Rmu_sc0002863.1_g000018

Conserved oligomeric Golgi complex subunit

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002863.1
Physical Location & Seq
Reverse (-)
66859 .. 70047
3189 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002863.1_g000018.1.cds

Sequence Viewer

Length: 2793 bp
atggagcctctactatatcctagggtggatgatggggcggattataatgatggggtggatgactgggatgattgggcggattataataatggggtggatgattgggatgattataataatggggtggatgattgggcggattataatgatgcggtggatgattgggatgatgaggtggacgattataataattggatagatgattgggcggattataatgatggggtgaatgattgggtggaggtggattataatgatggggtggatgatttggcgaattataataatgaggtagatgattgggatgatgtggtggatgattgggcgcaggcggattataatgatacggatggggtagatgattgggatgatgaggcggattataataatggagtagatgattgggcggaggcggattataataatggtatagatgattgggatgatggggtggatgattgggcggattataataatggagtagatgattgggatgatggggtggatgattgggataatgatggggtagattataataatggtgtagatgattgggatgatggggcggattataataatggagtagatgattgggcggaggcggattataataatggtgtagatgattgggatgatggagtggatgattgggcggattataataatggagtagatgattgggatgatggggtggatgattgggataatggggtagatgattgggatgatgacgtgaatgatggagcggaggcggattataatgatagggtggatgattgggataatgatggggtagatgattgggatgatagggtggatgattgggcggaggcggattataatgatagggtggatgattgcgataatgatggggtaaatgattgggcggattataataatggggtagatgattggaatgatggggtgaatgattgggcggaggcggattataatgattgggtggattctaataataggatggatgattggacggattataataatggggtagttgattgggatgatggggtggatgattggggggatggtgttcgtagtgtaggaatatggggaatgggcggctcaggcaaaacaaccattgctagagctgtatatgaccaaatatcttgtaaatttgaacaccattgctttcttcaaaacgtcagagaaggttttatgaagaaaggtgatgtattgatgcaagcagaacttctatctggagtcttgaacgaaaatgtgcagagtttaggcatattgatgagcagaggttacaatatgataatggaaaggctcagtcagaaaaaggttctgcttgttcttgatgatgtggataattttgcccaaatagaaactttgctaggaaggatgaagccttcatttggtgatggaagtagaatcattataacaactagagatgcacaatatctaagtggagtcgatgccatttattctcccaagctattacctgatgataaagctcttcaactctttggccagtatgccttcagaacaaaccaaccctctagtgagtacaatcatctctcaaggaaattaattgaatatgctcaaggtctgcctttagcacttaaagtcttgggatcttttctcgataataaaagtgcacgcgagtgggaatatgtgctagagaaaataaagaaggtcccacacagggctattcaggatgtgcttagaataagctttgatggactagacgatttagagaaggacatatttctagacattgcgtgcttcttcaaaggaaaggaaaaagactatgtagcaaaacttctggatggctgtggctttttcttccactgtggattaagagttcttgttgacagagctctcgtaactgtctcacctcagaatattctcgagacacatgatttactacggcagatgggtagggaaattgtccgccaagaatcaattaaggagccagggagacgcagtagattgtggtgttatgaagatgctaagctggcgttaactcaaaatacgactacagaagcagttgaaggcatagtgttggacttgtcttgctcaaaagaagtgtccataaacgctgacgctgttgctagaatgaagagactaagattgctcagagtgcattacgatgaggggaactgtaagcaacacgtgaatgggaacttacagtttctttctcatgaattgagttgcctcatctggatggggtaccccatgaagtctttgccatccaattttcatcccaaaaatcttgttgaacttgatatgcgtgatagttgcattgaagaactatgggaaggaaccgagaccctatctcttgaaggttgtactagtttatctgaggttcagccatccatttcagctcataaaaaacttagtctcttgttgctgaaagattgcaaggaacttaagatttttccgaccagcatagatatgaaatctctcaaaatccttaatctctctggctgctcaaaaattgaggtgtttccagatatttcagggattatggaggagctatcggagcttcacctagacaagactgcaatcagagaactaccctcatcaattgaacagctgaagaagctggtgttattagatatgagagattgcaaaagcctcttatgtcttccggacaatatctgtaatttgacataccttgaaaggctcttactagccgggtgctcacaacttcgtaacttgccagagaaggtgggaaatttgaaattgttgatggaccttcaactagaggggagtggtgtaaaacaactcccgtcgtctatgttacgtttgggcaggcttaaatag

