TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NIF | PF03031 | 96 - 278 | 1.6e-39 | NLI interacting factor-like phosphatase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 844 |
| AciI | CCGC | 3 cut(s) | 222, 225, 234 |
| AclWI | GGATC | 2 cut(s) | 266, 654 |
| AcoI | YGGCCR | 2 cut(s) | 3, 124 |
| AcsI | RAATTY | 1 cut(s) | 732 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 664, 728 |
| AhlI | ACTAGT | 1 cut(s) | 896 |
| AjiI | CACGTC | 1 cut(s) | 829 |
| AjnI | CCWGG | 1 cut(s) | 303 |
| AluBI | AGCT | 5 cut(s) | 117, 286, 342, 397, 778 |
| AluI | AGCT | 5 cut(s) | 117, 286, 342, 397, 778 |
| Alw21I | GWGCWC | 2 cut(s) | 213, 399 |
| Alw26I | GTCTC | 2 cut(s) | 305, 826 |
| AlwI | GGATC | 2 cut(s) | 266, 654 |
| Ama87I | CYCGRG | 1 cut(s) | 398 |
| AoxI | GGCC | 5 cut(s) | 3, 124, 605, 655, 673 |
| ApeKI | GCWGC | 1 cut(s) | 475 |
| ApoI | RAATTY | 1 cut(s) | 732 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 584, 870, 889 |
| AspLEI | GCGC | 1 cut(s) | 841 |
| AspS9I | GGNCC | 1 cut(s) | 673 |
| AsuC2I | CCSGG | 2 cut(s) | 348, 471 |
| AsuHPI | GGTGA | 1 cut(s) | 454 |
| AvaI | CYCGRG | 1 cut(s) | 398 |
| BanII | GRGCYC | 1 cut(s) | 399 |
| Bbv12I | GWGCWC | 2 cut(s) | 213, 399 |
| BbvI | GCAGC | 1 cut(s) | 462 |
| BccI | CCATC | 2 cut(s) | 138, 422 |
| BceAI | ACGGC | 2 cut(s) | 212, 221 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 315, 349 |
| BciT130I | CCWGG | 1 cut(s) | 305 |
| BciVI | GTATCC | 1 cut(s) | 241 |
| BcnI | CCSGG | 2 cut(s) | 348, 471 |
| BcoDI | GTCTC | 2 cut(s) | 305, 826 |
| BcuI | ACTAGT | 1 cut(s) | 896 |
| BfaI | CTAG | 1 cut(s) | 897 |
| BfmI | CTRYAG | 1 cut(s) | 818 |
| BfuAI | ACCTGC | 1 cut(s) | 844 |
| BfuI | GTATCC | 1 cut(s) | 241 |
| BglII | AGATCT | 1 cut(s) | 96 |
| BisI | GCNGC | 2 cut(s) | 225, 476 |
| BlsI | GCNGC | 2 cut(s) | 226, 477 |
| Bme1390I | CCNGG | 3 cut(s) | 305, 348, 471 |
| BmeT110I | CYCGRG | 1 cut(s) | 398 |
| BmgBI | CACGTC | 1 cut(s) | 829 |
| BmgT120I | GGNCC | 1 cut(s) | 673 |
| BmrFI | CCNGG | 3 cut(s) | 305, 348, 471 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 200, 232 |
| BpuEI | CTTGAG | 1 cut(s) | 788 |
| BpuMI | CCSGG | 2 cut(s) | 348, 471 |
| Bsa29I | ATCGAT | 1 cut(s) | 246 |
| BsaI | GGTCTC | 1 cut(s) | 826 |
| BsaJI | CCNNGG | 2 cut(s) | 347, 470 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 664, 728 |
| Bse118I | RCCGGY | 1 cut(s) | 190 |
| BseBI | CCWGG | 1 cut(s) | 305 |
| BseCI | ATCGAT | 1 cut(s) | 246 |
| BseDI | CCNNGG | 2 cut(s) | 347, 470 |
| BseGI | GGATG | 4 cut(s) | 130, 155, 313, 790 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 664, 728 |
| BseMII | CTCAG | 1 cut(s) | 29 |
| BseXI | GCAGC | 1 cut(s) | 462 |
| BseYI | CCCAGC | 2 cut(s) | 79, 755 |
| BshFI | GGCC | 5 cut(s) | 5, 126, 607, 657, 675 |
