TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 51 - 135 | 5.8e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 88 - 138 | 1.1e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 212 - 296 | 9.8e-15 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 282 - 356 | 4.4e-11 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 312 - 360 | 2.2e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 38 |
| Acc36I | ACCTGC | 1 cut(s) | 976 |
| AciI | CCGC | 3 cut(s) | 225, 294, 540 |
| AclWI | GGATC | 1 cut(s) | 77 |
| AcsI | RAATTY | 6 cut(s) | 53, 107, 318, 491, 690, 904 |
| AcuI | CTGAAG | 1 cut(s) | 113 |
| AfaI | GTAC | 1 cut(s) | 154 |
| AflII | CTTAAG | 1 cut(s) | 233 |
| AgsI | TTSAA | 8 cut(s) | 59, 445, 644, 696, 793, 799, 857, 1070 |
| AjnI | CCWGG | 2 cut(s) | 25, 198 |
| AluBI | AGCT | 8 cut(s) | 474, 514, 523, 712, 721, 925, 934, 1064 |
| AluI | AGCT | 8 cut(s) | 474, 514, 523, 712, 721, 925, 934, 1064 |
| Alw21I | GWGCWC | 1 cut(s) | 525 |
| Alw26I | GTCTC | 2 cut(s) | 192, 574 |
| AlwI | GGATC | 1 cut(s) | 77 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 47 |
| ApeKI | GCWGC | 3 cut(s) | 297, 419, 618 |
| ApoI | RAATTY | 6 cut(s) | 53, 107, 318, 491, 690, 904 |
| AsuHPI | GGTGA | 4 cut(s) | 80, 164, 553, 979 |
| AsuII | TTCGAA | 2 cut(s) | 145, 216 |
| BanII | GRGCYC | 1 cut(s) | 525 |
| BbsI | GAAGAC | 3 cut(s) | 602, 815, 1028 |
| Bbv12I | GWGCWC | 1 cut(s) | 525 |
| BbvI | GCAGC | 3 cut(s) | 309, 431, 630 |
| BccI | CCATC | 1 cut(s) | 184 |
| BciT130I | CCWGG | 2 cut(s) | 27, 200 |
| BcoDI | GTCTC | 2 cut(s) | 192, 574 |
| BfaI | CTAG | 2 cut(s) | 660, 899 |
| BfmI | CTRYAG | 1 cut(s) | 332 |
| BfrI | CTTAAG | 1 cut(s) | 233 |
| BfuAI | ACCTGC | 1 cut(s) | 976 |
| BisI | GCNGC | 4 cut(s) | 295, 298, 420, 619 |
| BlsI | GCNGC | 4 cut(s) | 296, 299, 421, 620 |
| Bme1390I | CCNGG | 2 cut(s) | 27, 200 |
| BmrFI | CCNGG | 2 cut(s) | 27, 200 |
| BmsI | GCATC | 4 cut(s) | 431, 454, 653, 866 |
| BpiI | GAAGAC | 3 cut(s) | 602, 815, 1028 |
| Bpu14I | TTCGAA | 2 cut(s) | 145, 216 |
| BpuEI | CTTGAG | 8 cut(s) | 149, 185, 496, 623, 695, 836, 908, 1049 |
| Bsa29I | ATCGAT | 1 cut(s) | 81 |
| Bse1I | ACTGG | 2 cut(s) | 370, 409 |
| BseBI | CCWGG | 2 cut(s) | 27, 200 |