Protein Analysis

930

Amino Acids

106.11

Weight (kDa)

4.05

Isoelectric Point (pI)

18.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 2196
AccB1I GGYRCC 1 cut(s) 2196
AccBSI CCGCTC 1 cut(s) 746
AccII CGCG 1 cut(s) 1626
AccIII TCCGGA 1 cut(s) 2617
AclWI GGATC 1 cut(s) 1606
AcoI YGGCCR 1 cut(s) 1492
AcsI RAATTY 2 cut(s) 1133, 2704
AcuI CTGAAG 2 cut(s) 1489, 2585
AcvI CACGTG 1 cut(s) 2140
AfaI GTAC 3 cut(s) 1532, 2198, 2317
AfiI CCNNNNNNNGG 2 cut(s) 1379, 1669
AflII CTTAAG 1 cut(s) 2396
AflIII ACRYGT 1 cut(s) 2137
AhlI ACTAGT 1 cut(s) 2318
AjiI CACGTC 1 cut(s) 733
AjnI CCWGG 1 cut(s) 1939
AleI CACNNNNGTG 1 cut(s) 1627
AloI GAACNNNNNNTCC 2 cut(s) 1812, 1844
Alw21I GWGCWC 3 cut(s) 1624, 1846, 2672
Alw26I GTCTC 6 cut(s) 1861, 1871, 1939, 2083, 2288, 2372
Alw44I GTGCAC 1 cut(s) 1620
AlwI GGATC 1 cut(s) 1606
Ama87I CYCGRG 1 cut(s) 1874
Aor13HI TCCGGA 1 cut(s) 2617
AoxI GGCC 1 cut(s) 1492
ApaLI GTGCAC 1 cut(s) 1620
ApeKI GCWGC 1 cut(s) 2454
ApoI RAATTY 2 cut(s) 1133, 2704
ArsI GACNNNNNNTTYG 2 cut(s) 2039, 2071
AseI ATTAAT 1 cut(s) 1553
Asp718I GGTACC 1 cut(s) 2196
AspA2I CCTAGG 1 cut(s) 20
AspLEI GCGC 1 cut(s) 328
AspS9I GGNCC 2 cut(s) 1660, 2722
AsuC2I CCSGG 1 cut(s) 2665
AsuHPI GGTGA 6 cut(s) 238, 937, 1199, 1394, 1851, 2507
AvaI CYCGRG 1 cut(s) 1874
AvaII GGWCC 2 cut(s) 1660, 2722
AvrII CCTAGG 1 cut(s) 20
BaeGI GKGCMC 1 cut(s) 1624
BalI TGGCCA 1 cut(s) 1494
BanI GGYRCC 1 cut(s) 2196
BanII GRGCYC 1 cut(s) 1846
BarI GAAGNNNNNNTAC 2 cut(s) 1770, 1802
BbrPI CACGTG 1 cut(s) 2140
BbsI GAAGAC 1 cut(s) 2606
Bbv12I GWGCWC 3 cut(s) 1624, 1846, 2672
BbvI GCAGC 1 cut(s) 2441
BceAI ACGGC 1 cut(s) 1910
BciT130I CCWGG 1 cut(s) 1941
BcnI CCSGG 1 cut(s) 2665
BcoDI GTCTC 6 cut(s) 1861, 1871, 1939, 2083, 2288, 2372
BcuI ACTAGT 1 cut(s) 2318
BfmI CTRYAG 1 cut(s) 2004
BfrI CTTAAG 1 cut(s) 2396
BisI GCNGC 2 cut(s) 1081, 2455
BlnI CCTAGG 1 cut(s) 20
BlpI GCTNAGC 1 cut(s) 1977
BlsI GCNGC 2 cut(s) 1082, 2456
Bme1390I CCNGG 2 cut(s) 1941, 2665
Bme18I GGWCC 2 cut(s) 1660, 2722
BmeT110I CYCGRG 1 cut(s) 1874
BmgBI CACGTC 1 cut(s) 733
BmgT120I GGNCC 2 cut(s) 1660, 2722
BmiI GGNNCC 5 cut(s) 6, 1662, 1938, 2198, 2290
