Conserved oligomeric Golgi complex subunit
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 1 - 98 | 1.9e-18 | TIR domain |
| NB-ARC | PF00931 | 160 - 315 | 1.5e-18 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 383 - 453 | 1.1e-22 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 641 - 769 | 5.6e-09 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 648 - 737 | 2.9e-11 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 741 - 826 | 6.6e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 743 - 829 | 4.9e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 810 - 874 | 1.4e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 828 - 987 | 2.8e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 905 - 968 | 2.7e-06 | Leucine-rich repeat region |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 833 |
| AccBSI | CCGCTC | 1 cut(s) | 161 |
| AccII | CGCG | 1 cut(s) | 1056 |
| AccIII | TCCGGA | 2 cut(s) | 2134, 2419 |
| AciI | CCGC | 7 cut(s) | 159, 395, 419, 443, 513, 1348, 1930 |
| AclWI | GGATC | 6 cut(s) | 50, 63, 113, 1036, 1084, 2177 |
| AcoI | YGGCCR | 3 cut(s) | 2178, 2463, 2642 |
| AcsI | RAATTY | 5 cut(s) | 566, 1104, 1536, 1742, 2654 |
| AcuI | CTGAAG | 5 cut(s) | 114, 919, 1793, 2102, 2387 |
| AcyI | GRCGYC | 1 cut(s) | 1393 |
| AfaI | GTAC | 5 cut(s) | 144, 627, 849, 962, 1834 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 809, 1099, 1100, 2978 |
| AflII | CTTAAG | 1 cut(s) | 1913 |
| AflIII | ACRYGT | 1 cut(s) | 1482 |
| AhlI | ACTAGT | 1 cut(s) | 1835 |
| AjiI | CACGTC | 2 cut(s) | 200, 1483 |
| AjnI | CCWGG | 1 cut(s) | 291 |
| AleI | CACNNNNGTG | 1 cut(s) | 1057 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1242, 1274 |
| Alw21I | GWGCWC | 4 cut(s) | 1054, 1276, 2189, 2474 |
| Alw26I | GTCTC | 5 cut(s) | 333, 1291, 1301, 1513, 1889 |
| Alw44I | GTGCAC | 1 cut(s) | 1050 |
| AlwI | GGATC | 6 cut(s) | 50, 63, 113, 1036, 1084, 2177 |
| Aor13HI | TCCGGA | 2 cut(s) | 2134, 2419 |
| AoxI | GGCC | 4 cut(s) | 289, 2178, 2463, 2642 |
| ApaLI | GTGCAC | 1 cut(s) | 1050 |
| ApeKI | GCWGC | 3 cut(s) | 1971, 2256, 3019 |
| ApoI | RAATTY | 5 cut(s) | 566, 1104, 1536, 1742, 2654 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1469, 1501 |
| AseI | ATTAAT | 2 cut(s) | 983, 1803 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 642, 909 |
| AspA2I | CCTAGG | 1 cut(s) | 341 |
| AspS9I | GGNCC | 3 cut(s) | 34, 156, 2524 |
