WRKY Transcription Factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 205 - 325 | 1.3e-19 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 552, 562 |
| Acc36I | ACCTGC | 1 cut(s) | 454 |
| Acc65I | GGTACC | 1 cut(s) | 1313 |
| AccB1I | GGYRCC | 1 cut(s) | 1313 |
| AccI | GTMKAC | 1 cut(s) | 108 |
| AccII | CGCG | 2 cut(s) | 31, 142 |
| AciI | CCGC | 3 cut(s) | 5, 29, 142 |
| AclWI | GGATC | 3 cut(s) | 27, 882, 1243 |
| AcoI | YGGCCR | 2 cut(s) | 1140, 1398 |
| AcuI | CTGAAG | 4 cut(s) | 141, 648, 978, 1275 |
| AfaI | GTAC | 5 cut(s) | 675, 790, 1296, 1315, 1466 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 871, 1149 |
| AflIII | ACRYGT | 1 cut(s) | 879 |
| AgsI | TTSAA | 8 cut(s) | 68, 329, 356, 406, 485, 643, 796, 923 |
| AjnI | CCWGG | 1 cut(s) | 1010 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 866, 898 |
| AluBI | AGCT | 8 cut(s) | 125, 418, 441, 494, 523, 871, 1125, 1446 |
| AluI | AGCT | 8 cut(s) | 125, 418, 441, 494, 523, 871, 1125, 1446 |
| Alw21I | GWGCWC | 2 cut(s) | 751, 996 |
| Alw26I | GTCTC | 3 cut(s) | 496, 615, 1206 |
| Alw44I | GTGCAC | 1 cut(s) | 992 |
| AlwI | GGATC | 3 cut(s) | 27, 882, 1243 |
| Ama87I | CYCGRG | 1 cut(s) | 37 |
| AoxI | GGCC | 4 cut(s) | 41, 1140, 1384, 1398 |
| ApaLI | GTGCAC | 1 cut(s) | 992 |
| ApeKI | GCWGC | 1 cut(s) | 449 |
| AseI | ATTAAT | 1 cut(s) | 537 |
| Asp718I | GGTACC | 1 cut(s) | 1313 |
| AspA2I | CCTAGG | 1 cut(s) | 886 |
| AspLEI | GCGC | 2 cut(s) | 553, 563 |
| AspS9I | GGNCC | 2 cut(s) | 41, 1254 |
| AsuC2I | CCSGG | 3 cut(s) | 38, 39, 618 |
| AsuHPI | GGTGA | 2 cut(s) | 302, 821 |
| AvaI | CYCGRG | 1 cut(s) | 37 |
| AvaII | GGWCC | 1 cut(s) | 1254 |
| AvrII | CCTAGG | 1 cut(s) | 886 |
| BaeGI | GKGCMC | 1 cut(s) | 996 |
| BalI | TGGCCA | 2 cut(s) | 1142, 1400 |
| BanI | GGYRCC | 1 cut(s) | 1313 |
| BanII | GRGCYC | 2 cut(s) | 23, 1054 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 646, 678 |
| BbsI | GAAGAC | 2 cut(s) | 455, 1281 |
| Bbv12I | GWGCWC | 2 cut(s) | 751, 996 |
| BbvI | GCAGC | 1 cut(s) | 461 |
| BccI | CCATC | 8 cut(s) | 204, 307, 374, 635, 654, 1355, 1390, 1409 |
| BceAI | ACGGC | 1 cut(s) | 494 |
| BciT130I | CCWGG | 1 cut(s) | 1012 |
| BcnI | CCSGG | 3 cut(s) | 38, 39, 618 |
| BcoDI | GTCTC | 3 cut(s) | 496, 615, 1206 |
| BfaI | CTAG | 3 cut(s) | 80, 887, 1304 |
