TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 3 - 78 | 5.3e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 10 - 63 | 3e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 49 - 131 | 5.2e-11 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 62 - 123 | 1.6e-07 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 334 |
| AgsI | TTSAA | 5 cut(s) | 44, 109, 257, 322, 401 |
| AluBI | AGCT | 2 cut(s) | 112, 325 |
| AluI | AGCT | 2 cut(s) | 112, 325 |
| Alw26I | GTCTC | 1 cut(s) | 26 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 135 |
| ApeKI | GCWGC | 2 cut(s) | 102, 174 |
| BbvI | GCAGC | 2 cut(s) | 89, 161 |
| BccI | CCATC | 3 cut(s) | 61, 236, 274 |
| BcoDI | GTCTC | 1 cut(s) | 26 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 99 |
| BisI | GCNGC | 2 cut(s) | 103, 175 |
| BlsI | GCNGC | 2 cut(s) | 104, 176 |
| BpmI | CTGGAG | 1 cut(s) | 209 |
| BpuEI | CTTGAG | 3 cut(s) | 128, 206, 341 |
| Bsa29I | ATCGAT | 1 cut(s) | 348 |
| Bse1I | ACTGG | 1 cut(s) | 226 |
| BseCI | ATCGAT | 1 cut(s) | 348 |
| BseGI | GGATG | 2 cut(s) | 34, 247 |
| BseNI | ACTGG | 1 cut(s) | 226 |
| BseXI | GCAGC | 2 cut(s) | 89, 161 |
| BshVI | ATCGAT | 1 cut(s) | 348 |
| BslFI | GGGAC | 3 cut(s) | 133, 259, 346 |
| BsmAI | GTCTC | 1 cut(s) | 26 |
| BsmFI | GGGAC | 3 cut(s) | 133, 259, 346 |
| Bsp143I | GATC | 1 cut(s) | 349 |
| BspDI | ATCGAT | 1 cut(s) | 348 |
| BsrI | ACTGG | 1 cut(s) | 226 |
| BssMI | GATC | 1 cut(s) | 349 |
| BstF5I | GGATG | 2 cut(s) | 34, 247 |
| BstKTI | GATC | 1 cut(s) | 352 |
| BstMAI | GTCTC | 1 cut(s) | 26 |
| BstMBI | GATC | 1 cut(s) | 349 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 99 |
| BstV1I | GCAGC | 2 cut(s) | 89, 161 |
| Bsu15I | ATCGAT | 1 cut(s) | 348 |
| BsuTUI | ATCGAT | 1 cut(s) | 348 |
| BtsCI | GGATG | 2 cut(s) | 34, 247 |
| BtsIMutI | CAGTG | 1 cut(s) | 233 |
| CaiI | CAGNNNCTG | 1 cut(s) | 135 |
| ClaI | ATCGAT | 1 cut(s) | 348 |
| CviAII | CATG | 2 cut(s) | 126, 339 |
| DpnI | GATC | 1 cut(s) | 351 |
| DpnII | GATC | 1 cut(s) | 349 |
| FaeI | CATG | 2 cut(s) | 129, 342 |
| FaiI | YATR | 5 cut(s) | 127, 215, 340, 370, 372 |
| FaqI | GGGAC | 3 cut(s) | 133, 259, 346 |
| FatI | CATG | 2 cut(s) | 125, 338 |
| FblI | GTMKAC | 1 cut(s) | 334 |
| Fnu4HI | GCNGC | 2 cut(s) | 103, 175 |
| FokI | GGATG | 2 cut(s) | 41, 254 |
| Fsp4HI | GCNGC | 2 cut(s) | 103, 175 |
| GluI | GCNGC | 2 cut(s) | 103, 175 |
| GsuI | CTGGAG | 1 cut(s) | 209 |
| Hin1II | CATG | 2 cut(s) | 129, 342 |
| HincII | GTYRAC | 1 cut(s) | 140 |
| HindII | GTYRAC | 1 cut(s) | 140 |
| HindIII | AAGCTT | 2 cut(s) | 110, 323 |
| Hpy166II | GTNNAC | 2 cut(s) | 140, 335 |
| Hpy188III | TCNNGA | 3 cut(s) | 185, 197, 398 |
| Hpy8I | GTNNAC | 2 cut(s) | 140, 335 |
| Hpy99I | CGWCG | 2 cut(s) | 61, 274 |
| HpyCH4V | TGCA | 4 cut(s) | 38, 129, 251, 342 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 99 |
| Hsp92II | CATG | 2 cut(s) | 129, 342 |
| Kzo9I | GATC | 1 cut(s) | 349 |
| LpnPI | CCDG | 6 cut(s) | 156, 164, 210, 239, 273, 377 |
| Lsp1109I | GCAGC | 2 cut(s) | 89, 161 |
| MaeIII | GTNAC | 1 cut(s) | 383 |
| MalI | GATC | 1 cut(s) | 351 |
| MboI | GATC | 1 cut(s) | 349 |
| MboII | GAAGA | 2 cut(s) | 56, 269 |
| MfeI | CAATTG | 2 cut(s) | 39, 252 |
| MluCI | AATT | 3 cut(s) | 39, 252, 418 |
| MseI | TTAA | 3 cut(s) | 96, 114, 327 |
| MunI | CAATTG | 2 cut(s) | 39, 252 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 99 |
| NdeII | GATC | 1 cut(s) | 349 |
| NlaIII | CATG | 2 cut(s) | 129, 342 |
| NmuCI | GTSAC | 1 cut(s) | 383 |
| PkrI | GCNGC | 2 cut(s) | 104, 176 |
| PstNI | CAGNNNCTG | 1 cut(s) | 135 |
| SaqAI | TTAA | 3 cut(s) | 96, 114, 327 |
| SatI | GCNGC | 2 cut(s) | 103, 175 |
| Sau3AI | GATC | 1 cut(s) | 349 |
| SetI | ASST | 2 cut(s) | 114, 327 |
| SmlI | CTYRAG | 3 cut(s) | 143, 185, 356 |
| SmoI | CTYRAG | 3 cut(s) | 143, 185, 356 |
| Sse9I | AATT | 3 cut(s) | 39, 252, 418 |
| TaqI | TCGA | 3 cut(s) | 59, 272, 348 |
| TasI | AATT | 3 cut(s) | 39, 252, 418 |
| Tru1I | TTAA | 3 cut(s) | 96, 114, 327 |
| Tru9I | TTAA | 3 cut(s) | 96, 114, 327 |
| TscAI | CASTG | 1 cut(s) | 233 |
| TseFI | GTSAC | 1 cut(s) | 383 |
| TseI | GCWGC | 2 cut(s) | 102, 174 |
| Tsp45I | GTSAC | 1 cut(s) | 383 |
| TspDTI | ATGAA | 1 cut(s) | 230 |
| TspRI | CASTG | 1 cut(s) | 233 |
| XmiI | GTMKAC | 1 cut(s) | 334 |