Rorug05G0351400

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
43835151 .. 43841345
6195 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0351400.1

Sequence Viewer

Length: 2421 bp
ATGAGCCAACTTTCATCTCTTAGTTTCCGGCCTTATTACGGCTCTCTCTGTTTCTCAGTTAACCGGACACCCTCTTTTCGTCGCTTCAACCTCCTCCCCTTCCGATGCCCCACTACCAGAGCAATGGCATCCCAGTCCCACATTGTTGGTTATCCCCGCATAGGACCCAAGAGAGAGCTCAAGTTTGCTTTGGAATCATTCTGGGATGGAAAGACTAGTGCCGACGAATTACAGGCCGTGGCTGCAGGTATTAGGTCATCCATTTGGAAGCAGCTGGCCGACGCCGGTATTAAGTATATTCCAAGTAACTCCTTCTCATACTATGATCAGATGCTAGACACCACCGCCATGCTTGGGGCTGTACCCCCTAGATATGGTTGGCAACGCGACGAGGTTGGATTTGAGACTTACTTTTCCATGGCTAGGGGAAATGCCAATGTTCCTGCTATGGAAATGACCAAATGGTTCGACACCAACTACCATTACATTGTACCTGAACTAGGCCCTCATATGAGGTTCTCTTATGCGTCTCACAAGGCAGTGGATGAATTCAAAGAGGCCAAAGCTCTTGGAGTGGATACCGTACCTGTCCTTATAGGACCTGTGTCGTACTTGTTGCTATCGAAACCAGCTAGAGGAATTGAACAATGTTTTTCCCCCCTCTCCCTAATTGGCTATATTCTTCCGGTTTACAAGGAGGTTGTGGCTGAACTGAAGGCAGCTGGTGCTAAATGGGTCCAGTTTGATGAGCCCACCCTTGTATGGGATCTTGATGCCGACCAATTGCAAGCATTTACGCATGCCTACTCAGAGCTAGAGTCATCTTTATCTGGTTTGAATGTTCTGATTGAGACATACTTTGCTGATGTAACAGCTGACAACTACAGGACACTCACCTCTTTGAAGGGTGTTACTGGTTATGGGTTTGACCTGGTTCGTGGAGCAAAGACCCTTGAATTGATTAAGGATGGATTCCCTTCTGGAAAACAACTCTTTGCTGGAGTGGTTGATGGAAGGAATATATGGGCCAATGATCTTGCATCTTCCCTTGGTACCTTGCAGGACCTTGAGGACATTGTTGGAAAAGATAAGATTGTGGTCTCTACATCCTGCTCTCTTCTCCACACTGCAGTTGATCTAGTGAATGAGACTAAGTTAGATAAAGATATAAAATCATGGCTTGCATTTGCAGCCCAAAAAGTTGATGAAGTAAATGCCTTGGCTAATGCATTATCCGGACAAAAAGATGAGGCACTTTTCTCTGCCAATGCTGCAGCTCATGCTTCAAGAAAATCCTCTCCAATGGTGACAAATGAGGCTGTCCAGAAGGCTGCTGCTGCTTTGGATGTCTCTGAGCAGCGTCGGGGCACAGATGTGGGTGGCAGGCTGGATACTCAGCGAAAGAAGCTGAACCTTCCTATTCTTCCAACAACCACCATTGGATCTTTCCCTCAGACGATGGATATTAGACGAGTGCGCCGGGAGTACAAGGATAAGAAACTCTCGCTGGAAGATTATGTCAATGCAATCAAGGAGGAAATTAACAAAGTTGTCAAGCTCCAGGAAGAGCTGGACATTGATGTGTTGGTACATGGAGAACCCGAGAGGAATGACATGGTTGAGTATTTTGGAGAACAATTATCTGGTTTTGCCTTCACTTCCAATGGGTGGGTCCAATCCTATGGTTCCCGTTATGTCAAGCCACCTATTATATATGGTGATGTGAGCCGACCCAAACCCATGACAGTTTTCTGGTCTTCACTGGCTCAGGGTATGACAAAGAAACCGATGAAGGGAATGCTCACTGGACCAGTTACAATTATGAACTGGTCTTTCGTGAGAAACGACCAACCCCGATTTGAGACCTGCTATCAGATTGCTTTGGCCATGAAGGATGAGGTTCAGGATCTTGAGAAAGCCGGTATTACTGTGATCCAAATTGATGAACCTGCTCTAAGAGAAGGTTTACCTTTGAGGAAGGCTGAGCAGGCTTTCTATCTAGATTGGGCCGTCCGCTCCTTCAGGATAACTAACTGTACTGTTCAAGACACTACGCAGATACACACCCACATGTGCTACTCAAATTTCAATGACATCATTCACTCTATCATTGACATGGATGCCGATGTGATCACGATTGAGAACTCCAAATCAGATGAGAAGCTGCTATCAGTCCTCCCTGAGGGAGTACAATTTGGTTCTGGCATTGGTCCTGGTGTTTATGATGTTCACTCACCAAGGATCCCATCTGACAAAGAAATTCGTGACAAGATTAAGAATATCGTTAAGGTCCTTGAAAACAACAATGTCTGGGTTAACCCAGACTGCGGTCTCAAGACACGCAAGTACTCTGAAGTACGGCCTGCGCTCAGCAATATGGTTGCTGCTGCCAAGTACAATCGGGAGATGTTGGCAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

806

Amino Acids

90.04

Weight (kDa)

6.15

Isoelectric Point (pI)

32.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Meth_synt_1 PF08267 46 - 359 4.4e-118 Cobalamin-independent synthase, N-terminal domain
Meth_synt_2 PF01717 475 - 798 4e-157 Cobalamin-independent synthase, Catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 236, 1874, 1957
Acc65I GGTACC 1 cut(s) 1052
AccB1I GGYRCC 1 cut(s) 1052
AccB7I CCANNNNNTGG 1 cut(s) 1668
AccBSI CCGCTC 1 cut(s) 2016
AccII CGCG 1 cut(s) 387
AccIII TCCGGA 1 cut(s) 1235
AciI CCGC 4 cut(s) 157, 345, 2014, 2328
AclWI GGATC 6 cut(s) 774, 1450, 1914, 1927, 2236, 2249
AcoI YGGCCR 2 cut(s) 276, 1884
AcsI RAATTY 3 cut(s) 548, 2083, 2259
AcuI CTGAAG 3 cut(s) 734, 2005, 2373
AcyI GRCGYC 1 cut(s) 282
AflIII ACRYGT 1 cut(s) 2070
AhlI ACTAGT 1 cut(s) 215
AjnI CCWGG 3 cut(s) 930, 1560, 2212
AleI CACNNNNGTG 1 cut(s) 1373
Alw21I GWGCWC 1 cut(s) 180
Alw26I GTCTC 8 cut(s) 398, 534, 845, 1105, 1142, 1354, 1856, 2336
AlwI GGATC 6 cut(s) 774, 1450, 1914, 1927, 2236, 2249
Ama87I CYCGRG 1 cut(s) 1601
Aor13HI TCCGGA 1 cut(s) 1235
AoxI GGCC 9 cut(s) 29, 234, 276, 502, 558, 1026, 1884, 2007, 2360
ApoI RAATTY 3 cut(s) 548, 2083, 2259
Asp718I GGTACC 1 cut(s) 1052
AspLEI GCGC 2 cut(s) 1479, 2368
AsuC2I CCSGG 1 cut(s) 1481
AsuHPI GGTGA 4 cut(s) 886, 1318, 1730, 2226
AvaI CYCGRG 1 cut(s) 1601
AvaII GGWCC 8 cut(s) 164, 599, 736, 1063, 1672, 1808, 2210, 2290
AxyI CCTNAGG 1 cut(s) 2181
BaeGI GKGCMC 1 cut(s) 1370
BalI TGGCCA 1 cut(s) 1886
BamHI GGATCC 1 cut(s) 2241
BanI GGYRCC 1 cut(s) 1052
BanII GRGCYC 2 cut(s) 180, 753
BbsI GAAGAC 1 cut(s) 1749
Bbv12I GWGCWC 1 cut(s) 180
BccI CCATC 5 cut(s) 200, 962, 1004, 1453, 2254
BceAI ACGGC 4 cut(s) 55, 221, 1994, 2375
BciT130I CCWGG 3 cut(s) 932, 1562, 2214
BciVI GTATCC 2 cut(s) 571, 1384
BclI TGATCA 2 cut(s) 325, 2130
BcnI CCSGG 1 cut(s) 1481
