuAI ACCTGC 2 cut(s) 737, 1542
BglI GCCNNNNNGGC 1 cut(s) 1106
BglII AGATCT 1 cut(s) 434
BisI GCNGC 2 cut(s) 6, 1652
BlpI GCTNAGC 1 cut(s) 384
BlsI GCNGC 2 cut(s) 7, 1653
Bme1390I CCNGG 3 cut(s) 636, 1539, 1628
BmgT120I GGNCC 3 cut(s) 32, 1049, 1050
BmiI GGNNCC 1 cut(s) 1051
BmrFI CCNGG 3 cut(s) 636, 1539, 1628
BmsI GCATC 5 cut(s) 136, 484, 1003, 1027, 1467
BpiI GAAGAC 1 cut(s) 81
BplI GAGNNNNNCTC 2 cut(s) 424, 456
BpmI CTGGAG 2 cut(s) 451, 1493
Bpu10I CCTNAGC 1 cut(s) 1164
Bpu1102I GCTNAGC 1 cut(s) 384
BpuEI CTTGAG 1 cut(s) 341
Bsa29I ATCGAT 1 cut(s) 144
BsaBI GATNNNNATC 2 cut(s) 545, 1575
BsaJI CCNNGG 3 cut(s) 635, 892, 1538
Bsc4I CCNNNNNNNGG 2 cut(s) 1267, 1415
Bse1I ACTGG 3 cut(s) 456, 1420, 1476
Bse8I GATNNNNATC 2 cut(s) 545, 1575
BseBI CCWGG 3 cut(s) 636, 1539, 1628
BseCI ATCGAT 1 cut(s) 144
BseDI CCNNGG 3 cut(s) 635, 892, 1538
BseGI GGATG 4 cut(s) 338, 499, 622, 655
BseJI GATNNNNATC 2 cut(s) 545, 1575
BseLI CCNNNNNNNGG 2 cut(s) 1267, 1415
BseMII CTCAG 4 cut(s) 172, 398, 1178, 1656
BseNI ACTGG 3 cut(s) 456, 1420, 1476
BseSI GKGCMC 1 cut(s) 1053
BseXI GCAGC 1 cut(s) 1663
BseYI CCCAGC 1 cut(s) 468
Bsh1236I CGCG 4 cut(s) 371, 478, 564, 1224
Bsh1285I CGRYCG 1 cut(s) 172
BshFI GGCC 2 cut(s) 33, 1051
BshVI ATCGAT 1 cut(s) 144
BsiEI CGRYCG 1 cut(s) 172
BsiHKAI GWGCWC 5 cut(s) 115, 159, 315, 1078, 1444
BsiSI CCGG 1 cut(s) 465
BslI CCNNNNNNNGG 2 cut(s) 1267, 1415
BsmAI GTCTC 2 cut(s) 1459, 1537
BsmBI CGTCTC 1 cut(s) 1537
BsmI GAATGC 2 cut(s) 1365, 1654
BsnI GGCC 2 cut(s) 33, 1051
Bsp120I GGGCCC 1 cut(s) 1049
Bsp1286I GDGCHC 6 cut(s) 115, 159, 315, 1053, 1078, 1444
Bsp143I GATC 6 cut(s) 334, 391, 434, 540, 1135, 1435
Bsp1720I GCTNAGC 1 cut(s) 384
Bsp68I TCGCGA 1 cut(s) 478
BspACI CCGC 4 cut(s) 172, 371, 1093, 1610
BspANI GGCC 2 cut(s) 33, 1051
BspCNI CTCAG 4 cut(s) 171, 397, 1177, 1655
BspDI ATCGAT 1 cut(s) 144
BspFNI CGCG 4 cut(s) 371, 478, 564, 1224
BspHI TCATGA 2 cut(s) 780, 1276
BspLI GGNNCC 1 cut(s) 1051
BspMI ACCTGC 2 cut(s) 737, 1542
BspPI GGATC 2 cut(s) 329, 535
BsrI ACTGG 3 cut(s) 456, 1420, 1476
BssECI CCNNGG 3 cut(s) 635, 892, 1538
BssMI GATC 6 cut(s) 334, 391, 434, 540, 1135, 1435
BssSI CACGAG 1 cut(s) 269
BssT1I CCWWGG 1 cut(s) 892
Bst2BI CACGAG 1 cut(s) 269