| BshVI | ATCGAT | 1 cut(s) | 246 |
| BsiHKAI | GWGCWC | 2 cut(s) | 213, 399 |
| BsiHKCI | CYCGRG | 1 cut(s) | 398 |
| BsiSI | CCGG | 3 cut(s) | 191, 347, 470 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 664, 728 |
| BsmAI | GTCTC | 2 cut(s) | 305, 826 |
| BsmBI | CGTCTC | 1 cut(s) | 305 |
| BsmI | GAATGC | 1 cut(s) | 741 |
| BsnI | GGCC | 5 cut(s) | 5, 126, 607, 657, 675 |
| Bso31I | GGTCTC | 1 cut(s) | 826 |
| BsoBI | CYCGRG | 1 cut(s) | 398 |
| Bsp1286I | GDGCHC | 2 cut(s) | 213, 399 |
| Bsp143I | GATC | 4 cut(s) | 96, 271, 511, 646 |
| BspACI | CCGC | 3 cut(s) | 222, 225, 234 |
| BspANI | GGCC | 5 cut(s) | 5, 126, 607, 657, 675 |
| BspCNI | CTCAG | 1 cut(s) | 28 |
| BspDI | ATCGAT | 1 cut(s) | 246 |
| BspMI | ACCTGC | 1 cut(s) | 844 |
| BspPI | GGATC | 2 cut(s) | 266, 654 |
| BspTNI | GGTCTC | 1 cut(s) | 826 |
| BsrFI | RCCGGY | 1 cut(s) | 190 |
| BssAI | RCCGGY | 1 cut(s) | 190 |
| BssECI | CCNNGG | 2 cut(s) | 347, 470 |
| BssMI | GATC | 4 cut(s) | 96, 271, 511, 646 |
| Bst2UI | CCWGG | 1 cut(s) | 305 |
| Bst4CI | ACNGT | 3 cut(s) | 292, 457, 632 |
| Bst6I | CTCTTC | 3 cut(s) | 148, 166, 223 |
| BstC8I | GCNNGC | 4 cut(s) | 192, 340, 344, 366 |
| BstDEI | CTNAG | 1 cut(s) | 15 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 662 |
| BstF5I | GGATG | 4 cut(s) | 130, 155, 313, 790 |
| BstHHI | GCGC | 1 cut(s) | 841 |
| BstKTI | GATC | 4 cut(s) | 99, 274, 514, 649 |
| BstMAI | GTCTC | 2 cut(s) | 305, 826 |
| BstMBI | GATC | 4 cut(s) | 96, 271, 511, 646 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 76, 123, 233, 472, 604, 814 |
| BstNI | CCWGG | 1 cut(s) | 305 |
| BstNSI | RCATGY | 2 cut(s) | 641, 862 |
| BstSCI | CCNGG | 3 cut(s) | 303, 346, 469 |
| BstSFI | CTRYAG | 1 cut(s) | 818 |
| BstV1I | GCAGC | 1 cut(s) | 462 |
| BstX2I | RGATCY | 2 cut(s) | 96, 646 |
| BstYI | RGATCY | 2 cut(s) | 96, 646 |
| Bsu15I | ATCGAT | 1 cut(s) | 246 |
| BsuI | GTATCC | 1 cut(s) | 241 |
| BsuRI | GGCC | 5 cut(s) | 5, 126, 607, 657, 675 |
| BsuTUI | ATCGAT | 1 cut(s) | 246 |
| BtrI | CACGTC | 1 cut(s) | 829 |
| BtsCI | GGATG | 4 cut(s) | 130, 155, 313, 790 |
| BtsI | GCAGTG | 1 cut(s) | 797 |
| BtsIMutI | CAGTG | 1 cut(s) | 797 |
| BveI | ACCTGC | 1 cut(s) | 844 |
| Cac8I | GCNNGC | 4 cut(s) | 192, 340, 344, 366 |
| CfoI | GCGC | 1 cut(s) | 841 |
| Cfr10I | RCCGGY | 1 cut(s) | 190 |
| Cfr13I | GGNCC | 1 cut(s) | 673 |
| ClaI | ATCGAT | 1 cut(s) | 246 |
| CseI | GACGC | 4 cut(s) | 179, 322, 370, 455 |
| CviAII | CATG | 6 cut(s) | 479, 500, 638, 712, 767, 859 |
| DdeI | CTNAG | 1 cut(s) | 15 |
| DpnI | GATC | 4 cut(s) | 98, 273, 513, 648 |
| DpnII | GATC | 4 cut(s) | 96, 271, 511, 646 |
| EaeI | YGGCCR | 2 cut(s) | 3, 124 |
| Eam1104I | CTCTTC | 3 cut(s) | 148, 166, 223 |
| EarI | CTCTTC | 3 cut(s) | 148, 166, 223 |
