TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 10 - 159 | 1.2e-17 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 141 |
| AcsI | RAATTY | 3 cut(s) | 42, 103, 377 |
| AcuI | CTGAAG | 1 cut(s) | 63 |
| AfaI | GTAC | 3 cut(s) | 202, 309, 444 |
| AflII | CTTAAG | 1 cut(s) | 278 |
| AflIII | ACRYGT | 1 cut(s) | 291 |
| AgsI | TTSAA | 3 cut(s) | 58, 157, 544 |
| AjnI | CCWGG | 1 cut(s) | 31 |
| AleI | CACNNNNGTG | 1 cut(s) | 431 |
| AluBI | AGCT | 4 cut(s) | 188, 521, 540, 571 |
| AluI | AGCT | 4 cut(s) | 188, 521, 540, 571 |
| Alw26I | GTCTC | 1 cut(s) | 30 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 86 |
| Ama87I | CYCGRG | 1 cut(s) | 643 |
| ApeKI | GCWGC | 2 cut(s) | 437, 521 |
| ApoI | RAATTY | 3 cut(s) | 42, 103, 377 |
| AsuHPI | GGTGA | 2 cut(s) | 574, 686 |
| AvaI | CYCGRG | 1 cut(s) | 643 |
| BbsI | GAAGAC | 1 cut(s) | 69 |
| BbvI | GCAGC | 2 cut(s) | 449, 508 |
| BccI | CCATC | 1 cut(s) | 695 |
| BceAI | ACGGC | 1 cut(s) | 444 |
| BciT130I | CCWGG | 1 cut(s) | 33 |
| BcoDI | GTCTC | 1 cut(s) | 30 |
| BfaI | CTAG | 2 cut(s) | 177, 531 |
| BfmI | CTRYAG | 2 cut(s) | 69, 226 |
| BfrI | CTTAAG | 1 cut(s) | 278 |
| BisI | GCNGC | 2 cut(s) | 438, 522 |
| BlsI | GCNGC | 2 cut(s) | 439, 523 |
| Bme1390I | CCNGG | 1 cut(s) | 33 |
| BmeT110I | CYCGRG | 1 cut(s) | 643 |
| BmrFI | CCNGG | 1 cut(s) | 33 |
| BmsI | GCATC | 4 cut(s) | 182, 465, 539, 665 |
| BpiI | GAAGAC | 1 cut(s) | 69 |
| BpmI | CTGGAG | 1 cut(s) | 532 |
| BsaJI | CCNNGG | 4 cut(s) | 298, 311, 426, 670 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 333, 363 |
| Bse1I | ACTGG | 2 cut(s) | 150, 347 |
| BseBI | CCWGG | 1 cut(s) | 33 |
| BseDI | CCNNGG | 4 cut(s) | 298, 311, 426, 670 |
| BseGI | GGATG | 1 cut(s) | 554 |
| BseMII | CTCAG | 2 cut(s) | 360, 563 |
| BseNI | ACTGG | 2 cut(s) | 150, 347 |
| BseRI | GAGGAG | 2 cut(s) | 550, 608 |
| BseXI | GCAGC | 2 cut(s) | 449, 508 |
| BsiHKCI | CYCGRG | 1 cut(s) | 643 |
| BslFI | GGGAC | 1 cut(s) | 643 |
| BsmAI | GTCTC | 1 cut(s) | 30 |
| BsmFI | GGGAC | 1 cut(s) | 643 |
| BsoBI | CYCGRG | 1 cut(s) | 643 |
| Bsp143I | GATC | 1 cut(s) | 496 |
| Bsp19I | CCATGG | 1 cut(s) | 311 |
| BspACI | CCGC | 1 cut(s) | 141 |
| BspCNI | CTCAG | 2 cut(s) | 361, 564 |
| BspHI | TCATGA | 1 cut(s) | 493 |
| BspTI | CTTAAG | 1 cut(s) | 278 |
| BsrI | ACTGG | 2 cut(s) | 150, 347 |
| BssECI | CCNNGG | 4 cut(s) | 298, 311, 426, 670 |
| BssMI | GATC | 1 cut(s) | 496 |
| BssT1I | CCWWGG | 3 cut(s) | 298, 311, 670 |
| Bst2UI | CCWGG | 1 cut(s) | 33 |
| Bst4CI | ACNGT | 2 cut(s) | 88, 230 |
| Bst6I | CTCTTC | 1 cut(s) | 33 |
| BstAFI | CTTAAG | 1 cut(s) | 278 |
| BstDEI | CTNAG | 2 cut(s) | 369, 572 |
| BstDSI | CCRYGG | 2 cut(s) | 311, 426 |
| BstF5I | GGATG | 1 cut(s) | 554 |