Bst2UI CCWGG 3 cut(s) 636, 1539, 1628
Bst4CI ACNGT 3 cut(s) 1219, 1394, 1453
BstAPI GCANNNNNTGC 1 cut(s) 607
BstDEI CTNAG 5 cut(s) 158, 384, 1025, 1164, 1642
BstF5I GGATG 4 cut(s) 338, 499, 622, 655
BstFNI CGCG 4 cut(s) 371, 478, 564, 1224
BstKTI GATC 6 cut(s) 337, 394, 437, 543, 1138, 1438
BstMAI GTCTC 2 cut(s) 1459, 1537
BstMBI GATC 6 cut(s) 334, 391, 434, 540, 1135, 1435
BstMCI CGRYCG 1 cut(s) 172
BstMWI GCNNNNNNNGC 3 cut(s) 96, 607, 1106
BstNI CCWGG 3 cut(s) 636, 1539, 1628
BstNSI RCATGY 1 cut(s) 1347
BstSCI CCNGG 3 cut(s) 634, 1537, 1626
BstSFI CTRYAG 1 cut(s) 1490
BstSLI GKGCMC 1 cut(s) 1053
BstUI CGCG 4 cut(s) 371, 478, 564, 1224
BstV1I GCAGC 1 cut(s) 1663
BstV2I GAAGAC 1 cut(s) 81
BstX2I RGATCY 1 cut(s) 434
BstYI RGATCY 1 cut(s) 434
Bsu15I ATCGAT 1 cut(s) 144
BsuRI GGCC 2 cut(s) 33, 1051
BsuTUI ATCGAT 1 cut(s) 144
BtgZI GCGATG 1 cut(s) 688
BtsCI GGATG 4 cut(s) 338, 499, 622, 655
BtsIMutI CAGTG 1 cut(s) 1069
BtuMI TCGCGA 1 cut(s) 478
BveI ACCTGC 2 cut(s) 737, 1542
CaiI CAGNNNCTG 1 cut(s) 1171
CciI TCATGA 2 cut(s) 780, 1276
Cfr13I GGNCC 3 cut(s) 32, 1049, 1050
ClaI ATCGAT 1 cut(s) 144
CseI GACGC 1 cut(s) 107
Csp6I GTAC 5 cut(s) 794, 1096, 1154, 1220, 1602
CviAII CATG 7 cut(s) 298, 781, 1277, 1344, 1458, 1481, 1580
CviQI GTAC 5 cut(s) 794, 1096, 1154, 1220, 1602
DdeI CTNAG 5 cut(s) 158, 384, 1025, 1164, 1642
DpnI GATC 6 cut(s) 336, 393, 436, 542, 1137, 1437
DpnII GATC 6 cut(s) 334, 391, 434, 540, 1135, 1435
DraI TTTAAA 2 cut(s) 532, 1354
DraIII CACNNNGTG 1 cut(s) 255
Ecl136II GAGCTC 4 cut(s) 113, 157, 1076, 1442
Eco130I CCWWGG 1 cut(s) 892
Eco24I GRGCYC 5 cut(s) 115, 159, 1053, 1078, 1444
Eco53kI GAGCTC 4 cut(s) 113, 157, 1076, 1442
EcoICRI GAGCTC 4 cut(s) 113, 157, 1076, 1442
EcoRII CCWGG 3 cut(s) 634, 1537, 1626
EcoT14I CCWWGG 1 cut(s) 892
EcoT22I ATGCAT 2 cut(s) 612, 1482
EcoT38I GRGCYC 5 cut(s) 115, 159, 1053, 1078, 1444
ErhI CCWWGG 1 cut(s) 892
Esp3I CGTCTC 1 cut(s) 1537
FaeI CATG 7 cut(s) 301, 784, 1280, 1347, 1461, 1484, 1583
FalI AAGNNNNNCTT 2 cut(s) 1313, 1345
FatI CATG 7 cut(s) 297, 780, 1276, 1343, 1457, 1480, 1579
FauNDI CATATG 2 cut(s) 597, 801
FblI GTMKAC 1 cut(s) 930
Fnu4HI GCNGC 2 cut(s) 6, 1652
FokI GGATG 4 cut(s) 325, 506, 609, 662