| AsuC2I | CCSGG | 3 cut(s) | 1371, 2182, 2467 |
| AsuHPI | GGTGA | 5 cut(s) | 434, 824, 1281, 2024, 2309 |
| AvaII | GGWCC | 3 cut(s) | 34, 156, 2524 |
| AvrII | CCTAGG | 1 cut(s) | 341 |
| BaeGI | GKGCMC | 1 cut(s) | 1054 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 134, 167 |
| BalI | TGGCCA | 1 cut(s) | 2644 |
| BamHI | GGATCC | 1 cut(s) | 55 |
| BanII | GRGCYC | 2 cut(s) | 1276, 1371 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1200, 1232 |
| BbsI | GAAGAC | 4 cut(s) | 1381, 2123, 2408, 2769 |
| Bbv12I | GWGCWC | 4 cut(s) | 1054, 1276, 2189, 2474 |
| BbvI | GCAGC | 3 cut(s) | 1958, 2243, 3006 |
| BceAI | ACGGC | 1 cut(s) | 2093 |
| BciT130I | CCWGG | 1 cut(s) | 293 |
| BciVI | GTATCC | 1 cut(s) | 1619 |
| BclI | TGATCA | 2 cut(s) | 261, 2682 |
| BcnI | CCSGG | 3 cut(s) | 1371, 2182, 2467 |
| BcoDI | GTCTC | 5 cut(s) | 333, 1291, 1301, 1513, 1889 |
| BcuI | ACTAGT | 1 cut(s) | 1835 |
| BfmI | CTRYAG | 2 cut(s) | 1322, 1434 |
| BfrI | CTTAAG | 1 cut(s) | 1913 |
| BfuI | GTATCC | 1 cut(s) | 1619 |
| BisI | GCNGC | 4 cut(s) | 514, 1972, 2257, 3020 |
| BlnI | CCTAGG | 1 cut(s) | 341 |
| BlpI | GCTNAGC | 1 cut(s) | 1407 |
| BlsI | GCNGC | 4 cut(s) | 515, 1973, 2258, 3021 |
| BmcAI | AGTACT | 1 cut(s) | 962 |
| Bme1390I | CCNGG | 4 cut(s) | 293, 1371, 2182, 2467 |
| Bme18I | GGWCC | 3 cut(s) | 34, 156, 2524 |
| BmgBI | CACGTC | 2 cut(s) | 200, 1483 |
| BmgT120I | GGNCC | 3 cut(s) | 34, 156, 2524 |
| BmiI | GGNNCC | 5 cut(s) | 36, 57, 306, 1368, 1720 |
| BmrFI | CCNGG | 4 cut(s) | 293, 1371, 2182, 2467 |
| BmsI | GCATC | 5 cut(s) | 205, 621, 1393, 2917, 2981 |
| BoxI | GACNNNNGTC | 1 cut(s) | 198 |
| BpiI | GAAGAC | 4 cut(s) | 1381, 2123, 2408, 2769 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 145, 177, 1804, 1836 |
| BpmI | CTGGAG | 1 cut(s) | 672 |
| Bpu10I | CCTNAGC | 2 cut(s) | 517, 679 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1407 |
| BpuEI | CTTGAG | 3 cut(s) | 62, 981, 2893 |
| BpuMI | CCSGG | 3 cut(s) | 1371, 2182, 2467 |
| BsaBI | GATNNNNATC | 1 cut(s) | 266 |
| BsaHI | GRCGYC | 1 cut(s) | 1393 |
| BsaJI | CCNNGG | 1 cut(s) | 341 |
| BsaWI | WCCGGW | 2 cut(s) | 2134, 2419 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 809, 1099, 1100, 2978 |
| Bse1I | ACTGG | 3 cut(s) | 925, 2214, 2718 |
| Bse3DI | GCAATG | 5 cut(s) | 531, 577, 1170, 2746, 2780 |
| Bse8I | GATNNNNATC | 1 cut(s) | 266 |