| BseCI | ATCGAT | 1 cut(s) | 81 |
| BseGI | GGATG | 3 cut(s) | 176, 469, 881 |
| BseMII | CTCAG | 3 cut(s) | 510, 569, 995 |
| BseNI | ACTGG | 2 cut(s) | 370, 409 |
| BseXI | GCAGC | 3 cut(s) | 309, 431, 630 |
| BshVI | ATCGAT | 1 cut(s) | 81 |
| BsiHKAI | GWGCWC | 1 cut(s) | 525 |
| BsmAI | GTCTC | 2 cut(s) | 192, 574 |
| BsmBI | CGTCTC | 1 cut(s) | 192 |
| Bsp119I | TTCGAA | 2 cut(s) | 145, 216 |
| Bsp1286I | GDGCHC | 1 cut(s) | 525 |
| Bsp1407I | TGTACA | 1 cut(s) | 152 |
| Bsp143I | GATC | 2 cut(s) | 78, 82 |
| BspACI | CCGC | 3 cut(s) | 225, 294, 540 |
| BspCNI | CTCAG | 3 cut(s) | 511, 570, 996 |
| BspDI | ATCGAT | 1 cut(s) | 81 |
| BspMAI | CTGCAG | 1 cut(s) | 336 |
| BspMI | ACCTGC | 1 cut(s) | 976 |
| BspPI | GGATC | 1 cut(s) | 77 |
| BspQI | GCTCTTC | 1 cut(s) | 1071 |
| BspT104I | TTCGAA | 2 cut(s) | 145, 216 |
| BspTI | CTTAAG | 1 cut(s) | 233 |
| BsrGI | TGTACA | 1 cut(s) | 152 |
| BsrI | ACTGG | 2 cut(s) | 370, 409 |
| BssMI | GATC | 2 cut(s) | 78, 82 |
| Bst2UI | CCWGG | 2 cut(s) | 27, 200 |
| Bst6I | CTCTTC | 4 cut(s) | 446, 645, 858, 1071 |
| BstAFI | CTTAAG | 1 cut(s) | 233 |
| BstAUI | TGTACA | 1 cut(s) | 152 |
| BstBI | TTCGAA | 2 cut(s) | 145, 216 |
| BstDEI | CTNAG | 5 cut(s) | 269, 519, 578, 717, 1004 |
| BstF5I | GGATG | 3 cut(s) | 176, 469, 881 |
| BstKTI | GATC | 2 cut(s) | 81, 85 |
| BstMAI | GTCTC | 2 cut(s) | 192, 574 |
| BstMBI | GATC | 2 cut(s) | 78, 82 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 520, 718, 931 |
| BstNI | CCWGG | 2 cut(s) | 27, 200 |
| BstSCI | CCNGG | 2 cut(s) | 25, 198 |
| BstSFI | CTRYAG | 1 cut(s) | 332 |
| BstV1I | GCAGC | 3 cut(s) | 309, 431, 630 |
| BstV2I | GAAGAC | 3 cut(s) | 602, 815, 1028 |
| Bsu15I | ATCGAT | 1 cut(s) | 81 |
| BsuTUI | ATCGAT | 1 cut(s) | 81 |
| BtsCI | GGATG | 3 cut(s) | 176, 469, 881 |
| BtsI | GCAGTG | 2 cut(s) | 735, 948 |
| BtsIMutI | CAGTG | 2 cut(s) | 735, 948 |
| BveI | ACCTGC | 1 cut(s) | 976 |
| CaiI | CAGNNNCTG | 1 cut(s) | 47 |
| ClaI | ATCGAT | 1 cut(s) | 81 |
| CseI | GACGC | 1 cut(s) | 960 |
| CsiI | ACCWGGT | 1 cut(s) | 198 |
| Csp6I | GTAC | 1 cut(s) | 153 |
| CviAII | CATG | 4 cut(s) | 288, 454, 782, 844 |
| CviQI | GTAC | 1 cut(s) | 153 |
| DdeI | CTNAG | 5 cut(s) | 269, 519, 578, 717, 1004 |
| DpnI | GATC | 2 cut(s) | 80, 84 |