| BfmI | CTRYAG | 2 cut(s) | 54, 447 |
| BfuAI | ACCTGC | 1 cut(s) | 454 |
| BisI | GCNGC | 2 cut(s) | 143, 450 |
| BlnI | CCTAGG | 1 cut(s) | 886 |
| BlsI | GCNGC | 2 cut(s) | 144, 451 |
| Bme1390I | CCNGG | 4 cut(s) | 38, 39, 618, 1012 |
| Bme18I | GGWCC | 1 cut(s) | 1254 |
| BmeT110I | CYCGRG | 1 cut(s) | 37 |
| BmgT120I | GGNCC | 2 cut(s) | 41, 1254 |
| BmiI | GGNNCC | 6 cut(s) | 42, 373, 863, 1051, 1255, 1315 |
| BmrFI | CCNGG | 4 cut(s) | 38, 39, 618, 1012 |
| BmsI | GCATC | 5 cut(s) | 49, 536, 538, 770, 1044 |
| BpiI | GAAGAC | 2 cut(s) | 455, 1281 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1205, 1237 |
| BpmI | CTGGAG | 1 cut(s) | 851 |
| BpuMI | CCSGG | 3 cut(s) | 38, 39, 618 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1400 |
| BsaI | GGTCTC | 1 cut(s) | 1206 |
| BsaJI | CCNNGG | 7 cut(s) | 36, 37, 38, 375, 886, 899, 1257 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1170, 1200 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 871, 1149 |
| Bse1I | ACTGG | 2 cut(s) | 935, 1143 |
| Bse3DI | GCAATG | 1 cut(s) | 459 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1400 |
| BseBI | CCWGG | 1 cut(s) | 1012 |
| BseDI | CCNNGG | 7 cut(s) | 36, 37, 38, 375, 886, 899, 1257 |
| BseGI | GGATG | 7 cut(s) | 95, 196, 299, 385, 627, 1401, 1439 |
| BseJI | GATNNNNATC | 1 cut(s) | 1400 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 871, 1149 |
| BseMI | GCAATG | 1 cut(s) | 459 |
| BseMII | CTCAG | 2 cut(s) | 215, 1215 |
| BseNI | ACTGG | 2 cut(s) | 935, 1143 |
| BseSI | GKGCMC | 1 cut(s) | 996 |
| BseXI | GCAGC | 1 cut(s) | 461 |
| BseYI | CCCAGC | 1 cut(s) | 1101 |
| BsgI | GTGCAG | 2 cut(s) | 442, 1208 |
| Bsh1236I | CGCG | 2 cut(s) | 31, 142 |
| BshFI | GGCC | 4 cut(s) | 43, 1142, 1386, 1400 |
| BshNI | GGYRCC | 1 cut(s) | 1313 |
| BsiHKAI | GWGCWC | 2 cut(s) | 751, 996 |
| BsiHKCI | CYCGRG | 1 cut(s) | 37 |
| BsiSI | CCGG | 3 cut(s) | 38, 618, 1205 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 871, 1149 |
| BsmAI | GTCTC | 3 cut(s) | 496, 615, 1206 |
| BsnI | GGCC | 4 cut(s) | 43, 1142, 1386, 1400 |
| Bso31I | GGTCTC | 1 cut(s) | 1206 |
| BsoBI | CYCGRG | 1 cut(s) | 37 |
| Bsp1286I | GDGCHC | 4 cut(s) | 23, 751, 996, 1054 |
| Bsp143I | GATC | 3 cut(s) | 32, 874, 1235 |
| Bsp19I | CCATGG | 1 cut(s) | 899 |
| BspACI | CCGC | 3 cut(s) | 5, 29, 142 |