| BseAI | TCCGGA | 2 cut(s) | 2134, 2419 |
| BseBI | CCWGG | 1 cut(s) | 293 |
| BseDI | CCNNGG | 1 cut(s) | 341 |
| BseJI | GATNNNNATC | 1 cut(s) | 266 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 809, 1099, 1100, 2978 |
| BseMI | GCAATG | 5 cut(s) | 531, 577, 1170, 2746, 2780 |
| BseMII | CTCAG | 7 cut(s) | 736, 987, 1307, 1523, 1785, 1836, 1894 |
| BseNI | ACTGG | 3 cut(s) | 925, 2214, 2718 |
| BseRI | GAGGAG | 2 cut(s) | 2030, 2315 |
| BseSI | GKGCMC | 1 cut(s) | 1054 |
| BseXI | GCAGC | 3 cut(s) | 1958, 2243, 3006 |
| BsgI | GTGCAG | 5 cut(s) | 692, 2610, 2694, 2821, 2923 |
| Bsh1236I | CGCG | 1 cut(s) | 1056 |
| BshFI | GGCC | 4 cut(s) | 291, 2180, 2465, 2644 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1054, 1276, 2189, 2474 |
| BsiSI | CCGG | 5 cut(s) | 1371, 2135, 2181, 2420, 2466 |
| BslFI | GGGAC | 3 cut(s) | 20, 206, 867 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 809, 1099, 1100, 2978 |
| BsmAI | GTCTC | 5 cut(s) | 333, 1291, 1301, 1513, 1889 |
| BsmFI | GGGAC | 3 cut(s) | 20, 206, 867 |
| BsmI | GAATGC | 1 cut(s) | 11 |
| BsnI | GGCC | 4 cut(s) | 291, 2180, 2465, 2644 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1054, 1276, 1371, 2189, 2474 |
| Bsp13I | TCCGGA | 2 cut(s) | 2134, 2419 |
| Bsp1407I | TGTACA | 1 cut(s) | 847 |
| Bsp143I | GATC | 8 cut(s) | 55, 118, 261, 1028, 1089, 2169, 2682, 3064 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1407 |
| BspACI | CCGC | 7 cut(s) | 159, 395, 419, 443, 513, 1348, 1930 |
| BspANI | GGCC | 4 cut(s) | 291, 2180, 2465, 2644 |
| BspCNI | CTCAG | 7 cut(s) | 735, 986, 1306, 1524, 1786, 1837, 1893 |
| BspEI | TCCGGA | 2 cut(s) | 2134, 2419 |
| BspFNI | CGCG | 1 cut(s) | 1056 |
| BspHI | TCATGA | 3 cut(s) | 1396, 1597, 2932 |
| BspLI | GGNNCC | 5 cut(s) | 36, 57, 306, 1368, 1720 |
| BspPI | GGATC | 6 cut(s) | 50, 63, 113, 1036, 1084, 2177 |
| BspQI | GCTCTTC | 1 cut(s) | 915 |
| BspTI | CTTAAG | 1 cut(s) | 1913 |
| BsrBI | CCGCTC | 1 cut(s) | 161 |
| BsrDI | GCAATG | 5 cut(s) | 531, 577, 1170, 2746, 2780 |
| BsrGI | TGTACA | 1 cut(s) | 847 |
| BsrI | ACTGG | 3 cut(s) | 925, 2214, 2718 |
| BssECI | CCNNGG | 1 cut(s) | 341 |
| BssMI | GATC | 8 cut(s) | 55, 118, 261, 1028, 1089, 2169, 2682, 3064 |
| BssNI | GRCGYC | 1 cut(s) | 1393 |
| BssT1I | CCWWGG | 1 cut(s) | 341 |
| Bst2UI | CCWGG | 1 cut(s) | 293 |
| Bst6I | CTCTTC | 3 cut(s) | 132, 915, 1511 |
| BstACI | GRCGYC | 1 cut(s) | 1393 |