BcoDI GTCTC 8 cut(s) 398, 534, 845, 1105, 1142, 1354, 1856, 2336
BcuI ACTAGT 1 cut(s) 215
BfaI CTAG 9 cut(s) 216, 335, 369, 423, 500, 633, 815, 1139, 2000
BfmI CTRYAG 4 cut(s) 243, 883, 1128, 1272
BfuAI ACCTGC 3 cut(s) 236, 1874, 1957
BfuI GTATCC 2 cut(s) 571, 1384
BlpI GCTNAGC 2 cut(s) 1983, 2369
BmcAI AGTACT 1 cut(s) 2348
Bme1390I CCNGG 4 cut(s) 932, 1481, 1562, 2214
Bme18I GGWCC 8 cut(s) 164, 599, 736, 1063, 1672, 1808, 2210, 2290
BmeT110I CYCGRG 1 cut(s) 1601
BmiI GGNNCC 6 cut(s) 166, 737, 1054, 1673, 1687, 2243
BmrFI CCNGG 4 cut(s) 932, 1481, 1562, 2214
BmrI ACTGGG 1 cut(s) 127
BmsI GCATC 6 cut(s) 95, 137, 321, 763, 1049, 2110
BmuI ACTGGG 1 cut(s) 127
BoxI GACNNNNGTC 2 cut(s) 604, 2328
BpiI GAAGAC 1 cut(s) 1749
BpmI CTGGAG 2 cut(s) 1020, 1544
Bpu10I CCTNAGC 1 cut(s) 1767
Bpu1102I GCTNAGC 2 cut(s) 1983, 2369
BpuEI CTTGAG 4 cut(s) 164, 1088, 1931, 2318
BpuMI CCSGG 1 cut(s) 1481
BsaHI GRCGYC 1 cut(s) 282
BsaI GGTCTC 3 cut(s) 1105, 1856, 2336
BsaJI CCNNGG 5 cut(s) 237, 417, 1048, 1218, 2237
BsaWI WCCGGW 3 cut(s) 63, 685, 1235
Bse118I RCCGGY 2 cut(s) 284, 1919
Bse1I ACTGG 7 cut(s) 133, 739, 919, 1767, 1810, 1811, 1832
Bse21I CCTNAGG 1 cut(s) 2181
Bse3DI GCAATG 1 cut(s) 129
BseAI TCCGGA 1 cut(s) 1235
BseBI CCWGG 3 cut(s) 932, 1562, 2214
BseDI CCNNGG 5 cut(s) 237, 417, 1048, 1218, 2237
BseGI GGATG 9 cut(s) 128, 211, 257, 550, 973, 1106, 1351, 1900, 2125
BseMI GCAATG 1 cut(s) 129
BseMII CTCAG 9 cut(s) 69, 822, 1344, 1409, 1466, 1781, 1974, 2172, 2383
BseNI ACTGG 7 cut(s) 133, 739, 919, 1767, 1810, 1811, 1832
BseRI GAGGAG 1 cut(s) 83
BseSI GKGCMC 1 cut(s) 1370
Bsh1236I CGCG 1 cut(s) 387
BshFI GGCC 9 cut(s) 31, 236, 278, 504, 560, 1028, 1886, 2009, 2362
BshNI GGYRCC 1 cut(s) 1052
BsiHKAI GWGCWC 1 cut(s) 180
BsiHKCI CYCGRG 1 cut(s) 1601
BsiSI CCGG 7 cut(s) 28, 64, 285, 686, 1236, 1480, 1920
BslFI GGGAC 1 cut(s) 121
BsmAI GTCTC 8 cut(s) 398, 534, 845, 1105, 1142, 1354, 1856, 2336
BsmBI CGTCTC 1 cut(s) 534
BsmFI GGGAC 1 cut(s) 121
BsmI GAATGC 1 cut(s) 1803
BsnI GGCC 9 cut(s) 31, 236, 278, 504, 560, 1028, 1886, 2009, 2362
Bso31I GGTCTC 3 cut(s) 1105, 1856, 2336
BsoBI CYCGRG 1 cut(s) 1601
Bsp1286I GDGCHC 3 cut(s) 180, 753, 1370
Bsp13I TCCGGA 1 cut(s) 1235
Bsp143I GATC 9 cut(s) 325, 766, 1033, 1135, 1442, 1906, 1932, 2130, 2241
Bsp1720I GCTNAGC 2 cut(s) 1983, 2369
