Conserved oligomeric Golgi complex subunit
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 17 - 172 | 6.9e-17 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 241 - 310 | 5.9e-22 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_3 | PF07725 | 413 - 431 | 1e-06 | Leucine Rich Repeat |
| LRR_14 | PF23598 | 471 - 584 | 2.6e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 505 - 591 | 8.4e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 21, 404 |
| Acc65I | GGTACC | 1 cut(s) | 1197 |
| AccB1I | GGYRCC | 1 cut(s) | 1197 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 380 |
| AccII | CGCG | 1 cut(s) | 627 |
| AccIII | TCCGGA | 1 cut(s) | 1705 |
| AciI | CCGC | 2 cut(s) | 81, 919 |
| AclWI | GGATC | 1 cut(s) | 607 |
| AcoI | YGGCCR | 1 cut(s) | 493 |
| AcsI | RAATTY | 3 cut(s) | 134, 1313, 1792 |
| AcuI | CTGAAG | 3 cut(s) | 490, 1364, 1673 |
| AcvI | CACGTG | 1 cut(s) | 1141 |
| AfaI | GTAC | 3 cut(s) | 533, 1199, 1405 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 380, 670 |
| AflII | CTTAAG | 1 cut(s) | 1484 |
| AflIII | ACRYGT | 1 cut(s) | 1138 |
| AhlI | ACTAGT | 1 cut(s) | 1406 |
| AjnI | CCWGG | 1 cut(s) | 940 |
| AleI | CACNNNNGTG | 1 cut(s) | 628 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 813, 845 |
| Alw21I | GWGCWC | 3 cut(s) | 625, 847, 1760 |
| Alw26I | GTCTC | 5 cut(s) | 862, 872, 940, 1084, 1460 |
| Alw44I | GTGCAC | 1 cut(s) | 621 |
| AlwI | GGATC | 1 cut(s) | 607 |
| Ama87I | CYCGRG | 1 cut(s) | 875 |
| Aor13HI | TCCGGA | 1 cut(s) | 1705 |
| AoxI | GGCC | 1 cut(s) | 493 |
| ApaLI | GTGCAC | 1 cut(s) | 621 |
| ApeKI | GCWGC | 1 cut(s) | 1542 |
| ApoI | RAATTY | 3 cut(s) | 134, 1313, 1792 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1040, 1072 |
| AseI | ATTAAT | 2 cut(s) | 554, 1374 |
| Asp718I | GGTACC | 1 cut(s) | 1197 |
| AspS9I | GGNCC | 2 cut(s) | 661, 1810 |
| AsuC2I | CCSGG | 1 cut(s) | 1753 |
| AsuHPI | GGTGA | 4 cut(s) | 200, 395, 852, 1595 |
| AvaI | CYCGRG | 1 cut(s) | 875 |
| AvaII | GGWCC | 2 cut(s) | 661, 1810 |
| BaeGI | GKGCMC | 1 cut(s) | 625 |
| BalI | TGGCCA | 1 cut(s) | 495 |
| BanI | GGYRCC | 1 cut(s) | 1197 |
| BanII | GRGCYC | 1 cut(s) | 847 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 771, 803 |
| BbrPI | CACGTG | 1 cut(s) | 1141 |
| BbsI | GAAGAC | 1 cut(s) | 1694 |
| Bbv12I | GWGCWC | 3 cut(s) | 625, 847, 1760 |
| BbvI | GCAGC | 1 cut(s) | 1529 |
| BciT130I | CCWGG | 1 cut(s) | 942 |
| BcnI | CCSGG | 1 cut(s) | 1753 |
| BcoDI | GTCTC | 5 cut(s) | 862, 872, 940, 1084, 1460 |
| BcuI | ACTAGT | 1 cut(s) | 1406 |
| BfmI | CTRYAG | 1 cut(s) | 1005 |
| BfrI | CTTAAG | 1 cut(s) | 1484 |
| BisI | GCNGC | 2 cut(s) | 82, 1543 |
| BlpI | GCTNAGC | 1 cut(s) | 978 |
| BlsI | GCNGC | 2 cut(s) | 83, 1544 |