| BstAFI | CTTAAG | 1 cut(s) | 1913 |
| BstAUI | TGTACA | 1 cut(s) | 847 |
| BstC8I | GCNNGC | 4 cut(s) | 1054, 2585, 2826, 2875 |
| BstFNI | CGCG | 1 cut(s) | 1056 |
| BstKTI | GATC | 8 cut(s) | 58, 121, 264, 1031, 1092, 2172, 2685, 3067 |
| BstMAI | GTCTC | 5 cut(s) | 333, 1291, 1301, 1513, 1889 |
| BstMBI | GATC | 8 cut(s) | 55, 118, 261, 1028, 1089, 2169, 2682, 3064 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 519, 690, 1684, 2026, 2086, 2311, 2371 |
| BstNI | CCWGG | 1 cut(s) | 293 |
| BstNSI | RCATGY | 1 cut(s) | 1179 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 198 |
| BstSCI | CCNGG | 4 cut(s) | 291, 1369, 2180, 2465 |
| BstSFI | CTRYAG | 2 cut(s) | 1322, 1434 |
| BstSLI | GKGCMC | 1 cut(s) | 1054 |
| BstUI | CGCG | 1 cut(s) | 1056 |
| BstV1I | GCAGC | 3 cut(s) | 1958, 2243, 3006 |
| BstV2I | GAAGAC | 4 cut(s) | 1381, 2123, 2408, 2769 |
| BstX2I | RGATCY | 4 cut(s) | 55, 1028, 1089, 2169 |
| BstYI | RGATCY | 4 cut(s) | 55, 1028, 1089, 2169 |
| BsuI | GTATCC | 1 cut(s) | 1619 |
| BsuRI | GGCC | 4 cut(s) | 291, 2180, 2465, 2644 |
| BtrI | CACGTC | 2 cut(s) | 200, 1483 |
| BtsIMutI | CAGTG | 5 cut(s) | 139, 1243, 1494, 2711, 3051 |
| Cac8I | GCNNGC | 4 cut(s) | 1054, 2585, 2826, 2875 |
| CciI | TCATGA | 3 cut(s) | 1396, 1597, 2932 |
| Cfr13I | GGNCC | 3 cut(s) | 34, 156, 2524 |
| CseI | GACGC | 3 cut(s) | 1382, 1386, 1508 |
| Csp6I | GTAC | 5 cut(s) | 143, 626, 848, 961, 1833 |
| CviAII | CATG | 9 cut(s) | 10, 110, 1176, 1313, 1397, 1598, 2606, 2640, 2933 |
| CviQI | GTAC | 5 cut(s) | 143, 626, 848, 961, 1833 |
| DpnI | GATC | 8 cut(s) | 57, 120, 263, 1030, 1091, 2171, 2684, 3066 |
| DpnII | GATC | 8 cut(s) | 55, 118, 261, 1028, 1089, 2169, 2682, 3064 |
| EaeI | YGGCCR | 3 cut(s) | 2178, 2463, 2642 |
| Eam1104I | CTCTTC | 3 cut(s) | 132, 915, 1511 |
| EarI | CTCTTC | 3 cut(s) | 132, 915, 1511 |
| EciI | GGCGGA | 3 cut(s) | 410, 458, 1337 |
| Ecl136II | GAGCTC | 1 cut(s) | 1274 |
| Eco130I | CCWWGG | 1 cut(s) | 341 |
| Eco24I | GRGCYC | 2 cut(s) | 1276, 1371 |
| Eco47I | GGWCC | 3 cut(s) | 34, 156, 2524 |
| Eco53kI | GAGCTC | 1 cut(s) | 1274 |
| Eco57I | CTGAAG | 5 cut(s) | 114, 919, 1793, 2102, 2387 |
| EcoICRI | GAGCTC | 1 cut(s) | 1274 |
| EcoRI | GAATTC | 4 cut(s) | 1104, 1536, 1742, 2654 |
| EcoRII | CCWGG | 1 cut(s) | 291 |
| EcoT14I | CCWWGG | 1 cut(s) | 341 |
| EcoT22I | ATGCAT | 1 cut(s) | 11 |