BmrFI CCNGG 2 cut(s) 1941, 2665
BmrI ACTGGG 1 cut(s) 73
BmsI GCATC 5 cut(s) 139, 1188, 1405, 1429, 1963
BmuI ACTGGG 1 cut(s) 73
BpiI GAAGAC 1 cut(s) 2606
BpmI CTGGAG 1 cut(s) 1239
Bpu10I CCTNAGC 1 cut(s) 1084
Bpu1102I GCTNAGC 1 cut(s) 1977
BpuEI CTTGAG 2 cut(s) 1528, 1551
BpuMI CCSGG 1 cut(s) 2665
BsaAI YACGTR 1 cut(s) 2140
BsaI GGTCTC 1 cut(s) 2288
BsaJI CCNNGG 2 cut(s) 20, 1940
BsaWI WCCGGW 1 cut(s) 2617
BsaXI ACNNNNNCTCC 2 cut(s) 1936, 1966
Bsc4I CCNNNNNNNGG 2 cut(s) 1379, 1669
Bse1I ACTGG 2 cut(s) 68, 1495
Bse3DI GCAATG 3 cut(s) 1098, 1144, 1740
BseAI TCCGGA 1 cut(s) 2617
BseBI CCWGG 1 cut(s) 1941
BseDI CCNNGG 2 cut(s) 20, 1940
BseLI CCNNNNNNNGG 2 cut(s) 1379, 1669
BseMI GCAATG 3 cut(s) 1098, 1144, 1740
BseMII CTCAG 5 cut(s) 1098, 1306, 1877, 2116, 2319
BseNI ACTGG 2 cut(s) 68, 1495
BseRI GAGGAG 1 cut(s) 2513
BseSI GKGCMC 1 cut(s) 1624
BseXI GCAGC 1 cut(s) 2441
BsgI GTGCAG 1 cut(s) 1259
Bsh1236I CGCG 1 cut(s) 1626
BshFI GGCC 1 cut(s) 1494
BshNI GGYRCC 1 cut(s) 2196
BsiHKAI GWGCWC 3 cut(s) 1624, 1846, 2672
BsiHKCI CYCGRG 1 cut(s) 1874
BsiSI CCGG 2 cut(s) 2618, 2664
BslFI GGGAC 1 cut(s) 1646
BslI CCNNNNNNNGG 2 cut(s) 1379, 1669
BsmAI GTCTC 6 cut(s) 1861, 1871, 1939, 2083, 2288, 2372
BsmBI CGTCTC 1 cut(s) 1939
BsmFI GGGAC 1 cut(s) 1646
BsnI GGCC 1 cut(s) 1494
Bso31I GGTCTC 1 cut(s) 2288
BsoBI CYCGRG 1 cut(s) 1874
Bsp1286I GDGCHC 3 cut(s) 1624, 1846, 2672
Bsp13I TCCGGA 1 cut(s) 2617
Bsp143I GATC 1 cut(s) 1598
Bsp1720I GCTNAGC 1 cut(s) 1977
BspANI GGCC 1 cut(s) 1494
BspCNI CTCAG 5 cut(s) 1097, 1305, 1876, 2115, 2320
BspEI TCCGGA 1 cut(s) 2617
BspFNI CGCG 1 cut(s) 1626
BspHI TCATGA 1 cut(s) 2167
BspLI GGNNCC 5 cut(s) 6, 1662, 1938, 2198, 2290
BspPI GGATC 1 cut(s) 1606
BspQI GCTCTTC 1 cut(s) 1485
BspT107I GGYRCC 1 cut(s) 2196
BspTI CTTAAG 1 cut(s) 2396
BspTNI GGTCTC 1 cut(s) 2288
BsrBI CCGCTC 1 cut(s) 746
BsrDI GCAATG 3 cut(s) 1098, 1144, 1740
BsrI ACTGG 2 cut(s) 68, 1495
BssECI CCNNGG 2 cut(s) 20, 1940
BssMI GATC 1 cut(s) 1598
BssT1I CCWWGG 1 cut(s) 20
Bst2UI CCWGG 1 cut(s) 1941
Bst4CI ACNGT 4 cut(s) 1817, 1855, 2129, 2157
Bst6I CTCTTC 2 cut(s) 1485, 2081
BstAFI CTTAAG 1 cut(s) 2396
BstBAI YACGTR 1 cut(s) 2140