| Bme1390I | CCNGG | 2 cut(s) | 942, 1753 |
| Bme18I | GGWCC | 2 cut(s) | 661, 1810 |
| BmeT110I | CYCGRG | 1 cut(s) | 875 |
| BmgT120I | GGNCC | 2 cut(s) | 661, 1810 |
| BmiI | GGNNCC | 4 cut(s) | 663, 939, 1199, 1291 |
| BmrFI | CCNGG | 2 cut(s) | 942, 1753 |
| BmrI | ACTGGG | 1 cut(s) | 1330 |
| BmsI | GCATC | 4 cut(s) | 189, 406, 430, 964 |
| BmuI | ACTGGG | 1 cut(s) | 1330 |
| BpiI | GAAGAC | 1 cut(s) | 1694 |
| BpmI | CTGGAG | 1 cut(s) | 240 |
| Bpu10I | CCTNAGC | 1 cut(s) | 85 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 978 |
| BpuEI | CTTGAG | 2 cut(s) | 529, 552 |
| BpuMI | CCSGG | 1 cut(s) | 1753 |
| BsaAI | YACGTR | 1 cut(s) | 1141 |
| BsaJI | CCNNGG | 1 cut(s) | 941 |
| BsaWI | WCCGGW | 1 cut(s) | 1705 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 937, 967 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 380, 670 |
| Bse1I | ACTGG | 2 cut(s) | 496, 1336 |
| Bse3DI | GCAATG | 3 cut(s) | 99, 145, 741 |
| BseAI | TCCGGA | 1 cut(s) | 1705 |
| BseBI | CCWGG | 1 cut(s) | 942 |
| BseDI | CCNNGG | 1 cut(s) | 941 |
| BseGI | GGATG | 9 cut(s) | 10, 52, 372, 688, 799, 1197, 1217, 1228, 1427 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 380, 670 |
| BseMI | GCAATG | 3 cut(s) | 99, 145, 741 |
| BseMII | CTCAG | 6 cut(s) | 99, 307, 878, 1117, 1356, 1407 |
| BseNI | ACTGG | 2 cut(s) | 496, 1336 |
| BseRI | GAGGAG | 1 cut(s) | 1601 |
| BseSI | GKGCMC | 1 cut(s) | 625 |
| BseXI | GCAGC | 1 cut(s) | 1529 |
| BsgI | GTGCAG | 1 cut(s) | 260 |
| Bsh1236I | CGCG | 1 cut(s) | 627 |
| BshFI | GGCC | 1 cut(s) | 495 |
| BshNI | GGYRCC | 1 cut(s) | 1197 |
| BsiHKAI | GWGCWC | 3 cut(s) | 625, 847, 1760 |
| BsiHKCI | CYCGRG | 1 cut(s) | 875 |
| BsiSI | CCGG | 2 cut(s) | 1706, 1752 |
| BslFI | GGGAC | 1 cut(s) | 647 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 380, 670 |
| BsmAI | GTCTC | 5 cut(s) | 862, 872, 940, 1084, 1460 |
| BsmBI | CGTCTC | 1 cut(s) | 940 |
| BsmFI | GGGAC | 1 cut(s) | 647 |
| BsnI | GGCC | 1 cut(s) | 495 |
| BsoBI | CYCGRG | 1 cut(s) | 875 |
| Bsp1286I | GDGCHC | 3 cut(s) | 625, 847, 1760 |
| Bsp13I | TCCGGA | 1 cut(s) | 1705 |
| Bsp143I | GATC | 1 cut(s) | 599 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 978 |
| BspACI | CCGC | 2 cut(s) | 81, 919 |
| BspANI | GGCC | 1 cut(s) | 495 |
| BspCNI | CTCAG | 6 cut(s) | 98, 306, 877, 1116, 1357, 1408 |
| BspEI | TCCGGA | 1 cut(s) | 1705 |
| BspFNI | CGCG | 1 cut(s) | 627 |
| BspHI | TCATGA | 1 cut(s) | 1168 |
| BspLI | GGNNCC | 4 cut(s) | 663, 939, 1199, 1291 |
| BspPI | GGATC | 1 cut(s) | 607 |
| BspQI | GCTCTTC | 1 cut(s) | 486 |
| BspT107I | GGYRCC | 1 cut(s) | 1197 |
| BspTI | CTTAAG | 1 cut(s) | 1484 |
| BsrDI | GCAATG | 3 cut(s) | 99, 145, 741 |