| EcoT38I | GRGCYC | 2 cut(s) | 1276, 1371 |
| ErhI | CCWWGG | 1 cut(s) | 341 |
| FaeI | CATG | 9 cut(s) | 13, 113, 1179, 1316, 1400, 1601, 2609, 2643, 2936 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 627, 659 |
| FaqI | GGGAC | 3 cut(s) | 20, 206, 867 |
| FatI | CATG | 9 cut(s) | 9, 109, 1175, 1312, 1396, 1597, 2605, 2639, 2932 |
| FauI | CCCGC | 2 cut(s) | 412, 1937 |
| FbaI | TGATCA | 2 cut(s) | 261, 2682 |
| Fnu4HI | GCNGC | 4 cut(s) | 514, 1972, 2257, 3020 |
| FriOI | GRGCYC | 2 cut(s) | 1276, 1371 |
| Fsp4HI | GCNGC | 4 cut(s) | 514, 1972, 2257, 3020 |
| GluI | GCNGC | 4 cut(s) | 514, 1972, 2257, 3020 |
| GsuI | CTGGAG | 1 cut(s) | 672 |
| HaeIII | GGCC | 4 cut(s) | 291, 2180, 2465, 2644 |
| HapII | CCGG | 5 cut(s) | 1371, 2135, 2181, 2420, 2466 |
| HgaI | GACGC | 3 cut(s) | 1382, 1386, 1508 |
| Hin1I | GRCGYC | 1 cut(s) | 1393 |
| Hin1II | CATG | 9 cut(s) | 13, 113, 1179, 1316, 1400, 1601, 2609, 2643, 2936 |
| HincII | GTYRAC | 2 cut(s) | 1267, 1419 |
| HindII | GTYRAC | 2 cut(s) | 1267, 1419 |
| HindIII | AAGCTT | 4 cut(s) | 96, 221, 1126, 2871 |
| HinfI | GANTC | 8 cut(s) | 194, 326, 654, 825, 1137, 1145, 1355, 1666 |
| HpaI | GTTAAC | 1 cut(s) | 1419 |
| HpaII | CCGG | 5 cut(s) | 1371, 2135, 2181, 2420, 2466 |
| HphI | GGTGA | 5 cut(s) | 434, 824, 1281, 2024, 2309 |
| Hpy166II | GTNNAC | 7 cut(s) | 74, 626, 760, 1052, 1267, 1419, 1562 |
| Hpy8I | GTNNAC | 7 cut(s) | 74, 626, 760, 1052, 1267, 1419, 1562 |
| Hpy99I | CGWCG | 1 cut(s) | 2566 |
| HpyAV | CCTTC | 9 cut(s) | 596, 786, 813, 943, 1442, 1709, 1820, 2537, 2753 |
| HpyCH4IV | ACGT | 4 cut(s) | 199, 594, 1482, 2575 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 519, 690, 1684, 2026, 2086, 2311, 2371 |
| HpySE526I | ACGT | 4 cut(s) | 199, 594, 1482, 2575 |
| Hsp92I | GRCGYC | 1 cut(s) | 1393 |
| Hsp92II | CATG | 9 cut(s) | 13, 113, 1179, 1316, 1400, 1601, 2609, 2643, 2936 |
| Kpn2I | TCCGGA | 2 cut(s) | 2134, 2419 |
| Ksp22I | TGATCA | 2 cut(s) | 261, 2682 |
| KspAI | GTTAAC | 1 cut(s) | 1419 |
| Kzo9I | GATC | 8 cut(s) | 55, 118, 261, 1028, 1089, 2169, 2682, 3064 |
| LguI | GCTCTTC | 1 cut(s) | 915 |
| LmnI | GCTCC | 7 cut(s) | 310, 1366, 2017, 2026, 2302, 2311, 2865 |
| Lsp1109I | GCAGC | 3 cut(s) | 1958, 2243, 3006 |
| LweI | GCATC | 5 cut(s) | 205, 621, 1393, 2917, 2981 |
| MaeII | ACGT | 4 cut(s) | 199, 594, 1482, 2575 |
| MaeIII | GTNAC | 7 cut(s) | 113, 698, 1279, 1757, 2483, 2571, 2732 |