| BspANI | GGCC | 4 cut(s) | 43, 1142, 1386, 1400 |
| BspCNI | CTCAG | 2 cut(s) | 216, 1216 |
| BspFNI | CGCG | 2 cut(s) | 31, 142 |
| BspHI | TCATGA | 1 cut(s) | 1117 |
| BspLI | GGNNCC | 6 cut(s) | 42, 373, 863, 1051, 1255, 1315 |
| BspMAI | CTGCAG | 1 cut(s) | 451 |
| BspMI | ACCTGC | 1 cut(s) | 454 |
| BspPI | GGATC | 3 cut(s) | 27, 882, 1243 |
| BspQI | GCTCTTC | 1 cut(s) | 1148 |
| BspT107I | GGYRCC | 1 cut(s) | 1313 |
| BspTNI | GGTCTC | 1 cut(s) | 1206 |
| BsrDI | GCAATG | 1 cut(s) | 459 |
| BsrI | ACTGG | 2 cut(s) | 935, 1143 |
| BssECI | CCNNGG | 7 cut(s) | 36, 37, 38, 375, 886, 899, 1257 |
| BssMI | GATC | 3 cut(s) | 32, 874, 1235 |
| BssNAI | GTATAC | 1 cut(s) | 109 |
| BssT1I | CCWWGG | 3 cut(s) | 375, 886, 899 |
| Bst1107I | GTATAC | 1 cut(s) | 109 |
| Bst2UI | CCWGG | 1 cut(s) | 1012 |
| Bst4CI | ACNGT | 2 cut(s) | 673, 1272 |
| Bst6I | CTCTTC | 2 cut(s) | 618, 1148 |
| BstC8I | GCNNGC | 2 cut(s) | 496, 525 |
| BstDEI | CTNAG | 4 cut(s) | 146, 224, 1091, 1224 |
| BstDSI | CCRYGG | 1 cut(s) | 899 |
| BstF5I | GGATG | 7 cut(s) | 95, 196, 299, 385, 627, 1401, 1439 |
| BstFNI | CGCG | 2 cut(s) | 31, 142 |
| BstHHI | GCGC | 2 cut(s) | 553, 563 |
| BstKTI | GATC | 3 cut(s) | 35, 877, 1238 |
| BstMAI | GTCTC | 3 cut(s) | 496, 615, 1206 |
| BstMBI | GATC | 3 cut(s) | 32, 874, 1235 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 11, 59, 151 |
| BstNI | CCWGG | 1 cut(s) | 1012 |
| BstNSI | RCATGY | 1 cut(s) | 340 |
| BstSCI | CCNGG | 4 cut(s) | 36, 37, 616, 1010 |
| BstSFI | CTRYAG | 2 cut(s) | 54, 447 |
| BstSLI | GKGCMC | 1 cut(s) | 996 |
| BstUI | CGCG | 2 cut(s) | 31, 142 |
| BstV1I | GCAGC | 1 cut(s) | 461 |
| BstV2I | GAAGAC | 2 cut(s) | 455, 1281 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 690 |
| BstZ17I | GTATAC | 1 cut(s) | 109 |
| BsuRI | GGCC | 4 cut(s) | 43, 1142, 1386, 1400 |
| BtgI | CCRYGG | 1 cut(s) | 899 |
| BtsCI | GGATG | 7 cut(s) | 95, 196, 299, 385, 627, 1401, 1439 |
| BtsI | GCAGTG | 3 cut(s) | 1143, 1191, 1196 |
| BtsIMutI | CAGTG | 4 cut(s) | 656, 1143, 1191, 1196 |
| BveI | ACCTGC | 1 cut(s) | 454 |
| Cac8I | GCNNGC | 2 cut(s) | 496, 525 |
| CciI | TCATGA | 1 cut(s) | 1117 |
| CfoI | GCGC | 2 cut(s) | 553, 563 |
| Cfr13I | GGNCC | 2 cut(s) | 41, 1254 |
| Cfr9I | CCCGGG | 1 cut(s) | 37 |
| CseI | GACGC | 1 cut(s) | 148 |