| BsrI | ACTGG | 2 cut(s) | 496, 1336 |
| BssECI | CCNNGG | 1 cut(s) | 941 |
| BssMI | GATC | 1 cut(s) | 599 |
| Bst2UI | CCWGG | 1 cut(s) | 942 |
| Bst4CI | ACNGT | 4 cut(s) | 818, 856, 1130, 1158 |
| Bst6I | CTCTTC | 2 cut(s) | 486, 1082 |
| BstAFI | CTTAAG | 1 cut(s) | 1484 |
| BstBAI | YACGTR | 1 cut(s) | 1141 |
| BstC8I | GCNNGC | 5 cut(s) | 204, 625, 748, 984, 1871 |
| BstF5I | GGATG | 9 cut(s) | 10, 52, 372, 688, 799, 1197, 1217, 1228, 1427 |
| BstFNI | CGCG | 1 cut(s) | 627 |
| BstKTI | GATC | 1 cut(s) | 602 |
| BstMAI | GTCTC | 5 cut(s) | 862, 872, 940, 1084, 1460 |
| BstMBI | GATC | 1 cut(s) | 599 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 87, 983, 1108, 1597, 1657 |
| BstNI | CCWGG | 1 cut(s) | 942 |
| BstSCI | CCNGG | 2 cut(s) | 940, 1751 |
| BstSFI | CTRYAG | 1 cut(s) | 1005 |
| BstSLI | GKGCMC | 1 cut(s) | 625 |
| BstUI | CGCG | 1 cut(s) | 627 |
| BstV1I | GCAGC | 1 cut(s) | 1529 |
| BstV2I | GAAGAC | 1 cut(s) | 1694 |
| BstX2I | RGATCY | 1 cut(s) | 599 |
| BstYI | RGATCY | 1 cut(s) | 599 |
| BsuRI | GGCC | 1 cut(s) | 495 |
| BtsCI | GGATG | 9 cut(s) | 10, 52, 372, 688, 799, 1197, 1217, 1228, 1427 |
| BtsIMutI | CAGTG | 2 cut(s) | 814, 1343 |
| Cac8I | GCNNGC | 5 cut(s) | 204, 625, 748, 984, 1871 |
| CciI | TCATGA | 1 cut(s) | 1168 |
| Cfr13I | GGNCC | 2 cut(s) | 661, 1810 |
| CseI | GACGC | 2 cut(s) | 957, 1079 |
| Csp6I | GTAC | 3 cut(s) | 532, 1198, 1404 |
| CviAII | CATG | 3 cut(s) | 884, 1169, 1204 |
| CviQI | GTAC | 3 cut(s) | 532, 1198, 1404 |
| DpnI | GATC | 1 cut(s) | 601 |
| DpnII | GATC | 1 cut(s) | 599 |
| EaeI | YGGCCR | 1 cut(s) | 493 |
| Eam1104I | CTCTTC | 2 cut(s) | 486, 1082 |
| EarI | CTCTTC | 2 cut(s) | 486, 1082 |
| EciI | GGCGGA | 1 cut(s) | 908 |
| Ecl136II | GAGCTC | 1 cut(s) | 845 |
| Eco24I | GRGCYC | 1 cut(s) | 847 |
| Eco47I | GGWCC | 2 cut(s) | 661, 1810 |
| Eco53kI | GAGCTC | 1 cut(s) | 845 |
| Eco57I | CTGAAG | 3 cut(s) | 490, 1364, 1673 |
| Eco72I | CACGTG | 1 cut(s) | 1141 |
| Eco88I | CYCGRG | 1 cut(s) | 875 |
| EcoICRI | GAGCTC | 1 cut(s) | 845 |
| EcoO109I | RGGNCCY | 1 cut(s) | 661 |
| EcoRI | GAATTC | 1 cut(s) | 1313 |
| EcoRII | CCWGG | 1 cut(s) | 940 |
| EcoT38I | GRGCYC | 1 cut(s) | 847 |
| Esp3I | CGTCTC | 1 cut(s) | 940 |
| FaeI | CATG | 3 cut(s) | 887, 1172, 1207 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 195, 227 |
| FaqI | GGGAC | 1 cut(s) | 647 |
| FatI | CATG | 3 cut(s) | 883, 1168, 1203 |
| Fnu4HI | GCNGC | 2 cut(s) | 82, 1543 |
| FokI | GGATG | 9 cut(s) | 17, 59, 379, 695, 806, 1204, 1204, 1215, 1414 |
| FriOI | GRGCYC | 1 cut(s) | 847 |
| Fsp4HI | GCNGC | 2 cut(s) | 82, 1543 |
| GluI | GCNGC | 2 cut(s) | 82, 1543 |
| GsuI | CTGGAG | 1 cut(s) | 240 |
| HaeIII | GGCC | 1 cut(s) | 495 |