Bsp19I CCATGG 1 cut(s) 417
BspACI CCGC 4 cut(s) 157, 345, 2014, 2328
BspANI GGCC 9 cut(s) 31, 236, 278, 504, 560, 1028, 1886, 2009, 2362
BspCNI CTCAG 9 cut(s) 68, 821, 1345, 1408, 1465, 1780, 1975, 2173, 2382
BspEI TCCGGA 1 cut(s) 1235
BspFNI CGCG 1 cut(s) 387
BspLI GGNNCC 6 cut(s) 166, 737, 1054, 1673, 1687, 2243
BspMAI CTGCAG 3 cut(s) 247, 1132, 1276
BspMI ACCTGC 3 cut(s) 236, 1874, 1957
BspPI GGATC 6 cut(s) 774, 1450, 1914, 1927, 2236, 2249
BspQI GCTCTTC 1 cut(s) 1560
BspT107I GGYRCC 1 cut(s) 1052
BspTNI GGTCTC 3 cut(s) 1105, 1856, 2336
BsrBI CCGCTC 1 cut(s) 2016
BsrDI GCAATG 1 cut(s) 129
BsrFI RCCGGY 2 cut(s) 284, 1919
BsrI ACTGG 7 cut(s) 133, 739, 919, 1767, 1810, 1811, 1832
BssAI RCCGGY 2 cut(s) 284, 1919
BssECI CCNNGG 5 cut(s) 237, 417, 1048, 1218, 2237
BssMI GATC 9 cut(s) 325, 766, 1033, 1135, 1442, 1906, 1932, 2130, 2241
BssNI GRCGYC 1 cut(s) 282
BssT1I CCWWGG 4 cut(s) 417, 1048, 1218, 2237
Bst2UI CCWGG 3 cut(s) 932, 1562, 2214
Bst4CI ACNGT 5 cut(s) 583, 1747, 1930, 2036, 2041
Bst6I CTCTTC 2 cut(s) 1122, 1560
BstACI GRCGYC 1 cut(s) 282
BstAPI GCANNNNNTGC 2 cut(s) 725, 1280
BstC8I GCNNGC 7 cut(s) 276, 789, 801, 1182, 1385, 1989, 2364
BstDSI CCRYGG 2 cut(s) 237, 417
BstENI CCTNNNNNAGG 2 cut(s) 498, 2180
BstF5I GGATG 9 cut(s) 128, 211, 257, 550, 973, 1106, 1351, 1900, 2125
BstFNI CGCG 1 cut(s) 387
BstHHI GCGC 2 cut(s) 1479, 2368
BstKTI GATC 9 cut(s) 328, 769, 1036, 1138, 1445, 1909, 1935, 2133, 2244
BstMAI GTCTC 8 cut(s) 398, 534, 845, 1105, 1142, 1354, 1856, 2336
BstMBI GATC 9 cut(s) 325, 766, 1033, 1135, 1442, 1906, 1932, 2130, 2241
BstMWI GCNNNNNNNGC 8 cut(s) 242, 725, 1190, 1271, 1280, 1337, 1405, 1988
BstNI CCWGG 3 cut(s) 932, 1562, 2214
BstNSI RCATGY 2 cut(s) 803, 2074
BstPAI GACNNNNGTC 2 cut(s) 604, 2328
BstSCI CCNGG 4 cut(s) 930, 1479, 1560, 2212
BstSFI CTRYAG 4 cut(s) 243, 883, 1128, 1272
BstSLI GKGCMC 1 cut(s) 1370
BstUI CGCG 1 cut(s) 387
BstV2I GAAGAC 1 cut(s) 1749
BstX2I RGATCY 4 cut(s) 766, 1442, 1906, 2241
BstXI CCANNNNNNTGG 3 cut(s) 124, 146, 1682
BstYI RGATCY 4 cut(s) 766, 1442, 1906, 2241
Bsu36I CCTNAGG 1 cut(s) 2181
BsuI GTATCC 2 cut(s) 571, 1384
BsuRI GGCC 9 cut(s) 31, 236, 278, 504, 560, 1028, 1886, 2009, 2362
BtgI CCRYGG 2 cut(s) 237, 417
BtsCI GGATG 9 cut(s) 128, 211, 257, 550, 973, 1106, 1351, 1900, 2125