| MalI | GATC | 8 cut(s) | 57, 120, 263, 1030, 1091, 2171, 2684, 3066 |
| MbiI | CCGCTC | 1 cut(s) | 161 |
| MboI | GATC | 8 cut(s) | 55, 118, 261, 1028, 1089, 2169, 2682, 3064 |
| MfeI | CAATTG | 2 cut(s) | 2070, 2864 |
| MflI | RGATCY | 4 cut(s) | 55, 1028, 1089, 2169 |
| MhlI | GDGCHC | 5 cut(s) | 1054, 1276, 1371, 2189, 2474 |
| MlsI | TGGCCA | 1 cut(s) | 2644 |
| MluNI | TGGCCA | 1 cut(s) | 2644 |
| MlyI | GAGTC | 5 cut(s) | 188, 335, 663, 1131, 1364 |
| MmeI | TCCRAC | 7 cut(s) | 277, 1053, 1440, 1719, 1949, 2234, 2727 |
| Mox20I | TGGCCA | 1 cut(s) | 2644 |
| Mph1103I | ATGCAT | 1 cut(s) | 11 |
| MroI | TCCGGA | 2 cut(s) | 2134, 2419 |
| MroXI | GAANNNNTTC | 2 cut(s) | 642, 909 |
| MscI | TGGCCA | 1 cut(s) | 2644 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1057, 1401, 1545, 1619, 1937, 2610 |
| Msp20I | TGGCCA | 1 cut(s) | 2644 |
| MspA1I | CMGCKG | 1 cut(s) | 3019 |
| MspCI | CTTAAG | 1 cut(s) | 1913 |
| MspI | CCGG | 5 cut(s) | 1371, 2135, 2181, 2420, 2466 |
| MspR9I | CCNGG | 4 cut(s) | 293, 1371, 2182, 2467 |
| MunI | CAATTG | 2 cut(s) | 2070, 2864 |
| Mva1269I | GAATGC | 1 cut(s) | 11 |
| MvaI | CCWGG | 1 cut(s) | 293 |
| MvnI | CGCG | 1 cut(s) | 1056 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 519, 690, 1684, 2026, 2086, 2311, 2371 |
| NciI | CCSGG | 3 cut(s) | 1371, 2182, 2467 |
| NdeII | GATC | 8 cut(s) | 55, 118, 261, 1028, 1089, 2169, 2682, 3064 |
| NlaIII | CATG | 9 cut(s) | 13, 113, 1179, 1316, 1400, 1601, 2609, 2643, 2936 |
| NlaIV | GGNNCC | 5 cut(s) | 36, 57, 306, 1368, 1720 |
| NmuCI | GTSAC | 2 cut(s) | 113, 1757 |
| NsiI | ATGCAT | 1 cut(s) | 11 |
| NspI | RCATGY | 1 cut(s) | 1179 |
| OliI | CACNNNNGTG | 1 cut(s) | 1057 |
| PagI | TCATGA | 3 cut(s) | 1396, 1597, 2932 |
| PciSI | GCTCTTC | 1 cut(s) | 915 |
| PctI | GAATGC | 1 cut(s) | 11 |
| PdmI | GAANNNNTTC | 2 cut(s) | 642, 909 |
| PfeI | GAWTC | 3 cut(s) | 825, 1145, 1666 |
| PflFI | GACNNNGTC | 1 cut(s) | 2426 |
| PkrI | GCNGC | 4 cut(s) | 515, 1973, 2258, 3021 |
| PleI | GAGTC | 5 cut(s) | 188, 334, 662, 1131, 1363 |
| PpsI | GAGTC | 5 cut(s) | 188, 334, 662, 1131, 1363 |
| PshAI | GACNNNNGTC | 1 cut(s) | 198 |
| PshBI | ATTAAT | 2 cut(s) | 983, 1803 |
| PsiI | TTATAA | 1 cut(s) | 833 |
| Psp124BI | GAGCTC | 1 cut(s) | 1276 |
| Psp6I | CCWGG | 1 cut(s) | 291 |
| PspGI | CCWGG | 1 cut(s) | 291 |
| PspN4I | GGNNCC | 5 cut(s) | 36, 57, 306, 1368, 1720 |