| HapII | CCGG | 2 cut(s) | 1706, 1752 |
| HgaI | GACGC | 2 cut(s) | 957, 1079 |
| Hin1II | CATG | 3 cut(s) | 887, 1172, 1207 |
| HincII | GTYRAC | 2 cut(s) | 838, 990 |
| HindII | GTYRAC | 2 cut(s) | 838, 990 |
| HindIII | AAGCTT | 1 cut(s) | 697 |
| HinfI | GANTC | 5 cut(s) | 222, 396, 435, 926, 1237 |
| HpaI | GTTAAC | 1 cut(s) | 990 |
| HpaII | CCGG | 2 cut(s) | 1706, 1752 |
| HphI | GGTGA | 4 cut(s) | 200, 395, 852, 1595 |
| Hpy166II | GTNNAC | 3 cut(s) | 623, 838, 990 |
| Hpy8I | GTNNAC | 3 cut(s) | 623, 838, 990 |
| Hpy99I | CGWCG | 1 cut(s) | 1852 |
| HpyAV | CCTTC | 9 cut(s) | 164, 357, 514, 652, 1013, 1280, 1391, 1777, 1823 |
| HpyCH4III | ACNGT | 4 cut(s) | 818, 856, 1130, 1158 |
| HpyCH4IV | ACGT | 3 cut(s) | 162, 1140, 1861 |
| HpyCH4V | TGCA | 9 cut(s) | 202, 241, 419, 623, 1111, 1269, 1476, 1619, 1686 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 87, 983, 1108, 1597, 1657 |
| HpySE526I | ACGT | 3 cut(s) | 162, 1140, 1861 |
| Hsp92II | CATG | 3 cut(s) | 887, 1172, 1207 |
| Kpn2I | TCCGGA | 1 cut(s) | 1705 |
| KpnI | GGTACC | 1 cut(s) | 1201 |
| KspAI | GTTAAC | 1 cut(s) | 990 |
| Kzo9I | GATC | 1 cut(s) | 599 |
| LguI | GCTCTTC | 1 cut(s) | 486 |
| LmnI | GCTCC | 3 cut(s) | 937, 1588, 1597 |
| Lsp1109I | GCAGC | 1 cut(s) | 1529 |
| LweI | GCATC | 4 cut(s) | 189, 406, 430, 964 |
| MaeII | ACGT | 3 cut(s) | 162, 1140, 1861 |
| MaeIII | GTNAC | 5 cut(s) | 269, 850, 1328, 1769, 1857 |
| MalI | GATC | 1 cut(s) | 601 |
| MboI | GATC | 1 cut(s) | 599 |
| MfeI | CAATTG | 1 cut(s) | 1641 |
| MflI | RGATCY | 1 cut(s) | 599 |
| MhlI | GDGCHC | 3 cut(s) | 625, 847, 1760 |
| MlsI | TGGCCA | 1 cut(s) | 495 |
| MluNI | TGGCCA | 1 cut(s) | 495 |
| MlyI | GAGTC | 2 cut(s) | 231, 444 |
| MmeI | TCCRAC | 3 cut(s) | 1011, 1290, 1520 |
| Mox20I | TGGCCA | 1 cut(s) | 495 |
| MroI | TCCGGA | 1 cut(s) | 1705 |
| MscI | TGGCCA | 1 cut(s) | 495 |
| MslI | CAYNNNNRTG | 6 cut(s) | 257, 628, 1116, 1143, 1190, 1508 |
| Msp20I | TGGCCA | 1 cut(s) | 495 |
| MspA1I | CMGCKG | 1 cut(s) | 1651 |
| MspCI | CTTAAG | 1 cut(s) | 1484 |
| MspI | CCGG | 2 cut(s) | 1706, 1752 |
| MspR9I | CCNGG | 2 cut(s) | 942, 1753 |
| MunI | CAATTG | 1 cut(s) | 1641 |
| MvaI | CCWGG | 1 cut(s) | 942 |
| MvnI | CGCG | 1 cut(s) | 627 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 87, 983, 1108, 1597, 1657 |
| NciI | CCSGG | 1 cut(s) | 1753 |
| NdeII | GATC | 1 cut(s) | 599 |
| NlaIII | CATG | 3 cut(s) | 887, 1172, 1207 |
| NlaIV | GGNNCC | 4 cut(s) | 663, 939, 1199, 1291 |
| NmuCI | GTSAC | 1 cut(s) | 1328 |
| OliI | CACNNNNGTG | 1 cut(s) | 628 |
| PaeR7I | CTCGAG | 1 cut(s) | 875 |
| PagI | TCATGA | 1 cut(s) | 1168 |
| PciSI | GCTCTTC | 1 cut(s) | 486 |
| PfeI | GAWTC | 3 cut(s) | 396, 926, 1237 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 380 |
