TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 5 - 171 | 8.1e-21 | NB-ARC domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 25 |
| AcuI | CTGAAG | 2 cut(s) | 26, 254 |
| AfaI | GTAC | 2 cut(s) | 149, 201 |
| AgsI | TTSAA | 7 cut(s) | 30, 121, 143, 197, 262, 350, 482 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 293, 325, 342, 374 |
| AluBI | AGCT | 4 cut(s) | 113, 179, 292, 476 |
| AluI | AGCT | 4 cut(s) | 113, 179, 292, 476 |
| Alw26I | GTCTC | 2 cut(s) | 434, 542 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 253 |
| ApoI | RAATTY | 1 cut(s) | 25 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 336 |
| AsuHPI | GGTGA | 3 cut(s) | 58, 332, 392 |
| BbsI | GAAGAC | 1 cut(s) | 32 |
| BcoDI | GTCTC | 2 cut(s) | 434, 542 |
| BfaI | CTAG | 4 cut(s) | 89, 108, 293, 408 |
| BmcAI | AGTACT | 1 cut(s) | 149 |
| BpiI | GAAGAC | 1 cut(s) | 32 |
| BpuEI | CTTGAG | 1 cut(s) | 526 |
| Bse3DI | GCAATG | 2 cut(s) | 102, 472 |
| BseMI | GCAATG | 2 cut(s) | 102, 472 |
| BseMII | CTCAG | 1 cut(s) | 245 |
| BsgI | GTGCAG | 1 cut(s) | 266 |
| Bsh1285I | CGRYCG | 1 cut(s) | 535 |
| BsiEI | CGRYCG | 1 cut(s) | 535 |
| BslFI | GGGAC | 1 cut(s) | 539 |
| BsmAI | GTCTC | 2 cut(s) | 434, 542 |
| BsmBI | CGTCTC | 2 cut(s) | 434, 542 |
| BsmFI | GGGAC | 1 cut(s) | 539 |
| Bsp143I | GATC | 1 cut(s) | 532 |
| BspCNI | CTCAG | 1 cut(s) | 246 |
| BsrDI | GCAATG | 2 cut(s) | 102, 472 |
| BssMI | GATC | 1 cut(s) | 532 |
| Bst4CI | ACNGT | 3 cut(s) | 147, 337, 486 |
| BstDEI | CTNAG | 2 cut(s) | 254, 425 |
| BstKTI | GATC | 1 cut(s) | 535 |
| BstMAI | GTCTC | 2 cut(s) | 434, 542 |
| BstMBI | GATC | 1 cut(s) | 532 |
| BstMCI | CGRYCG | 1 cut(s) | 535 |
| BstNSI | RCATGY | 1 cut(s) | 374 |
| BstV2I | GAAGAC | 1 cut(s) | 32 |
| CaiI | CAGNNNCTG | 1 cut(s) | 253 |
| Csp6I | GTAC | 2 cut(s) | 148, 200 |
| CviAII | CATG | 1 cut(s) | 371 |
| CviJI | RGCY | 6 cut(s) | 113, 179, 292, 451, 476, 599 |
| CviKI_1 | RGCY | 6 cut(s) | 113, 179, 292, 451, 476, 599 |
| CviQI | GTAC | 2 cut(s) | 148, 200 |
| DdeI | CTNAG | 2 cut(s) | 254, 425 |
| DpnI | GATC | 1 cut(s) | 534 |
| DpnII | GATC | 1 cut(s) | 532 |
| DraI | TTTAAA | 1 cut(s) | 184 |
| Eco57I | CTGAAG | 2 cut(s) | 26, 254 |
| EcoRI | GAATTC | 1 cut(s) | 25 |
| EcoT22I | ATGCAT | 1 cut(s) | 376 |
| Esp3I | CGTCTC | 2 cut(s) | 434, 542 |
| FaeI | CATG | 1 cut(s) | 374 |
| FaqI | GGGAC | 1 cut(s) | 539 |
| FatI | CATG | 1 cut(s) | 370 |
| FspBI | CTAG | 4 cut(s) | 89, 108, 293, 408 |
| Hin1II | CATG | 1 cut(s) | 374 |
| HindIII | AAGCTT | 1 cut(s) | 177 |
| HinfI | GANTC | 4 cut(s) | 5, 250, 350, 393 |
| HphI | GGTGA | 3 cut(s) | 58, 332, 392 |
| Hpy166II | GTNNAC | 1 cut(s) | 340 |