| EciI | GGCGGA | 2 cut(s) | 211, 223 |
| Ecl136II | GAGCTC | 1 cut(s) | 397 |
| Eco24I | GRGCYC | 1 cut(s) | 399 |
| Eco31I | GGTCTC | 1 cut(s) | 826 |
| Eco53kI | GAGCTC | 1 cut(s) | 397 |
| Eco88I | CYCGRG | 1 cut(s) | 398 |
| EcoICRI | GAGCTC | 1 cut(s) | 397 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 662 |
| EcoRI | GAATTC | 1 cut(s) | 732 |
| EcoRII | CCWGG | 1 cut(s) | 303 |
| EcoT38I | GRGCYC | 1 cut(s) | 399 |
| Esp3I | CGTCTC | 1 cut(s) | 305 |
| FaeI | CATG | 6 cut(s) | 482, 503, 641, 715, 770, 862 |
| FatI | CATG | 6 cut(s) | 478, 499, 637, 711, 766, 858 |
| FauNDI | CATATG | 1 cut(s) | 328 |
| Fnu4HI | GCNGC | 2 cut(s) | 225, 476 |
| FokI | GGATG | 4 cut(s) | 117, 142, 320, 797 |
| FriOI | GRGCYC | 1 cut(s) | 399 |
| Fsp4HI | GCNGC | 2 cut(s) | 225, 476 |
| FspBI | CTAG | 1 cut(s) | 897 |
| GlaI | GCGC | 1 cut(s) | 840 |
| GluI | GCNGC | 2 cut(s) | 225, 476 |
| GsaI | CCCAGC | 2 cut(s) | 83, 759 |
| HaeIII | GGCC | 5 cut(s) | 5, 126, 607, 657, 675 |
| HapII | CCGG | 3 cut(s) | 191, 347, 470 |
| HgaI | GACGC | 4 cut(s) | 179, 322, 370, 455 |
| HhaI | GCGC | 1 cut(s) | 841 |
| Hin1II | CATG | 6 cut(s) | 482, 503, 641, 715, 770, 862 |
| Hin6I | GCGC | 1 cut(s) | 839 |
| HinP1I | GCGC | 1 cut(s) | 839 |
| HincII | GTYRAC | 3 cut(s) | 12, 562, 691 |
| HindII | GTYRAC | 3 cut(s) | 12, 562, 691 |
| HinfI | GANTC | 6 cut(s) | 13, 215, 257, 263, 332, 885 |
| HpaII | CCGG | 3 cut(s) | 191, 347, 470 |
| HphI | GGTGA | 1 cut(s) | 454 |
| Hpy166II | GTNNAC | 4 cut(s) | 12, 525, 562, 691 |
| Hpy188I | TCNGA | 6 cut(s) | 18, 169, 262, 268, 360, 415 |
| Hpy188III | TCNNGA | 4 cut(s) | 94, 254, 299, 487 |
| Hpy8I | GTNNAC | 4 cut(s) | 12, 525, 562, 691 |
| Hpy99I | CGWCG | 2 cut(s) | 173, 272 |
| HpyAV | CCTTC | 7 cut(s) | 55, 187, 368, 433, 533, 618, 900 |
| HpyCH4III | ACNGT | 3 cut(s) | 292, 457, 632 |
| HpyCH4IV | ACGT | 2 cut(s) | 573, 828 |
| HpyCH4V | TGCA | 6 cut(s) | 52, 205, 326, 478, 718, 741 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 76, 123, 233, 472, 604, 814 |
| HpyF3I | CTNAG | 1 cut(s) | 15 |
| HpySE526I | ACGT | 2 cut(s) | 573, 828 |
| Hsp92II | CATG | 6 cut(s) | 482, 503, 641, 715, 770, 862 |
| HspAI | GCGC | 1 cut(s) | 839 |
| KroI | GCCGGC | 1 cut(s) | 190 |
| KroNI | GCCGGC | 1 cut(s) | 192 |
| Kzo9I | GATC | 4 cut(s) | 96, 271, 511, 646 |
| LmnI | GCTCC | 1 cut(s) | 208 |
| Lsp1109I | GCAGC | 1 cut(s) | 462 |
| MaeI | CTAG | 1 cut(s) | 897 |
| MaeII | ACGT | 2 cut(s) | 573, 828 |
| MaeIII | GTNAC | 1 cut(s) | 451 |
| MalI | GATC | 4 cut(s) | 98, 273, 513, 648 |
| MboI | GATC | 4 cut(s) | 96, 271, 511, 646 |
| MflI | RGATCY | 2 cut(s) | 96, 646 |
| MhlI | GDGCHC | 2 cut(s) | 213, 399 |
| MluCI | AATT | 4 cut(s) | 73, 445, 678, 732 |
| MlyI | GAGTC | 4 cut(s) | 7, 209, 257, 341 |
| MmeI | TCCRAC | 3 cut(s) | 192, 291, 881 |