| BstKTI | GATC | 1 cut(s) | 499 |
| BstMAI | GTCTC | 1 cut(s) | 30 |
| BstMBI | GATC | 1 cut(s) | 496 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 352, 437 |
| BstNI | CCWGG | 1 cut(s) | 33 |
| BstNSI | RCATGY | 1 cut(s) | 295 |
| BstSCI | CCNGG | 1 cut(s) | 31 |
| BstSFI | CTRYAG | 2 cut(s) | 69, 226 |
| BstV1I | GCAGC | 2 cut(s) | 449, 508 |
| BstV2I | GAAGAC | 1 cut(s) | 69 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 433 |
| BtgI | CCRYGG | 2 cut(s) | 311, 426 |
| BtsCI | GGATG | 1 cut(s) | 554 |
| BtsI | GCAGTG | 1 cut(s) | 438 |
| BtsIMutI | CAGTG | 3 cut(s) | 366, 438, 705 |
| CaiI | CAGNNNCTG | 1 cut(s) | 86 |
| CciI | TCATGA | 1 cut(s) | 493 |
| Csp6I | GTAC | 3 cut(s) | 201, 308, 443 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 87, 122, 448, 483 |
| CviAII | CATG | 4 cut(s) | 292, 312, 413, 494 |
| CviJI | RGCY | 8 cut(s) | 129, 188, 346, 374, 425, 521, 540, 571 |
| CviKI_1 | RGCY | 8 cut(s) | 129, 188, 346, 374, 425, 521, 540, 571 |
| CviQI | GTAC | 3 cut(s) | 201, 308, 443 |
| DdeI | CTNAG | 2 cut(s) | 369, 572 |
| DpnI | GATC | 1 cut(s) | 498 |
| DpnII | GATC | 1 cut(s) | 496 |
| Eam1104I | CTCTTC | 1 cut(s) | 33 |
| EarI | CTCTTC | 1 cut(s) | 33 |
| Eco130I | CCWWGG | 3 cut(s) | 298, 311, 670 |
| Eco57I | CTGAAG | 1 cut(s) | 63 |
| Eco88I | CYCGRG | 1 cut(s) | 643 |
| EcoRII | CCWGG | 1 cut(s) | 31 |
| EcoT14I | CCWWGG | 3 cut(s) | 298, 311, 670 |
| EcoT22I | ATGCAT | 2 cut(s) | 175, 658 |
| ErhI | CCWWGG | 3 cut(s) | 298, 311, 670 |
| FaeI | CATG | 4 cut(s) | 295, 315, 416, 497 |
| FaqI | GGGAC | 1 cut(s) | 643 |
| FatI | CATG | 4 cut(s) | 291, 311, 412, 493 |
| Fnu4HI | GCNGC | 2 cut(s) | 438, 522 |
| FokI | GGATG | 1 cut(s) | 561 |
| Fsp4HI | GCNGC | 2 cut(s) | 438, 522 |
| FspBI | CTAG | 2 cut(s) | 177, 531 |
| GluI | GCNGC | 2 cut(s) | 438, 522 |
| GsuI | CTGGAG | 1 cut(s) | 532 |
| Hin1II | CATG | 4 cut(s) | 295, 315, 416, 497 |
| HinfI | GANTC | 1 cut(s) | 273 |
| HphI | GGTGA | 2 cut(s) | 574, 686 |
| Hpy166II | GTNNAC | 1 cut(s) | 677 |
| Hpy188I | TCNGA | 4 cut(s) | 319, 607, 661, 691 |
| Hpy188III | TCNNGA | 5 cut(s) | 47, 177, 494, 511, 645 |
| Hpy8I | GTNNAC | 1 cut(s) | 677 |
| HpyAV | CCTTC | 1 cut(s) | 214 |
| HpyCH4III | ACNGT | 2 cut(s) | 88, 230 |
| HpyCH4V | TGCA | 5 cut(s) | 173, 412, 456, 504, 656 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 352, 437 |
| HpyF3I | CTNAG | 2 cut(s) | 369, 572 |
| Hsp92II | CATG | 4 cut(s) | 295, 315, 416, 497 |
| Kzo9I | GATC | 1 cut(s) | 496 |
| LmnI | GCTCC | 2 cut(s) | 537, 557 |
| LpnPI | CCDG | 6 cut(s) | 18, 45, 60, 163, 360, 496 |
| Lsp1109I | GCAGC | 2 cut(s) | 449, 508 |
| LweI | GCATC | 4 cut(s) | 182, 465, 539, 665 |
| MaeI | CTAG | 2 cut(s) | 177, 531 |
| MaeIII | GTNAC | 1 cut(s) | 82 |