BtsI GCAGTG 2 cut(s) 546, 1125
BtsIMutI CAGTG 4 cut(s) 546, 1125, 1760, 1803
BveI ACCTGC 3 cut(s) 236, 1874, 1957
Cac8I GCNNGC 7 cut(s) 276, 789, 801, 1182, 1385, 1989, 2364
CfoI GCGC 2 cut(s) 1479, 2368
Cfr10I RCCGGY 2 cut(s) 284, 1919
CseI GACGC 3 cut(s) 290, 516, 1349
CsiI ACCWGGT 1 cut(s) 930
DpnI GATC 9 cut(s) 327, 768, 1035, 1137, 1444, 1908, 1934, 2132, 2243
DpnII GATC 9 cut(s) 325, 766, 1033, 1135, 1442, 1906, 1932, 2130, 2241
EaeI YGGCCR 2 cut(s) 276, 1884
Eam1104I CTCTTC 2 cut(s) 1122, 1560
EarI CTCTTC 2 cut(s) 1122, 1560
Ecl136II GAGCTC 1 cut(s) 178
Eco130I CCWWGG 4 cut(s) 417, 1048, 1218, 2237
Eco24I GRGCYC 2 cut(s) 180, 753
Eco31I GGTCTC 3 cut(s) 1105, 1856, 2336
Eco47I GGWCC 8 cut(s) 164, 599, 736, 1063, 1672, 1808, 2210, 2290
Eco53kI GAGCTC 1 cut(s) 178
Eco57I CTGAAG 3 cut(s) 734, 2005, 2373
Eco81I CCTNAGG 1 cut(s) 2181
Eco88I CYCGRG 1 cut(s) 1601
EcoICRI GAGCTC 1 cut(s) 178
EcoNI CCTNNNNNAGG 2 cut(s) 498, 2180
EcoO109I RGGNCCY 5 cut(s) 164, 503, 599, 1063, 2290
EcoRI GAATTC 1 cut(s) 548
EcoRII CCWGG 3 cut(s) 930, 1560, 2212
EcoT14I CCWWGG 4 cut(s) 417, 1048, 1218, 2237
EcoT22I ATGCAT 1 cut(s) 1231
EcoT38I GRGCYC 2 cut(s) 180, 753
ErhI CCWWGG 4 cut(s) 417, 1048, 1218, 2237
Esp3I CGTCTC 1 cut(s) 534
FaqI GGGAC 1 cut(s) 121
FauI CCCGC 1 cut(s) 164
FauNDI CATATG 1 cut(s) 510
FbaI TGATCA 2 cut(s) 325, 2130
FokI GGATG 9 cut(s) 115, 218, 244, 557, 980, 1093, 1358, 1907, 2132
FriOI GRGCYC 2 cut(s) 180, 753
FspBI CTAG 9 cut(s) 216, 335, 369, 423, 500, 633, 815, 1139, 2000
GlaI GCGC 2 cut(s) 1478, 2367
GsuI CTGGAG 2 cut(s) 1020, 1544
HaeIII GGCC 9 cut(s) 31, 236, 278, 504, 560, 1028, 1886, 2009, 2362
HapII CCGG 7 cut(s) 28, 64, 285, 686, 1236, 1480, 1920
HgaI GACGC 3 cut(s) 290, 516, 1349
HhaI GCGC 2 cut(s) 1479, 2368
Hin1I GRCGYC 1 cut(s) 282
Hin6I GCGC 2 cut(s) 1477, 2366
HinP1I GCGC 2 cut(s) 1477, 2366
HincII GTYRAC 2 cut(s) 61, 2317
HindII GTYRAC 2 cut(s) 61, 2317
HinfI GANTC 3 cut(s) 194, 818, 972
HpaI GTTAAC 2 cut(s) 61, 2317
HpaII CCGG 7 cut(s) 28, 64, 285, 686, 1236, 1480, 1920
HphI GGTGA 4 cut(s) 886, 1318, 1730, 2226
Hpy166II GTNNAC 5 cut(s) 61, 691, 1967, 2230, 2317
Hpy8I GTNNAC 5 cut(s) 61, 691, 1967, 2230, 2317
Hpy99I CGWCG 5 cut(s) 84, 227, 284, 392, 1365
