Rmu_sc0006415.1_g000005

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006415.1
OG0000067
Physical Location & Seq
Reverse (-)
33231 .. 35684
2454 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006415.1_g000005.1.cds

Sequence Viewer

Length: 1923 bp
atggaagctgttgagggcataatcctagacttaacaaagttaaaagaggtatacgtaaatgatgaagccttcgttagcatgaggagactacggctactccagctttctgaatataattatggagatggatatgtttatggaagagaatggatgcgagatgcagattatgatccctgtttacaatacgtgactcttaaaagcctcgttgagttggacctacgaggctgctcaaatctcaaaaaatttccaaatatattcggaaacatgaaggagctaagaaaactttacttagatgagactgcaattacagaaatgcccccgtcaatcaatgatctttccaggctgcagactctcagcctcactggttgcagagaactcaggagtcttccgagcagcattcacatgaaatctctagaatctcttgaactatctggctgctcgaaacttacggagtttccagagatttcagaagtaatgaagaagctatggaagcttgaattaaaagggacagcaattaaagaactaccctcatctattaataatcttacggggcttgggtatttaaatttgacaaactgcacaagccttgtctgtcttccggacaatatctgcaagttggaatgcctttttccactccgtctgactgggtgctccaacctttcaaagttgcctgagaactatgggaatatgaaatccttgtcaccgaagtatggcctctccagtgaactggagggaagtggtataaaacaacttccattctctatattgggtttgacttcattatcatgtaatggatgtaaagagatgacggcgcccttttcctcgtggccaaaatggaaccaccaaaatcattgttactctgttctgttcaaacttgatttaagtgactgcagtctcttggaattatcggatggtattgcttatttatcttcactgcaagttttagacttatccaaaaacaacaagttggaaagtttacctgcagcaatgaatcgcctgggtcatttaacacggctctatctaagaggttgcaagagactgaaatcaataccagagctttcatcgagtatacaagaaatcaatgccaaaaattgcacgtctttggagacagtttctacaccacaacctccgtacgctcggtacatttgcttggaattttttaattgcttcaagttggattattataaatgccgtatgactcttcctggaagtgatattccagattggttcaaccgtcagagtggagggtcttccgtaactgtgccgttaccacccaattggctcgcaagcaactttatcgggttcgctatatgcgccatcagtaacttgcggggtgctgctaatagaaaaactcttgattctaccacctgttgctgtaccttaaaagcaaatgacgatcaggacaatttctattttcctctgctccccccttttcgaggtggaactgacgtgccccttgatttggatcatatgttgctgggatatacaaatttccgaagtttaggagagtggcataacgaatgcaaatacaccgaggccacatttaggatagtggcagaggactatggagtcatccgagaggattgggaagattgcacttggatcacaagttgcggggttcggttattccacatgaatccacccaatctcggaggccaacgagcagagccccttcggcgcgttaaccgccgtagagttctactcccgtcactccgtctctcacggctccgactacgacaccaaccccggaagcttcaagctcttcactcagtagtggaccccactccctccaaccgaggtcctcggcgtcctcgccatagttcacggcttcaccagcgagaccaactctctacggaccttatttgcaatttggaaaatagagaaacagagataataaggagtaagagaaggaggaaacactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR

Protein Analysis

640

Amino Acids

72.89

Weight (kDa)

8.73

Isoelectric Point (pI)