FriOI GRGCYC 5 cut(s) 115, 159, 1053, 1078, 1444
Fsp4HI GCNGC 2 cut(s) 6, 1652
FspBI CTAG 6 cut(s) 708, 822, 1008, 1079, 1307, 1334
GluI GCNGC 2 cut(s) 6, 1652
GsaI CCCAGC 1 cut(s) 472
GsuI CTGGAG 2 cut(s) 451, 1493
HaeIII GGCC 2 cut(s) 33, 1051
HapII CCGG 1 cut(s) 465
HgaI GACGC 1 cut(s) 107
Hin1II CATG 7 cut(s) 301, 784, 1280, 1347, 1461, 1484, 1583
HindIII AAGCTT 4 cut(s) 375, 500, 1055, 1294
HinfI GANTC 9 cut(s) 196, 203, 366, 398, 473, 590, 993, 1484, 1523
HpaII CCGG 1 cut(s) 465
HphI GGTGA 1 cut(s) 889
Hpy166II GTNNAC 3 cut(s) 353, 718, 931
Hpy8I GTNNAC 3 cut(s) 353, 718, 931
Hpy99I CGWCG 1 cut(s) 1521
HpyAV CCTTC 3 cut(s) 148, 1111, 1315
HpyCH4III ACNGT 3 cut(s) 1219, 1394, 1453
HpyCH4IV ACGT 1 cut(s) 792
HpyF10VI GCNNNNNNNGC 3 cut(s) 96, 607, 1106
HpyF3I CTNAG 5 cut(s) 158, 384, 1025, 1164, 1642
HpySE526I ACGT 1 cut(s) 792
Hsp92II CATG 7 cut(s) 301, 784, 1280, 1347, 1461, 1484, 1583
Kzo9I GATC 6 cut(s) 334, 391, 434, 540, 1135, 1435
LmnI GCTCC 4 cut(s) 318, 1031, 1073, 1196
Lsp1109I GCAGC 1 cut(s) 1663
LweI GCATC 5 cut(s) 136, 484, 1003, 1027, 1467
MaeI CTAG 6 cut(s) 708, 822, 1008, 1079, 1307, 1334
MaeII ACGT 1 cut(s) 792
MaeIII GTNAC 1 cut(s) 896
MalI GATC 6 cut(s) 336, 393, 436, 542, 1137, 1437
MboI GATC 6 cut(s) 334, 391, 434, 540, 1135, 1435
MfeI CAATTG 1 cut(s) 1377
MflI RGATCY 1 cut(s) 434
MhlI GDGCHC 6 cut(s) 115, 159, 315, 1053, 1078, 1444
MluCI AATT 9 cut(s) 61, 536, 935, 945, 1019, 1272, 1377, 1383, 1431
MlyI GAGTC 1 cut(s) 212
MmeI TCCRAC 2 cut(s) 627, 876
Mph1103I ATGCAT 2 cut(s) 612, 1482
MroXI GAANNNNTTC 2 cut(s) 1512, 1572
MseI TTAA 4 cut(s) 531, 884, 1287, 1353
MslI CAYNNNNRTG 1 cut(s) 1659
MspI CCGG 1 cut(s) 465
MspR9I CCNGG 3 cut(s) 636, 1539, 1628
MunI CAATTG 1 cut(s) 1377
Mva1269I GAATGC 2 cut(s) 1365, 1654
MvaI CCWGG 3 cut(s) 636, 1539, 1628
MvnI CGCG 4 cut(s) 371, 478, 564, 1224
MwoI GCNNNNNNNGC 3 cut(s) 96, 607, 1106
NdeI CATATG 2 cut(s) 597, 801
NdeII GATC 6 cut(s) 334, 391, 434, 540, 1135, 1435
NlaIII CATG 7 cut(s) 301, 784, 1280, 1347, 1461, 1484, 1583
NlaIV GGNNCC 1 cut(s) 1051
NmuCI GTSAC 1 cut(s) 896
NruI TCGCGA 1 cut(s) 478
NsiI ATGCAT 2 cut(s) 612, 1482
NspI RCATGY 1 cut(s) 1347
PagI TCATGA 2 cut(s) 780, 1276
PcsI WCGNNNNNNNCGW 1 cut(s) 339