| Hpy188I | TCNGA | 2 cut(s) | 255, 506 |
| Hpy188III | TCNNGA | 4 cut(s) | 30, 161, 479, 605 |
| Hpy8I | GTNNAC | 1 cut(s) | 340 |
| Hpy99I | CGWCG | 1 cut(s) | 457 |
| HpyAV | CCTTC | 1 cut(s) | 229 |
| HpyCH4III | ACNGT | 3 cut(s) | 147, 337, 486 |
| HpyCH4IV | ACGT | 2 cut(s) | 443, 455 |
| HpyCH4V | TGCA | 3 cut(s) | 208, 247, 374 |
| HpyF3I | CTNAG | 2 cut(s) | 254, 425 |
| HpySE526I | ACGT | 2 cut(s) | 443, 455 |
| Hsp92II | CATG | 1 cut(s) | 374 |
| Kzo9I | GATC | 1 cut(s) | 532 |
| LpnPI | CCDG | 4 cut(s) | 29, 166, 194, 508 |
| MaeI | CTAG | 4 cut(s) | 89, 108, 293, 408 |
| MaeII | ACGT | 2 cut(s) | 443, 455 |
| MaeIII | GTNAC | 1 cut(s) | 400 |
| MalI | GATC | 1 cut(s) | 534 |
| MboI | GATC | 1 cut(s) | 532 |
| MboII | GAAGA | 2 cut(s) | 32, 224 |
| MluCI | AATT | 4 cut(s) | 25, 126, 137, 345 |
| MlyI | GAGTC | 2 cut(s) | 259, 402 |
| MmeI | TCCRAC | 2 cut(s) | 46, 251 |
| MnlI | CCTC | 2 cut(s) | 260, 376 |
| Mph1103I | ATGCAT | 1 cut(s) | 376 |
| MroXI | GAANNNNTTC | 1 cut(s) | 336 |
| MseI | TTAA | 4 cut(s) | 183, 435, 461, 585 |
| NdeII | GATC | 1 cut(s) | 532 |
| NlaIII | CATG | 1 cut(s) | 374 |
| NmuCI | GTSAC | 1 cut(s) | 400 |
| NsiI | ATGCAT | 1 cut(s) | 376 |
| NspI | RCATGY | 1 cut(s) | 374 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 449 |
| PdmI | GAANNNNTTC | 1 cut(s) | 336 |
| PfeI | GAWTC | 2 cut(s) | 5, 350 |
| Ple19I | CGATCG | 1 cut(s) | 535 |
| PleI | GAGTC | 2 cut(s) | 258, 401 |
| PpsI | GAGTC | 2 cut(s) | 258, 401 |
| PstNI | CAGNNNCTG | 1 cut(s) | 253 |
| PvuI | CGATCG | 1 cut(s) | 535 |
| RsaI | GTAC | 2 cut(s) | 149, 201 |
| RsaNI | GTAC | 2 cut(s) | 148, 200 |
| SaqAI | TTAA | 4 cut(s) | 183, 435, 461, 585 |
| Sau3AI | GATC | 1 cut(s) | 532 |
| ScaI | AGTACT | 1 cut(s) | 149 |
| SchI | GAGTC | 2 cut(s) | 259, 402 |
| SmlI | CTYRAG | 1 cut(s) | 541 |
| SmoI | CTYRAG | 1 cut(s) | 541 |
| Sse9I | AATT | 4 cut(s) | 25, 126, 137, 345 |
| SspI | AATATT | 1 cut(s) | 560 |
| SspMI | CTAG | 4 cut(s) | 89, 108, 293, 408 |
| TaaI | ACNGT | 3 cut(s) | 147, 337, 486 |
| TaiI | ACGT | 2 cut(s) | 446, 458 |
| TasI | AATT | 4 cut(s) | 25, 126, 137, 345 |
| TatI | WGTACW | 2 cut(s) | 147, 199 |
| TfiI | GAWTC | 2 cut(s) | 5, 350 |
| Tru1I | TTAA | 4 cut(s) | 183, 435, 461, 585 |
| Tru9I | TTAA | 4 cut(s) | 183, 435, 461, 585 |
| TseFI | GTSAC | 1 cut(s) | 400 |
| Tsp45I | GTSAC | 1 cut(s) | 400 |
| TspDTI | ATGAA | 3 cut(s) | 38, 314, 486 |
| XapI | RAATTY | 1 cut(s) | 25 |
| XceI | RCATGY | 1 cut(s) | 374 |
| XmnI | GAANNNNTTC | 1 cut(s) | 336 |
| XspI | CTAG | 4 cut(s) | 89, 108, 293, 408 |
| ZrmI | AGTACT | 1 cut(s) | 149 |
| Zsp2I | ATGCAT | 1 cut(s) | 376 |