| PkrI | GCNGC | 2 cut(s) | 83, 1544 |
| PleI | GAGTC | 2 cut(s) | 230, 443 |
| PmaCI | CACGTG | 1 cut(s) | 1141 |
| PmlI | CACGTG | 1 cut(s) | 1141 |
| PpsI | GAGTC | 2 cut(s) | 230, 443 |
| Ppu21I | YACGTR | 1 cut(s) | 1141 |
| PpuMI | RGGWCCY | 1 cut(s) | 661 |
| PshBI | ATTAAT | 2 cut(s) | 554, 1374 |
| PsiI | TTATAA | 2 cut(s) | 21, 404 |
| Psp124BI | GAGCTC | 1 cut(s) | 847 |
| Psp5II | RGGWCCY | 1 cut(s) | 661 |
| Psp6I | CCWGG | 1 cut(s) | 940 |
| PspCI | CACGTG | 1 cut(s) | 1141 |
| PspGI | CCWGG | 1 cut(s) | 940 |
| PspN4I | GGNNCC | 4 cut(s) | 663, 939, 1199, 1291 |
| PspPI | GGNCC | 2 cut(s) | 661, 1810 |
| PspPPI | RGGWCCY | 1 cut(s) | 661 |
| PsuI | RGATCY | 1 cut(s) | 599 |
| PvuII | CAGCTG | 1 cut(s) | 1651 |
| RsaI | GTAC | 3 cut(s) | 533, 1199, 1405 |
| RsaNI | GTAC | 3 cut(s) | 532, 1198, 1404 |
| RseI | CAYNNNNRTG | 6 cut(s) | 257, 628, 1116, 1143, 1190, 1508 |
| SacI | GAGCTC | 1 cut(s) | 847 |
| SapI | GCTCTTC | 1 cut(s) | 486 |
| SatI | GCNGC | 2 cut(s) | 82, 1543 |
| Sau3AI | GATC | 1 cut(s) | 599 |
| Sau96I | GGNCC | 2 cut(s) | 661, 1810 |
| SchI | GAGTC | 2 cut(s) | 231, 444 |
| ScrFI | CCNGG | 2 cut(s) | 942, 1753 |
| SduI | GDGCHC | 3 cut(s) | 625, 847, 1760 |
| SfaNI | GCATC | 4 cut(s) | 189, 406, 430, 964 |
| SfcI | CTRYAG | 1 cut(s) | 1005 |
| Sfr274I | CTCGAG | 1 cut(s) | 875 |
| SinI | GGWCC | 2 cut(s) | 661, 1810 |
| SlaI | CTCGAG | 1 cut(s) | 875 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 257, 628, 1116, 1143, 1190, 1508 |
| SmlI | CTYRAG | 4 cut(s) | 544, 567, 875, 1484 |
| SmoI | CTYRAG | 4 cut(s) | 544, 567, 875, 1484 |
| SpeI | ACTAGT | 1 cut(s) | 1406 |
| SsiI | CCGC | 2 cut(s) | 81, 919 |
| SspI | AATATT | 1 cut(s) | 871 |
| SstI | GAGCTC | 1 cut(s) | 847 |
| StyD4I | CCNGG | 2 cut(s) | 940, 1751 |
| TaaI | ACNGT | 4 cut(s) | 818, 856, 1130, 1158 |
| TaiI | ACGT | 3 cut(s) | 165, 1143, 1864 |
| TaqI | TCGA | 3 cut(s) | 438, 609, 876 |
| TatI | WGTACW | 2 cut(s) | 531, 1403 |
| TauI | GCSGC | 1 cut(s) | 84 |
| TfiI | GAWTC | 3 cut(s) | 396, 926, 1237 |
| TscAI | CASTG | 2 cut(s) | 821, 1343 |
| TseFI | GTSAC | 1 cut(s) | 1328 |
| TseI | GCWGC | 1 cut(s) | 1542 |
| Tsp45I | GTSAC | 1 cut(s) | 1328 |
| TspDTI | ATGAA | 9 cut(s) | 194, 383, 984, 1100, 1185, 1217, 1220, 1306, 1526 |
| TspGWI | ACGGA | 1 cut(s) | 29 |
| TspRI | CASTG | 2 cut(s) | 821, 1343 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 380 |
| Vha464I | CTTAAG | 1 cut(s) | 1484 |
| VneI | GTGCAC | 1 cut(s) | 621 |
| VpaK11BI | GGWCC | 2 cut(s) | 661, 1810 |
| VspI | ATTAAT | 2 cut(s) | 554, 1374 |
| XapI | RAATTY | 3 cut(s) | 134, 1313, 1792 |
| XbaI | TCTAGA | 1 cut(s) | 736 |
| XhoI | CTCGAG | 1 cut(s) | 875 |