PctI GAATGC 2 cut(s) 1365, 1654
PdmI GAANNNNTTC 2 cut(s) 1512, 1572
PfeI GAWTC 8 cut(s) 196, 366, 398, 473, 590, 993, 1484, 1523
PfoI TCCNGGA 1 cut(s) 1626
PkrI GCNGC 2 cut(s) 7, 1653
PleI GAGTC 1 cut(s) 211
PpsI GAGTC 1 cut(s) 211
PsiI TTATAA 2 cut(s) 1001, 1209
Psp124BI GAGCTC 4 cut(s) 115, 159, 1078, 1444
Psp6I CCWGG 3 cut(s) 634, 1537, 1626
PspFI CCCAGC 1 cut(s) 468
PspGI CCWGG 3 cut(s) 634, 1537, 1626
PspN4I GGNNCC 1 cut(s) 1051
PspOMI GGGCCC 1 cut(s) 1049
PspPI GGNCC 3 cut(s) 32, 1049, 1050
PstNI CAGNNNCTG 1 cut(s) 1171
PsuI RGATCY 1 cut(s) 434
RruI TCGCGA 1 cut(s) 478
RsaI GTAC 5 cut(s) 795, 1097, 1155, 1221, 1603
RsaNI GTAC 5 cut(s) 794, 1096, 1154, 1220, 1602
RseI CAYNNNNRTG 1 cut(s) 1659
SacI GAGCTC 4 cut(s) 115, 159, 1078, 1444
SaqAI TTAA 4 cut(s) 531, 884, 1287, 1353
SatI GCNGC 2 cut(s) 6, 1652
Sau3AI GATC 6 cut(s) 334, 391, 434, 540, 1135, 1435
Sau96I GGNCC 3 cut(s) 32, 1049, 1050
SchI GAGTC 1 cut(s) 212
ScrFI CCNGG 3 cut(s) 636, 1539, 1628
SduI GDGCHC 6 cut(s) 115, 159, 315, 1053, 1078, 1444
SfaNI GCATC 5 cut(s) 136, 484, 1003, 1027, 1467
SfcI CTRYAG 1 cut(s) 1490
SmiMI CAYNNNNRTG 1 cut(s) 1659
SmlI CTYRAG 1 cut(s) 356
SmoI CTYRAG 1 cut(s) 356
Sse9I AATT 9 cut(s) 61, 536, 935, 945, 1019, 1272, 1377, 1383, 1431
SsiI CCGC 4 cut(s) 172, 371, 1093, 1610
SspMI CTAG 6 cut(s) 708, 822, 1008, 1079, 1307, 1334
SstI GAGCTC 4 cut(s) 115, 159, 1078, 1444
StyD4I CCNGG 3 cut(s) 634, 1537, 1626
StyI CCWWGG 1 cut(s) 892
TaaI ACNGT 3 cut(s) 1219, 1394, 1453
TaiI ACGT 1 cut(s) 795
TasI AATT 9 cut(s) 61, 536, 935, 945, 1019, 1272, 1377, 1383, 1431
TfiI GAWTC 8 cut(s) 196, 366, 398, 473, 590, 993, 1484, 1523
Tru1I TTAA 4 cut(s) 531, 884, 1287, 1353
Tru9I TTAA 4 cut(s) 531, 884, 1287, 1353
TscAI CASTG 1 cut(s) 1069
TseFI GTSAC 1 cut(s) 896
TseI GCWGC 2 cut(s) 5, 1651
Tsp45I GTSAC 1 cut(s) 896
TspDTI ATGAA 9 cut(s) 46, 130, 314, 428, 769, 797, 1265, 1565, 1581
TspRI CASTG 1 cut(s) 1069
XapI RAATTY 1 cut(s) 1272
XbaI TCTAGA 2 cut(s) 1078, 1333
XceI RCATGY 1 cut(s) 1347
XmiI GTMKAC 1 cut(s) 930
XmnI GAANNNNTTC 2 cut(s) 1512, 1572
XspI CTAG 6 cut(s) 708, 822, 1008, 1079, 1307, 1334
Zsp2I ATGCAT 2 cut(s) 612, 1482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.