| PspPI | GGNCC | 3 cut(s) | 34, 156, 2524 |
| PsuI | RGATCY | 4 cut(s) | 55, 1028, 1089, 2169 |
| PsyI | GACNNNGTC | 1 cut(s) | 2426 |
| PvuII | CAGCTG | 1 cut(s) | 3019 |
| RsaI | GTAC | 5 cut(s) | 144, 627, 849, 962, 1834 |
| RsaNI | GTAC | 5 cut(s) | 143, 626, 848, 961, 1833 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1057, 1401, 1545, 1619, 1937, 2610 |
| SacI | GAGCTC | 1 cut(s) | 1276 |
| SapI | GCTCTTC | 1 cut(s) | 915 |
| SatI | GCNGC | 4 cut(s) | 514, 1972, 2257, 3020 |
| Sau3AI | GATC | 8 cut(s) | 55, 118, 261, 1028, 1089, 2169, 2682, 3064 |
| Sau96I | GGNCC | 3 cut(s) | 34, 156, 2524 |
| ScaI | AGTACT | 1 cut(s) | 962 |
| SchI | GAGTC | 5 cut(s) | 188, 335, 663, 1131, 1364 |
| ScrFI | CCNGG | 4 cut(s) | 293, 1371, 2182, 2467 |
| SduI | GDGCHC | 5 cut(s) | 1054, 1276, 1371, 2189, 2474 |
| SfaNI | GCATC | 5 cut(s) | 205, 621, 1393, 2917, 2981 |
| SfcI | CTRYAG | 2 cut(s) | 1322, 1434 |
| SinI | GGWCC | 3 cut(s) | 34, 156, 2524 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1057, 1401, 1545, 1619, 1937, 2610 |
| SmlI | CTYRAG | 4 cut(s) | 77, 996, 1913, 2908 |
| SmoI | CTYRAG | 4 cut(s) | 77, 996, 1913, 2908 |
| SpeI | ACTAGT | 1 cut(s) | 1835 |
| SsiI | CCGC | 7 cut(s) | 159, 395, 419, 443, 513, 1348, 1930 |
| SspI | AATATT | 1 cut(s) | 2790 |
| SstI | GAGCTC | 1 cut(s) | 1276 |
| StyD4I | CCNGG | 4 cut(s) | 291, 1369, 2180, 2465 |
| StyI | CCWWGG | 1 cut(s) | 341 |
| TaiI | ACGT | 4 cut(s) | 202, 597, 1485, 2578 |
| TaqI | TCGA | 1 cut(s) | 1140 |
| TatI | WGTACW | 4 cut(s) | 625, 847, 960, 1832 |
| TauI | GCSGC | 1 cut(s) | 516 |
| TfiI | GAWTC | 3 cut(s) | 825, 1145, 1666 |
| TscAI | CASTG | 5 cut(s) | 139, 1250, 1501, 2718, 3051 |
| TseFI | GTSAC | 2 cut(s) | 113, 1757 |
| TseI | GCWGC | 3 cut(s) | 1971, 2256, 3019 |
| Tsp45I | GTSAC | 2 cut(s) | 113, 1757 |
| TspRI | CASTG | 5 cut(s) | 139, 1250, 1501, 2718, 3051 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2426 |
| Vha464I | CTTAAG | 1 cut(s) | 1913 |
| VneI | GTGCAC | 1 cut(s) | 1050 |
| VpaK11BI | GGWCC | 3 cut(s) | 34, 156, 2524 |
| VspI | ATTAAT | 2 cut(s) | 983, 1803 |
| XapI | RAATTY | 5 cut(s) | 566, 1104, 1536, 1742, 2654 |
| XbaI | TCTAGA | 2 cut(s) | 1165, 2509 |
| XceI | RCATGY | 1 cut(s) | 1179 |
| XmaJI | CCTAGG | 1 cut(s) | 341 |
| XmnI | GAANNNNTTC | 2 cut(s) | 642, 909 |
| ZrmI | AGTACT | 1 cut(s) | 962 |
| Zsp2I | ATGCAT | 1 cut(s) | 11 |