| DpnII | GATC | 2 cut(s) | 78, 82 |
| DraI | TTTAAA | 3 cut(s) | 357, 768, 981 |
| Eam1104I | CTCTTC | 4 cut(s) | 446, 645, 858, 1071 |
| EarI | CTCTTC | 4 cut(s) | 446, 645, 858, 1071 |
| Ecl136II | GAGCTC | 1 cut(s) | 523 |
| Eco24I | GRGCYC | 1 cut(s) | 525 |
| Eco53kI | GAGCTC | 1 cut(s) | 523 |
| Eco57I | CTGAAG | 1 cut(s) | 113 |
| EcoICRI | GAGCTC | 1 cut(s) | 523 |
| EcoRI | GAATTC | 1 cut(s) | 107 |
| EcoRII | CCWGG | 2 cut(s) | 25, 198 |
| EcoT38I | GRGCYC | 1 cut(s) | 525 |
| Esp3I | CGTCTC | 1 cut(s) | 192 |
| FaeI | CATG | 4 cut(s) | 291, 457, 785, 847 |
| FatI | CATG | 4 cut(s) | 287, 453, 781, 843 |
| FauNDI | CATATG | 1 cut(s) | 12 |
| Fnu4HI | GCNGC | 4 cut(s) | 295, 298, 420, 619 |
| FokI | GGATG | 3 cut(s) | 163, 476, 888 |
| FriOI | GRGCYC | 1 cut(s) | 525 |
| Fsp4HI | GCNGC | 4 cut(s) | 295, 298, 420, 619 |
| FspBI | CTAG | 2 cut(s) | 660, 899 |
| GluI | GCNGC | 4 cut(s) | 295, 298, 420, 619 |
| HgaI | GACGC | 1 cut(s) | 960 |
| Hin1II | CATG | 4 cut(s) | 291, 457, 785, 847 |
| HindIII | AAGCTT | 2 cut(s) | 472, 719 |
| HinfI | GANTC | 4 cut(s) | 408, 607, 820, 1033 |
| HphI | GGTGA | 4 cut(s) | 80, 164, 553, 979 |
| Hpy166II | GTNNAC | 2 cut(s) | 161, 172 |
| Hpy188I | TCNGA | 6 cut(s) | 325, 346, 520, 579, 910, 1005 |
| Hpy8I | GTNNAC | 2 cut(s) | 161, 172 |
| HpyAV | CCTTC | 1 cut(s) | 460 |
| HpyCH4V | TGCA | 5 cut(s) | 334, 594, 740, 953, 1020 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 520, 718, 931 |
| HpyF3I | CTNAG | 5 cut(s) | 269, 519, 578, 717, 1004 |
| Hsp92II | CATG | 4 cut(s) | 291, 457, 785, 847 |
| Kzo9I | GATC | 2 cut(s) | 78, 82 |
| LguI | GCTCTTC | 1 cut(s) | 1071 |
| Lsp1109I | GCAGC | 3 cut(s) | 309, 431, 630 |
| LweI | GCATC | 4 cut(s) | 431, 454, 653, 866 |
| MabI | ACCWGGT | 1 cut(s) | 198 |
| MaeI | CTAG | 2 cut(s) | 660, 899 |
| MaeIII | GTNAC | 4 cut(s) | 5, 533, 571, 839 |
| MalI | GATC | 2 cut(s) | 80, 84 |
| MboI | GATC | 2 cut(s) | 78, 82 |
| MfeI | CAATTG | 1 cut(s) | 622 |
| MhlI | GDGCHC | 1 cut(s) | 525 |
| MlyI | GAGTC | 3 cut(s) | 616, 829, 1042 |
| MspCI | CTTAAG | 1 cut(s) | 233 |
| MspR9I | CCNGG | 2 cut(s) | 27, 200 |
| MunI | CAATTG | 1 cut(s) | 622 |
| MvaI | CCWGG | 2 cut(s) | 27, 200 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 520, 718, 931 |