| MalI | GATC | 1 cut(s) | 498 |
| MboI | GATC | 1 cut(s) | 496 |
| MboII | GAAGA | 3 cut(s) | 20, 69, 675 |
| MluCI | AATT | 6 cut(s) | 42, 103, 377, 526, 598, 696 |
| MnlI | CCTC | 4 cut(s) | 18, 364, 528, 586 |
| Mph1103I | ATGCAT | 2 cut(s) | 175, 658 |
| MseI | TTAA | 3 cut(s) | 279, 333, 381 |
| MslI | CAYNNNNRTG | 2 cut(s) | 431, 624 |
| MspCI | CTTAAG | 1 cut(s) | 278 |
| MspR9I | CCNGG | 1 cut(s) | 33 |
| MvaI | CCWGG | 1 cut(s) | 33 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 352, 437 |
| NcoI | CCATGG | 1 cut(s) | 311 |
| NdeII | GATC | 1 cut(s) | 496 |
| NlaIII | CATG | 4 cut(s) | 295, 315, 416, 497 |
| NsiI | ATGCAT | 2 cut(s) | 175, 658 |
| NspI | RCATGY | 1 cut(s) | 295 |
| OliI | CACNNNNGTG | 1 cut(s) | 431 |
| PaeR7I | CTCGAG | 1 cut(s) | 643 |
| PagI | TCATGA | 1 cut(s) | 493 |
| PciI | ACATGT | 1 cut(s) | 291 |
| PfeI | GAWTC | 1 cut(s) | 273 |
| PfoI | TCCNGGA | 1 cut(s) | 31 |
| PkrI | GCNGC | 2 cut(s) | 439, 523 |
| PscI | ACATGT | 1 cut(s) | 291 |
| Psp6I | CCWGG | 1 cut(s) | 31 |
| PspGI | CCWGG | 1 cut(s) | 31 |
| PstNI | CAGNNNCTG | 1 cut(s) | 86 |
| RsaI | GTAC | 3 cut(s) | 202, 309, 444 |
| RsaNI | GTAC | 3 cut(s) | 201, 308, 443 |
| RseI | CAYNNNNRTG | 2 cut(s) | 431, 624 |
| SaqAI | TTAA | 3 cut(s) | 279, 333, 381 |
| SatI | GCNGC | 2 cut(s) | 438, 522 |
| Sau3AI | GATC | 1 cut(s) | 496 |
| ScrFI | CCNGG | 1 cut(s) | 33 |
| SetI | ASST | 8 cut(s) | 10, 190, 206, 523, 542, 573, 587, 676 |
| SfaNI | GCATC | 4 cut(s) | 182, 465, 539, 665 |
| SfcI | CTRYAG | 2 cut(s) | 69, 226 |
| Sfr274I | CTCGAG | 1 cut(s) | 643 |
| SlaI | CTCGAG | 1 cut(s) | 643 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 431, 624 |
| SmlI | CTYRAG | 2 cut(s) | 278, 643 |
| SmoI | CTYRAG | 2 cut(s) | 278, 643 |
| Sse9I | AATT | 6 cut(s) | 42, 103, 377, 526, 598, 696 |
| SsiI | CCGC | 1 cut(s) | 141 |
| SspI | AATATT | 1 cut(s) | 385 |
| SspMI | CTAG | 2 cut(s) | 177, 531 |
| StyD4I | CCNGG | 1 cut(s) | 31 |
| StyI | CCWWGG | 3 cut(s) | 298, 311, 670 |
| TaaI | ACNGT | 2 cut(s) | 88, 230 |
| TaqI | TCGA | 1 cut(s) | 644 |
| TasI | AATT | 6 cut(s) | 42, 103, 377, 526, 598, 696 |
| TatI | WGTACW | 1 cut(s) | 442 |
| TfiI | GAWTC | 1 cut(s) | 273 |
| Tru1I | TTAA | 3 cut(s) | 279, 333, 381 |
| Tru9I | TTAA | 3 cut(s) | 279, 333, 381 |
| TscAI | CASTG | 3 cut(s) | 373, 438, 712 |
| TseI | GCWGC | 2 cut(s) | 437, 521 |
| TspDTI | ATGAA | 4 cut(s) | 196, 407, 414, 675 |
| TspRI | CASTG | 3 cut(s) | 373, 438, 712 |
| Vha464I | CTTAAG | 1 cut(s) | 278 |
| XapI | RAATTY | 3 cut(s) | 42, 103, 377 |
| XbaI | TCTAGA | 1 cut(s) | 176 |
| XceI | RCATGY | 1 cut(s) | 295 |
| XhoI | CTCGAG | 1 cut(s) | 643 |
| XspI | CTAG | 2 cut(s) | 177, 531 |
| Zsp2I | ATGCAT | 2 cut(s) | 175, 658 |