BstC8I GCNNGC 6 cut(s) 330, 1203, 1624, 1747, 1983, 2783
BstFNI CGCG 1 cut(s) 1626
BstHHI GCGC 1 cut(s) 328
BstKTI GATC 1 cut(s) 1601
BstMAI GTCTC 6 cut(s) 1861, 1871, 1939, 2083, 2288, 2372
BstMBI GATC 1 cut(s) 1598
BstMWI GCNNNNNNNGC 5 cut(s) 1086, 1982, 2107, 2509, 2569
BstNI CCWGG 1 cut(s) 1941
BstSCI CCNGG 2 cut(s) 1939, 2663
BstSFI CTRYAG 1 cut(s) 2004
BstSLI GKGCMC 1 cut(s) 1624
BstUI CGCG 1 cut(s) 1626
BstV1I GCAGC 1 cut(s) 2441
BstV2I GAAGAC 1 cut(s) 2606
BstX2I RGATCY 1 cut(s) 1598
BstYI RGATCY 1 cut(s) 1598
BsuRI GGCC 1 cut(s) 1494
BtrI CACGTC 1 cut(s) 733
BtsIMutI CAGTG 1 cut(s) 1813
Cac8I GCNNGC 6 cut(s) 330, 1203, 1624, 1747, 1983, 2783
CciI TCATGA 1 cut(s) 2167
CfoI GCGC 1 cut(s) 328
Cfr13I GGNCC 2 cut(s) 1660, 2722
CseI GACGC 2 cut(s) 1956, 2078
Csp6I GTAC 3 cut(s) 1531, 2197, 2316
CviAII CATG 3 cut(s) 1883, 2168, 2203
CviQI GTAC 3 cut(s) 1531, 2197, 2316
DpnI GATC 1 cut(s) 1600
DpnII GATC 1 cut(s) 1598
EaeI YGGCCR 1 cut(s) 1492
Eam1104I CTCTTC 2 cut(s) 1485, 2081
EarI CTCTTC 2 cut(s) 1485, 2081
Ecl136II GAGCTC 1 cut(s) 1844
Eco130I CCWWGG 1 cut(s) 20
Eco24I GRGCYC 1 cut(s) 1846
Eco31I GGTCTC 1 cut(s) 2288
Eco47I GGWCC 2 cut(s) 1660, 2722
Eco53kI GAGCTC 1 cut(s) 1844
Eco57I CTGAAG 2 cut(s) 1489, 2585
Eco72I CACGTG 1 cut(s) 2140
Eco88I CYCGRG 1 cut(s) 1874
EcoICRI GAGCTC 1 cut(s) 1844
EcoO109I RGGNCCY 1 cut(s) 1660
EcoRII CCWGG 1 cut(s) 1939
EcoT14I CCWWGG 1 cut(s) 20
EcoT38I GRGCYC 1 cut(s) 1846
ErhI CCWWGG 1 cut(s) 20
Esp3I CGTCTC 1 cut(s) 1939
FaeI CATG 3 cut(s) 1886, 2171, 2206
FalI AAGNNNNNCTT 2 cut(s) 1194, 1226
FaqI GGGAC 1 cut(s) 1646
FatI CATG 3 cut(s) 1882, 2167, 2202
Fnu4HI GCNGC 2 cut(s) 1081, 2455
FriOI GRGCYC 1 cut(s) 1846
Fsp4HI GCNGC 2 cut(s) 1081, 2455
GlaI GCGC 1 cut(s) 327
GluI GCNGC 2 cut(s) 1081, 2455
GsuI CTGGAG 1 cut(s) 1239
HaeIII GGCC 1 cut(s) 1494
HapII CCGG 2 cut(s) 2618, 2664
HgaI GACGC 2 cut(s) 1956, 2078
HhaI GCGC 1 cut(s) 328
Hin1II CATG 3 cut(s) 1886, 2171, 2206
Hin6I GCGC 1 cut(s) 326
HinP1I GCGC 1 cut(s) 326
HincII GTYRAC 2 cut(s) 1837, 1989
HindII GTYRAC 2 cut(s) 1837, 1989
HindIII AAGCTT 1 cut(s) 1696
HinfI GANTC 5 cut(s) 965, 1221, 1395, 1434, 1925