HpyCH4III ACNGT 5 cut(s) 583, 1747, 1930, 2036, 2041
HpyF10VI GCNNNNNNNGC 8 cut(s) 242, 725, 1190, 1271, 1280, 1337, 1405, 1988
Hsp92I GRCGYC 1 cut(s) 282
HspAI GCGC 2 cut(s) 1477, 2366
Kpn2I TCCGGA 1 cut(s) 1235
KpnI GGTACC 1 cut(s) 1056
Ksp22I TGATCA 2 cut(s) 325, 2130
KspAI GTTAAC 2 cut(s) 61, 2317
Kzo9I GATC 9 cut(s) 325, 766, 1033, 1135, 1442, 1906, 1932, 2130, 2241
LguI GCTCTTC 1 cut(s) 1560
LmnI GCTCC 3 cut(s) 941, 1563, 2021
LweI GCATC 6 cut(s) 95, 137, 321, 763, 1049, 2110
MabI ACCWGGT 1 cut(s) 930
MaeI CTAG 9 cut(s) 216, 335, 369, 423, 500, 633, 815, 1139, 2000
MaeIII GTNAC 6 cut(s) 305, 868, 910, 1306, 1813, 2264
MalI GATC 9 cut(s) 327, 768, 1035, 1137, 1444, 1908, 1934, 2132, 2243
MbiI CCGCTC 1 cut(s) 2016
MboI GATC 9 cut(s) 325, 766, 1033, 1135, 1442, 1906, 1932, 2130, 2241
MboII GAAGA 7 cut(s) 674, 1035, 1109, 1415, 1523, 1577, 1749
MfeI CAATTG 1 cut(s) 782
MflI RGATCY 4 cut(s) 766, 1442, 1906, 2241
MhlI GDGCHC 3 cut(s) 180, 753, 1370
MlsI TGGCCA 1 cut(s) 1886
MluNI TGGCCA 1 cut(s) 1886
MlyI GAGTC 1 cut(s) 827
MmeI TCCRAC 3 cut(s) 376, 1060, 1451
Mox20I TGGCCA 1 cut(s) 1886
Mph1103I ATGCAT 1 cut(s) 1231
MroI TCCGGA 1 cut(s) 1235
MscI TGGCCA 1 cut(s) 1886
MseI TTAA 7 cut(s) 60, 291, 963, 1542, 2274, 2286, 2316
MslI CAYNNNNRTG 5 cut(s) 347, 1373, 1580, 2069, 2114
Msp20I TGGCCA 1 cut(s) 1886
MspA1I CMGCKG 3 cut(s) 274, 722, 875
MspI CCGG 7 cut(s) 28, 64, 285, 686, 1236, 1480, 1920
MspR9I CCNGG 4 cut(s) 932, 1481, 1562, 2214
MunI CAATTG 1 cut(s) 782
Mva1269I GAATGC 1 cut(s) 1803
MvaI CCWGG 3 cut(s) 932, 1562, 2214
MvnI CGCG 1 cut(s) 387
MwoI GCNNNNNNNGC 8 cut(s) 242, 725, 1190, 1271, 1280, 1337, 1405, 1988
NciI CCSGG 1 cut(s) 1481
NcoI CCATGG 1 cut(s) 417
NdeI CATATG 1 cut(s) 510
NdeII GATC 9 cut(s) 325, 766, 1033, 1135, 1442, 1906, 1932, 2130, 2241
NlaIV GGNNCC 6 cut(s) 166, 737, 1054, 1673, 1687, 2243
NmuCI GTSAC 2 cut(s) 1306, 2264
NsiI ATGCAT 1 cut(s) 1231
NspI RCATGY 2 cut(s) 803, 2074
OliI CACNNNNGTG 1 cut(s) 1373
PaeI GCATGC 1 cut(s) 803
PciI ACATGT 1 cut(s) 2070
PciSI GCTCTTC 1 cut(s) 1560
PcsI WCGNNNNNNNCGW 1 cut(s) 1842
PctI GAATGC 1 cut(s) 1803
PfeI GAWTC 2 cut(s) 194, 972
PflMI CCANNNNNTGG 1 cut(s) 1668
PfoI TCCNGGA 1 cut(s) 1560
PleI GAGTC 1 cut(s) 826
PpsI GAGTC 1 cut(s) 826
PpuMI RGGWCCY 4 cut(s) 164, 599, 1063, 2290