| Csp6I | GTAC | 5 cut(s) | 674, 789, 1295, 1314, 1465 |
| CviQI | GTAC | 5 cut(s) | 674, 789, 1295, 1314, 1465 |
| DdeI | CTNAG | 4 cut(s) | 146, 224, 1091, 1224 |
| DpnI | GATC | 3 cut(s) | 34, 876, 1237 |
| DpnII | GATC | 3 cut(s) | 32, 874, 1235 |
| DraI | TTTAAA | 1 cut(s) | 742 |
| EaeI | YGGCCR | 2 cut(s) | 1140, 1398 |
| Eam1104I | CTCTTC | 2 cut(s) | 618, 1148 |
| EarI | CTCTTC | 2 cut(s) | 618, 1148 |
| Eco130I | CCWWGG | 3 cut(s) | 375, 886, 899 |
| Eco24I | GRGCYC | 2 cut(s) | 23, 1054 |
| Eco31I | GGTCTC | 1 cut(s) | 1206 |
| Eco47I | GGWCC | 1 cut(s) | 1254 |
| Eco57I | CTGAAG | 4 cut(s) | 141, 648, 978, 1275 |
| Eco88I | CYCGRG | 1 cut(s) | 37 |
| EcoO109I | RGGNCCY | 2 cut(s) | 41, 1254 |
| EcoRII | CCWGG | 1 cut(s) | 1010 |
| EcoT14I | CCWWGG | 3 cut(s) | 375, 886, 899 |
| EcoT22I | ATGCAT | 1 cut(s) | 763 |
| EcoT38I | GRGCYC | 2 cut(s) | 23, 1054 |
| ErhI | CCWWGG | 3 cut(s) | 375, 886, 899 |
| FblI | GTMKAC | 1 cut(s) | 108 |
| Fnu4HI | GCNGC | 2 cut(s) | 143, 450 |
| FokI | GGATG | 7 cut(s) | 82, 183, 286, 392, 614, 1388, 1426 |
| FriOI | GRGCYC | 2 cut(s) | 23, 1054 |
| Fsp4HI | GCNGC | 2 cut(s) | 143, 450 |
| FspAI | RTGCGCAY | 1 cut(s) | 552 |
| FspBI | CTAG | 3 cut(s) | 80, 887, 1304 |
| FspI | TGCGCA | 2 cut(s) | 552, 562 |
| GlaI | GCGC | 2 cut(s) | 552, 562 |
| GluI | GCNGC | 2 cut(s) | 143, 450 |
| GsaI | CCCAGC | 1 cut(s) | 1105 |
| GsuI | CTGGAG | 1 cut(s) | 851 |
| HaeIII | GGCC | 4 cut(s) | 43, 1142, 1386, 1400 |
| HapII | CCGG | 3 cut(s) | 38, 618, 1205 |
| HgaI | GACGC | 1 cut(s) | 148 |
| HhaI | GCGC | 2 cut(s) | 553, 563 |
| Hin6I | GCGC | 2 cut(s) | 551, 561 |
| HinP1I | GCGC | 2 cut(s) | 551, 561 |
| HindIII | AAGCTT | 2 cut(s) | 123, 492 |
| HinfI | GANTC | 6 cut(s) | 279, 319, 659, 714, 846, 1007 |
| HpaII | CCGG | 3 cut(s) | 38, 618, 1205 |
| HphI | GGTGA | 2 cut(s) | 302, 821 |
| Hpy166II | GTNNAC | 3 cut(s) | 109, 215, 994 |
| Hpy188I | TCNGA | 7 cut(s) | 121, 766, 851, 907, 958, 1225, 1456 |
| Hpy188III | TCNNGA | 2 cut(s) | 1118, 1355 |
| Hpy8I | GTNNAC | 3 cut(s) | 109, 215, 994 |
| Hpy99I | CGWCG | 2 cut(s) | 19, 471 |
| HpyAV | CCTTC | 8 cut(s) | 62, 362, 802, 920, 1079, 1226, 1244, 1404 |
| HpyCH4III | ACNGT | 2 cut(s) | 673, 1272 |
| HpyCH4IV | ACGT | 1 cut(s) | 881 |
| HpyCH4V | TGCA | 9 cut(s) | 62, 423, 449, 498, 527, 761, 994, 1035, 1189 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 11, 59, 151 |