HpaI GTTAAC 1 cut(s) 1989
HpaII CCGG 2 cut(s) 2618, 2664
HphI GGTGA 6 cut(s) 238, 937, 1199, 1394, 1851, 2507
Hpy166II GTNNAC 4 cut(s) 178, 1622, 1837, 1989
Hpy188I TCNGA 9 cut(s) 1166, 1299, 1508, 1866, 2105, 2329, 2409, 2509, 2537
Hpy8I GTNNAC 4 cut(s) 178, 1622, 1837, 1989
Hpy99I CGWCG 1 cut(s) 2764
HpyCH4III ACNGT 4 cut(s) 1817, 1855, 2129, 2157
HpyCH4IV ACGT 4 cut(s) 732, 1161, 2139, 2773
HpyCH4V TGCA 9 cut(s) 1201, 1240, 1418, 1622, 2110, 2268, 2388, 2531, 2598
HpyF10VI GCNNNNNNNGC 5 cut(s) 1086, 1982, 2107, 2509, 2569
HpySE526I ACGT 4 cut(s) 732, 1161, 2139, 2773
Hsp92II CATG 3 cut(s) 1886, 2171, 2206
HspAI GCGC 1 cut(s) 326
Kpn2I TCCGGA 1 cut(s) 2617
KpnI GGTACC 1 cut(s) 2200
KspAI GTTAAC 1 cut(s) 1989
Kzo9I GATC 1 cut(s) 1598
LguI GCTCTTC 1 cut(s) 1485
LmnI GCTCC 5 cut(s) 4, 743, 1936, 2500, 2509
Lsp1109I GCAGC 1 cut(s) 2441
LweI GCATC 5 cut(s) 139, 1188, 1405, 1429, 1963
MaeII ACGT 4 cut(s) 732, 1161, 2139, 2773
MaeIII GTNAC 4 cut(s) 1268, 1849, 2681, 2769
MalI GATC 1 cut(s) 1600
MbiI CCGCTC 1 cut(s) 746
MboI GATC 1 cut(s) 1598
MfeI CAATTG 1 cut(s) 2553
MflI RGATCY 1 cut(s) 1598
MhlI GDGCHC 3 cut(s) 1624, 1846, 2672
MlsI TGGCCA 1 cut(s) 1494
MluNI TGGCCA 1 cut(s) 1494
MlyI GAGTC 2 cut(s) 1230, 1443
MmeI TCCRAC 2 cut(s) 2010, 2432
Mox20I TGGCCA 1 cut(s) 1494
MroI TCCGGA 1 cut(s) 2617
MscI TGGCCA 1 cut(s) 1494
MseI TTAA 8 cut(s) 1553, 1587, 1823, 1932, 1988, 2397, 2442, 2787
MslI CAYNNNNRTG 6 cut(s) 1256, 1627, 2115, 2142, 2189, 2420
Msp20I TGGCCA 1 cut(s) 1494
MspA1I CMGCKG 1 cut(s) 2563
MspCI CTTAAG 1 cut(s) 2396
MspI CCGG 2 cut(s) 2618, 2664
MspR9I CCNGG 2 cut(s) 1941, 2665
MunI CAATTG 1 cut(s) 2553
MvaI CCWGG 1 cut(s) 1941
MvnI CGCG 1 cut(s) 1626
MwoI GCNNNNNNNGC 5 cut(s) 1086, 1982, 2107, 2509, 2569
NciI CCSGG 1 cut(s) 2665
NdeII GATC 1 cut(s) 1598
NlaIII CATG 3 cut(s) 1886, 2171, 2206
NlaIV GGNNCC 5 cut(s) 6, 1662, 1938, 2198, 2290
OliI CACNNNNGTG 1 cut(s) 1627
PaeR7I CTCGAG 1 cut(s) 1874
PagI TCATGA 1 cut(s) 2167
PciSI GCTCTTC 1 cut(s) 1485
PfeI GAWTC 3 cut(s) 965, 1395, 1925
PkrI GCNGC 2 cut(s) 1082, 2456
PleI GAGTC 2 cut(s) 1229, 1442
PmaCI CACGTG 1 cut(s) 2140