| NdeI | CATATG | 1 cut(s) | 12 |
| NdeII | GATC | 2 cut(s) | 78, 82 |
| NlaIII | CATG | 4 cut(s) | 291, 457, 785, 847 |
| NmuCI | GTSAC | 2 cut(s) | 533, 839 |
| NspV | TTCGAA | 2 cut(s) | 145, 216 |
| PciSI | GCTCTTC | 1 cut(s) | 1071 |
| PfeI | GAWTC | 1 cut(s) | 408 |
| PfoI | TCCNGGA | 1 cut(s) | 25 |
| PkrI | GCNGC | 4 cut(s) | 296, 299, 421, 620 |
| PleI | GAGTC | 3 cut(s) | 615, 828, 1041 |
| PpsI | GAGTC | 3 cut(s) | 615, 828, 1041 |
| PsiI | TTATAA | 1 cut(s) | 38 |
| Psp124BI | GAGCTC | 1 cut(s) | 525 |
| Psp6I | CCWGG | 2 cut(s) | 25, 198 |
| PspGI | CCWGG | 2 cut(s) | 25, 198 |
| PstI | CTGCAG | 1 cut(s) | 336 |
| PstNI | CAGNNNCTG | 1 cut(s) | 47 |
| RsaI | GTAC | 1 cut(s) | 154 |
| RsaNI | GTAC | 1 cut(s) | 153 |
| SacI | GAGCTC | 1 cut(s) | 525 |
| SapI | GCTCTTC | 1 cut(s) | 1071 |
| SatI | GCNGC | 4 cut(s) | 295, 298, 420, 619 |
| Sau3AI | GATC | 2 cut(s) | 78, 82 |
| SchI | GAGTC | 3 cut(s) | 616, 829, 1042 |
| ScrFI | CCNGG | 2 cut(s) | 27, 200 |
| SduI | GDGCHC | 1 cut(s) | 525 |
| SexAI | ACCWGGT | 1 cut(s) | 198 |
| SfaNI | GCATC | 4 cut(s) | 431, 454, 653, 866 |
| SfcI | CTRYAG | 1 cut(s) | 332 |
| SfuI | TTCGAA | 2 cut(s) | 145, 216 |
| SmiI | ATTTAAAT | 1 cut(s) | 357 |
| SmlI | CTYRAG | 9 cut(s) | 128, 164, 233, 475, 602, 674, 815, 887, 1028 |
| SmoI | CTYRAG | 9 cut(s) | 128, 164, 233, 475, 602, 674, 815, 887, 1028 |
| SsiI | CCGC | 3 cut(s) | 225, 294, 540 |
| SspMI | CTAG | 2 cut(s) | 660, 899 |
| SstI | GAGCTC | 1 cut(s) | 525 |
| StyD4I | CCNGG | 2 cut(s) | 25, 198 |
| SwaI | ATTTAAAT | 1 cut(s) | 357 |
| TaqI | TCGA | 3 cut(s) | 81, 145, 216 |
| TatI | WGTACW | 1 cut(s) | 152 |
| TauI | GCSGC | 1 cut(s) | 297 |
| TfiI | GAWTC | 1 cut(s) | 408 |
| TscAI | CASTG | 2 cut(s) | 742, 955 |
| TseFI | GTSAC | 2 cut(s) | 533, 839 |
| TseI | GCWGC | 3 cut(s) | 297, 419, 618 |
| Tsp45I | GTSAC | 2 cut(s) | 533, 839 |
| TspDTI | ATGAA | 8 cut(s) | 275, 276, 442, 647, 719, 860, 932, 1073 |
| TspGWI | ACGGA | 2 cut(s) | 128, 747 |
| TspRI | CASTG | 2 cut(s) | 742, 955 |
| Vha464I | CTTAAG | 1 cut(s) | 233 |
| XapI | RAATTY | 6 cut(s) | 53, 107, 318, 491, 690, 904 |
| XbaI | TCTAGA | 2 cut(s) | 659, 898 |
| XspI | CTAG | 2 cut(s) | 660, 899 |