| HpyF3I | CTNAG | 4 cut(s) | 146, 224, 1091, 1224 |
| HpySE526I | ACGT | 1 cut(s) | 881 |
| HspAI | GCGC | 2 cut(s) | 551, 561 |
| KpnI | GGTACC | 1 cut(s) | 1317 |
| Kzo9I | GATC | 3 cut(s) | 32, 874, 1235 |
| LguI | GCTCTTC | 1 cut(s) | 1148 |
| LmnI | GCTCC | 2 cut(s) | 371, 1049 |
| Lsp1109I | GCAGC | 1 cut(s) | 461 |
| LweI | GCATC | 5 cut(s) | 49, 536, 538, 770, 1044 |
| MaeI | CTAG | 3 cut(s) | 80, 887, 1304 |
| MaeII | ACGT | 1 cut(s) | 881 |
| MaeIII | GTNAC | 3 cut(s) | 347, 667, 961 |
| MalI | GATC | 3 cut(s) | 34, 876, 1237 |
| MboI | GATC | 3 cut(s) | 32, 874, 1235 |
| MboII | GAAGA | 7 cut(s) | 455, 605, 654, 935, 1165, 1281, 1343 |
| MfeI | CAATTG | 2 cut(s) | 201, 1471 |
| MhlI | GDGCHC | 4 cut(s) | 23, 751, 996, 1054 |
| MlsI | TGGCCA | 2 cut(s) | 1142, 1400 |
| MluCI | AATT | 8 cut(s) | 159, 201, 457, 485, 538, 688, 736, 1471 |
| MluNI | TGGCCA | 2 cut(s) | 1142, 1400 |
| MmeI | TCCRAC | 3 cut(s) | 327, 675, 1429 |
| Mox20I | TGGCCA | 2 cut(s) | 1142, 1400 |
| Mph1103I | ATGCAT | 1 cut(s) | 763 |
| MscI | TGGCCA | 2 cut(s) | 1142, 1400 |
| MseI | TTAA | 6 cut(s) | 132, 179, 236, 537, 603, 741 |
| MslI | CAYNNNNRTG | 3 cut(s) | 180, 999, 1079 |
| Msp20I | TGGCCA | 2 cut(s) | 1142, 1400 |
| MspA1I | CMGCKG | 1 cut(s) | 871 |
| MspI | CCGG | 3 cut(s) | 38, 618, 1205 |
| MspR9I | CCNGG | 4 cut(s) | 38, 39, 618, 1012 |
| MunI | CAATTG | 2 cut(s) | 201, 1471 |
| MvaI | CCWGG | 1 cut(s) | 1012 |
| MvnI | CGCG | 2 cut(s) | 31, 142 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 11, 59, 151 |
| NciI | CCSGG | 3 cut(s) | 38, 39, 618 |
| NcoI | CCATGG | 1 cut(s) | 899 |
| NdeII | GATC | 3 cut(s) | 32, 874, 1235 |
| NlaIV | GGNNCC | 6 cut(s) | 42, 373, 863, 1051, 1255, 1315 |
| NmuCI | GTSAC | 1 cut(s) | 961 |
| NsbI | TGCGCA | 2 cut(s) | 552, 562 |
| NsiI | ATGCAT | 1 cut(s) | 763 |
| NspI | RCATGY | 1 cut(s) | 340 |
| PagI | TCATGA | 1 cut(s) | 1117 |
| PciSI | GCTCTTC | 1 cut(s) | 1148 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 723 |
| PfeI | GAWTC | 6 cut(s) | 279, 319, 659, 714, 846, 1007 |
| PfoI | TCCNGGA | 2 cut(s) | 616, 1010 |
| PkrI | GCNGC | 2 cut(s) | 144, 451 |
| PpuMI | RGGWCCY | 1 cut(s) | 1254 |
| PshBI | ATTAAT | 1 cut(s) | 537 |
| Psp5II | RGGWCCY | 1 cut(s) | 1254 |