PmlI CACGTG 1 cut(s) 2140
PpsI GAGTC 2 cut(s) 1229, 1442
Ppu21I YACGTR 1 cut(s) 2140
PpuMI RGGWCCY 1 cut(s) 1660
PshBI ATTAAT 1 cut(s) 1553
Psp124BI GAGCTC 1 cut(s) 1846
Psp5II RGGWCCY 1 cut(s) 1660
Psp6I CCWGG 1 cut(s) 1939
PspCI CACGTG 1 cut(s) 2140
PspGI CCWGG 1 cut(s) 1939
PspN4I GGNNCC 5 cut(s) 6, 1662, 1938, 2198, 2290
PspPI GGNCC 2 cut(s) 1660, 2722
PspPPI RGGWCCY 1 cut(s) 1660
PsuI RGATCY 1 cut(s) 1598
PvuII CAGCTG 1 cut(s) 2563
RsaI GTAC 3 cut(s) 1532, 2198, 2317
RsaNI GTAC 3 cut(s) 1531, 2197, 2316
RseI CAYNNNNRTG 6 cut(s) 1256, 1627, 2115, 2142, 2189, 2420
SacI GAGCTC 1 cut(s) 1846
SapI GCTCTTC 1 cut(s) 1485
SaqAI TTAA 8 cut(s) 1553, 1587, 1823, 1932, 1988, 2397, 2442, 2787
SatI GCNGC 2 cut(s) 1081, 2455
Sau3AI GATC 1 cut(s) 1598
Sau96I GGNCC 2 cut(s) 1660, 2722
SchI GAGTC 2 cut(s) 1230, 1443
ScrFI CCNGG 2 cut(s) 1941, 2665
SduI GDGCHC 3 cut(s) 1624, 1846, 2672
SfaNI GCATC 5 cut(s) 139, 1188, 1405, 1429, 1963
SfcI CTRYAG 1 cut(s) 2004
Sfr274I CTCGAG 1 cut(s) 1874
SinI GGWCC 2 cut(s) 1660, 2722
SlaI CTCGAG 1 cut(s) 1874
SmiMI CAYNNNNRTG 6 cut(s) 1256, 1627, 2115, 2142, 2189, 2420
SmlI CTYRAG 4 cut(s) 1543, 1566, 1874, 2396
SmoI CTYRAG 4 cut(s) 1543, 1566, 1874, 2396
SpeI ACTAGT 1 cut(s) 2318
SspI AATATT 1 cut(s) 1870
SstI GAGCTC 1 cut(s) 1846
StyD4I CCNGG 2 cut(s) 1939, 2663
StyI CCWWGG 1 cut(s) 20
TaaI ACNGT 4 cut(s) 1817, 1855, 2129, 2157
TaiI ACGT 4 cut(s) 735, 1164, 2142, 2776
TaqI TCGA 3 cut(s) 1437, 1608, 1875
TatI WGTACW 2 cut(s) 1530, 2315
TauI GCSGC 1 cut(s) 1083
TfiI GAWTC 3 cut(s) 965, 1395, 1925
Tru1I TTAA 8 cut(s) 1553, 1587, 1823, 1932, 1988, 2397, 2442, 2787
Tru9I TTAA 8 cut(s) 1553, 1587, 1823, 1932, 1988, 2397, 2442, 2787
TscAI CASTG 1 cut(s) 1820
TseI GCWGC 1 cut(s) 2454
TspDTI ATGAA 9 cut(s) 1193, 1365, 1382, 1983, 2099, 2184, 2216, 2219, 2438
TspGWI ACGGA 2 cut(s) 362, 1007
TspRI CASTG 1 cut(s) 1820
Vha464I CTTAAG 1 cut(s) 2396
VneI GTGCAC 1 cut(s) 1620
VpaK11BI GGWCC 2 cut(s) 1660, 2722
VspI ATTAAT 1 cut(s) 1553
XapI RAATTY 2 cut(s) 1133, 2704
XbaI TCTAGA 1 cut(s) 1735
XhoI CTCGAG 1 cut(s) 1874
XmaJI CCTAGG 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.