PscI ACATGT 1 cut(s) 2070
PshAI GACNNNNGTC 2 cut(s) 604, 2328
Psp124BI GAGCTC 1 cut(s) 180
Psp5II RGGWCCY 4 cut(s) 164, 599, 1063, 2290
Psp6I CCWGG 3 cut(s) 930, 1560, 2212
PspGI CCWGG 3 cut(s) 930, 1560, 2212
PspN4I GGNNCC 6 cut(s) 166, 737, 1054, 1673, 1687, 2243
PspPPI RGGWCCY 4 cut(s) 164, 599, 1063, 2290
PstI CTGCAG 3 cut(s) 247, 1132, 1276
PsuI RGATCY 4 cut(s) 766, 1442, 1906, 2241
PvuII CAGCTG 3 cut(s) 274, 722, 875
RseI CAYNNNNRTG 5 cut(s) 347, 1373, 1580, 2069, 2114
SacI GAGCTC 1 cut(s) 180
SapI GCTCTTC 1 cut(s) 1560
SaqAI TTAA 7 cut(s) 60, 291, 963, 1542, 2274, 2286, 2316
Sau3AI GATC 9 cut(s) 325, 766, 1033, 1135, 1442, 1906, 1932, 2130, 2241
ScaI AGTACT 1 cut(s) 2348
SchI GAGTC 1 cut(s) 827
ScrFI CCNGG 4 cut(s) 932, 1481, 1562, 2214
SduI GDGCHC 3 cut(s) 180, 753, 1370
SexAI ACCWGGT 1 cut(s) 930
SfaNI GCATC 6 cut(s) 95, 137, 321, 763, 1049, 2110
SfcI CTRYAG 4 cut(s) 243, 883, 1128, 1272
SinI GGWCC 8 cut(s) 164, 599, 736, 1063, 1672, 1808, 2210, 2290
SmiMI CAYNNNNRTG 5 cut(s) 347, 1373, 1580, 2069, 2114
SmlI CTYRAG 4 cut(s) 179, 1067, 1910, 2333
SmoI CTYRAG 4 cut(s) 179, 1067, 1910, 2333
SpeI ACTAGT 1 cut(s) 215
SphI GCATGC 1 cut(s) 803
SsiI CCGC 4 cut(s) 157, 345, 2014, 2328
SspMI CTAG 9 cut(s) 216, 335, 369, 423, 500, 633, 815, 1139, 2000
SstI GAGCTC 1 cut(s) 180
StyD4I CCNGG 4 cut(s) 930, 1479, 1560, 2212
StyI CCWWGG 4 cut(s) 417, 1048, 1218, 2237
TaaI ACNGT 5 cut(s) 583, 1747, 1930, 2036, 2041
TaqI TCGA 2 cut(s) 468, 623
TatI WGTACW 5 cut(s) 1485, 2036, 2188, 2346, 2394
TfiI GAWTC 2 cut(s) 194, 972
Tru1I TTAA 7 cut(s) 60, 291, 963, 1542, 2274, 2286, 2316
Tru9I TTAA 7 cut(s) 60, 291, 963, 1542, 2274, 2286, 2316
TscAI CASTG 4 cut(s) 546, 1132, 1767, 1810
TseFI GTSAC 2 cut(s) 1306, 2264
Tsp45I GTSAC 2 cut(s) 1306, 2264
TspDTI ATGAA 6 cut(s) 561, 1221, 1805, 1838, 1904, 1959
TspRI CASTG 4 cut(s) 546, 1132, 1767, 1810
Van91I CCANNNNNTGG 1 cut(s) 1668
VpaK11BI GGWCC 8 cut(s) 164, 599, 736, 1063, 1672, 1808, 2210, 2290
XagI CCTNNNNNAGG 2 cut(s) 498, 2180
XapI RAATTY 3 cut(s) 548, 2083, 2259
XbaI TCTAGA 1 cut(s) 1999
XceI RCATGY 2 cut(s) 803, 2074
XspI CTAG 9 cut(s) 216, 335, 369, 423, 500, 633, 815, 1139, 2000
ZrmI AGTACT 1 cut(s) 2348
Zsp2I ATGCAT 1 cut(s) 1231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.