| MnlI | CCTC | 4 cut(s) | 16, 169, 285, 843 |
| MroNI | GCCGGC | 1 cut(s) | 190 |
| MroXI | GAANNNNTTC | 3 cut(s) | 584, 870, 889 |
| MspI | CCGG | 3 cut(s) | 191, 347, 470 |
| MspR9I | CCNGG | 3 cut(s) | 305, 348, 471 |
| Mva1269I | GAATGC | 1 cut(s) | 741 |
| MvaI | CCWGG | 1 cut(s) | 305 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 76, 123, 233, 472, 604, 814 |
| NaeI | GCCGGC | 1 cut(s) | 192 |
| NciI | CCSGG | 2 cut(s) | 348, 471 |
| NdeI | CATATG | 1 cut(s) | 328 |
| NdeII | GATC | 4 cut(s) | 96, 271, 511, 646 |
| NgoMIV | GCCGGC | 1 cut(s) | 190 |
| NlaIII | CATG | 6 cut(s) | 482, 503, 641, 715, 770, 862 |
| NmeAIII | GCCGAG | 2 cut(s) | 31, 102 |
| NspI | RCATGY | 2 cut(s) | 641, 862 |
| PaeR7I | CTCGAG | 1 cut(s) | 398 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 108, 252 |
| PctI | GAATGC | 1 cut(s) | 741 |
| PdiI | GCCGGC | 1 cut(s) | 192 |
| PdmI | GAANNNNTTC | 3 cut(s) | 584, 870, 889 |
| PfeI | GAWTC | 2 cut(s) | 257, 885 |
| PkrI | GCNGC | 2 cut(s) | 226, 477 |
| PleI | GAGTC | 4 cut(s) | 7, 209, 257, 340 |
| PpsI | GAGTC | 4 cut(s) | 7, 209, 257, 340 |
| Psp124BI | GAGCTC | 1 cut(s) | 399 |
| Psp6I | CCWGG | 1 cut(s) | 303 |
| PspFI | CCCAGC | 2 cut(s) | 79, 755 |
| PspGI | CCWGG | 1 cut(s) | 303 |
| PspPI | GGNCC | 1 cut(s) | 673 |
| PspXI | VCTCGAGB | 1 cut(s) | 398 |
| PsuI | RGATCY | 2 cut(s) | 96, 646 |
| SacI | GAGCTC | 1 cut(s) | 399 |
| SatI | GCNGC | 2 cut(s) | 225, 476 |
| Sau3AI | GATC | 4 cut(s) | 96, 271, 511, 646 |
| Sau96I | GGNCC | 1 cut(s) | 673 |
| SchI | GAGTC | 4 cut(s) | 7, 209, 257, 341 |
| ScrFI | CCNGG | 3 cut(s) | 305, 348, 471 |
| SduI | GDGCHC | 2 cut(s) | 213, 399 |
| SfcI | CTRYAG | 1 cut(s) | 818 |
| Sfr274I | CTCGAG | 1 cut(s) | 398 |
| SlaI | CTCGAG | 1 cut(s) | 398 |
| SmlI | CTYRAG | 2 cut(s) | 398, 803 |
| SmoI | CTYRAG | 2 cut(s) | 398, 803 |
| SpeI | ACTAGT | 1 cut(s) | 896 |
| Sse9I | AATT | 4 cut(s) | 73, 445, 678, 732 |
| SsiI | CCGC | 3 cut(s) | 222, 225, 234 |
| SspMI | CTAG | 1 cut(s) | 897 |
| SstI | GAGCTC | 1 cut(s) | 399 |
| StyD4I | CCNGG | 3 cut(s) | 303, 346, 469 |
| TaaI | ACNGT | 3 cut(s) | 292, 457, 632 |
| TaiI | ACGT | 2 cut(s) | 576, 831 |
| TaqI | TCGA | 3 cut(s) | 198, 246, 399 |
| TasI | AATT | 4 cut(s) | 73, 445, 678, 732 |
| TauI | GCSGC | 1 cut(s) | 227 |
| TfiI | GAWTC | 2 cut(s) | 257, 885 |
| TscAI | CASTG | 1 cut(s) | 804 |
| TseI | GCWGC | 1 cut(s) | 475 |
| TspDTI | ATGAA | 3 cut(s) | 144, 488, 700 |
| TspGWI | ACGGA | 2 cut(s) | 638, 726 |
| TspRI | CASTG | 1 cut(s) | 804 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 662 |
| XapI | RAATTY | 1 cut(s) | 732 |
| XceI | RCATGY | 2 cut(s) | 641, 862 |
| XhoI | CTCGAG | 1 cut(s) | 398 |
| XmnI | GAANNNNTTC | 3 cut(s) | 584, 870, 889 |
| XspI | CTAG | 1 cut(s) | 897 |