| Psp6I | CCWGG | 1 cut(s) | 1010 |
| PspFI | CCCAGC | 1 cut(s) | 1101 |
| PspGI | CCWGG | 1 cut(s) | 1010 |
| PspN4I | GGNNCC | 6 cut(s) | 42, 373, 863, 1051, 1255, 1315 |
| PspPI | GGNCC | 2 cut(s) | 41, 1254 |
| PspPPI | RGGWCCY | 1 cut(s) | 1254 |
| PstI | CTGCAG | 1 cut(s) | 451 |
| PvuII | CAGCTG | 1 cut(s) | 871 |
| RsaI | GTAC | 5 cut(s) | 675, 790, 1296, 1315, 1466 |
| RsaNI | GTAC | 5 cut(s) | 674, 789, 1295, 1314, 1465 |
| RseI | CAYNNNNRTG | 3 cut(s) | 180, 999, 1079 |
| SapI | GCTCTTC | 1 cut(s) | 1148 |
| SaqAI | TTAA | 6 cut(s) | 132, 179, 236, 537, 603, 741 |
| SatI | GCNGC | 2 cut(s) | 143, 450 |
| Sau3AI | GATC | 3 cut(s) | 32, 874, 1235 |
| Sau96I | GGNCC | 2 cut(s) | 41, 1254 |
| ScrFI | CCNGG | 4 cut(s) | 38, 39, 618, 1012 |
| SduI | GDGCHC | 4 cut(s) | 23, 751, 996, 1054 |
| SfaNI | GCATC | 5 cut(s) | 49, 536, 538, 770, 1044 |
| SfcI | CTRYAG | 2 cut(s) | 54, 447 |
| SinI | GGWCC | 1 cut(s) | 1254 |
| SmaI | CCCGGG | 1 cut(s) | 39 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 180, 999, 1079 |
| Sse9I | AATT | 8 cut(s) | 159, 201, 457, 485, 538, 688, 736, 1471 |
| SsiI | CCGC | 3 cut(s) | 5, 29, 142 |
| SspMI | CTAG | 3 cut(s) | 80, 887, 1304 |
| StyD4I | CCNGG | 4 cut(s) | 36, 37, 616, 1010 |
| StyI | CCWWGG | 3 cut(s) | 375, 886, 899 |
| TaaI | ACNGT | 2 cut(s) | 673, 1272 |
| TaiI | ACGT | 1 cut(s) | 884 |
| TasI | AATT | 8 cut(s) | 159, 201, 457, 485, 538, 688, 736, 1471 |
| TauI | GCSGC | 1 cut(s) | 145 |
| TfiI | GAWTC | 6 cut(s) | 279, 319, 659, 714, 846, 1007 |
| Tru1I | TTAA | 6 cut(s) | 132, 179, 236, 537, 603, 741 |
| Tru9I | TTAA | 6 cut(s) | 132, 179, 236, 537, 603, 741 |
| TscAI | CASTG | 4 cut(s) | 656, 1150, 1191, 1196 |
| TseFI | GTSAC | 1 cut(s) | 961 |
| TseI | GCWGC | 1 cut(s) | 449 |
| Tsp45I | GTSAC | 1 cut(s) | 961 |
| TspDTI | ATGAA | 5 cut(s) | 470, 818, 957, 1335, 1418 |
| TspMI | CCCGGG | 1 cut(s) | 37 |
| TspRI | CASTG | 4 cut(s) | 656, 1150, 1191, 1196 |
| VneI | GTGCAC | 1 cut(s) | 992 |
| VpaK11BI | GGWCC | 1 cut(s) | 1254 |
| VspI | ATTAAT | 1 cut(s) | 537 |
| XceI | RCATGY | 1 cut(s) | 340 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1061 |
| XmaI | CCCGGG | 1 cut(s) | 37 |
| XmaJI | CCTAGG | 1 cut(s) | 886 |
| XmiI | GTMKAC | 1 cut(s) | 108 |
| XspI | CTAG | 3 cut(s) | 80, 887, 1304 |
| Zsp2I | ATGCAT | 1 cut(s) | 763 |