49.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1185
AasI GACNNNNNNGTC 1 cut(s) 1568
Acc36I ACCTGC 1 cut(s) 988
AccB1I GGYRCC 1 cut(s) 811
AccI GTMKAC 2 cut(s) 51, 1069
AccII CGCG 1 cut(s) 1680
AccIII TCCGGA 1 cut(s) 598
AciI CCGC 3 cut(s) 1330, 1614, 1687
AclWI GGATC 3 cut(s) 164, 1473, 1610
AcoI YGGCCR 1 cut(s) 827
AcsI RAATTY 4 cut(s) 242, 565, 1154, 1489
AcyI GRCGYC 2 cut(s) 812, 1807
AfaI GTAC 3 cut(s) 1133, 1142, 1378
AfiI CCNNNNNNNGG 5 cut(s) 710, 1436, 1462, 1545, 1649
AgsI TTSAA 7 cut(s) 425, 497, 663, 871, 1171, 1231, 1757
AjiI CACGTC 2 cut(s) 1098, 1450
AjnI CCWGG 3 cut(s) 338, 996, 1204
AluBI AGCT 8 cut(s) 8, 103, 274, 484, 493, 1057, 1753, 1760
AluI AGCT 8 cut(s) 8, 103, 274, 484, 493, 1057, 1753, 1760
Alw21I GWGCWC 1 cut(s) 653
Alw26I GTCTC 7 cut(s) 79, 290, 899, 1030, 1100, 1721, 1833
AlwI GGATC 3 cut(s) 164, 1473, 1610
Aor13HI TCCGGA 1 cut(s) 598
AoxI GGCC 4 cut(s) 712, 827, 1536, 1654
ApeKI GCWGC 6 cut(s) 225, 343, 393, 435, 983, 1337
ApoI RAATTY 4 cut(s) 242, 565, 1154, 1489
AseI ATTAAT 1 cut(s) 537
AspLEI GCGC 3 cut(s) 814, 1316, 1680
AspS9I GGNCC 4 cut(s) 214, 1777, 1799, 1855
AsuC2I CCSGG 1 cut(s) 1747
AsuHPI GGTGA 2 cut(s) 693, 1823
AvaII GGWCC 4 cut(s) 214, 1777, 1799, 1855
BaeGI GKGCMC 1 cut(s) 1455
BalI TGGCCA 1 cut(s) 829
BanI GGYRCC 1 cut(s) 811
BanII GRGCYC 1 cut(s) 1671
BauI CACGAG 1 cut(s) 823
BbsI GAAGAC 3 cut(s) 377, 587, 1242
Bbv12I GWGCWC 1 cut(s) 653
BbvI GCAGC 6 cut(s) 212, 330, 405, 422, 995, 1324
BccI CCATC 3 cut(s) 119, 905, 1325
BceAI ACGGC 8 cut(s) 107, 825, 1028, 1176, 1249, 1674, 1739, 1841
BcgI CGANNNNNNTGC 2 cut(s) 1279, 1313
BciT130I CCWGG 3 cut(s) 340, 998, 1206
BcnI CCSGG 1 cut(s) 1747
BcoDI GTCTC 7 cut(s) 79, 290, 899, 1030, 1100, 1721, 1833
BfaI CTAG 3 cut(s) 26, 413, 1921
BfmI CTRYAG 3 cut(s) 344, 889, 981
BfoI RGCGCY 1 cut(s) 815
BfuAI ACCTGC 1 cut(s) 988
BglI GCCNNNNNGGC 1 cut(s) 1675
BisI GCNGC 6 cut(s) 226, 344, 394, 436, 984, 1338
BlsI GCNGC 6 cut(s) 227, 345, 395, 437, 985, 1339
Bme1390I CCNGG 4 cut(s) 340, 998, 1206, 1747
Bme18I GGWCC 4 cut(s) 214, 1777, 1799, 1855
BmgBI CACGTC 2 cut(s) 1098, 1450
BmgT120I GGNCC 4 cut(s) 214, 1777, 1799, 1855
BmiI GGNNCC 4 cut(s) 813, 839, 1727, 1779
BmrFI CCNGG 4 cut(s) 340, 998, 1206, 1747
BmrI ACTGGG 1 cut(s) 654
BmsI GCATC 2 cut(s) 141, 148
BmuI ACTGGG 1 cut(s) 654
BoxI GACNNNNGTC 1 cut(s) 891
BpiI GAAGAC 3 cut(s) 377, 587, 1242
BplI GAGNNNNNCTC 4 cut(s) 1686, 1718, 1830, 1862
BpmI CTGGAG 3 cut(s) 83, 703, 749
BpuMI CCSGG 1 cut(s) 1747
BsaAI YACGTR 2 cut(s) 55, 187
BsaBI GATNNNNATC 2 cut(s) 168, 1464
BsaHI GRCGYC 2 cut(s) 812, 1807
BsaI GGTCTC 1 cut(s) 1833
BsaJI CCNNGG 5 cut(s) 997, 1533, 1745, 1795, 1802
BsaWI WCCGGW 1 cut(s) 598
BsaXI ACNNNNNCTCC 2 cut(s) 81, 111
Bsc4I CCNNNNNNNGG 5 cut(s) 710, 1436, 1462, 1545, 1649
Bse1I ACTGG 4 cut(s) 367, 649, 720, 732
Bse3DI GCAATG 1 cut(s) 993
Bse8I GATNNNNATC 2 cut(s) 168, 1464
BseAI TCCGGA 1 cut(s) 598
BseBI CCWGG 3 cut(s) 340, 998, 1206
BseDI CCNNGG 5 cut(s) 997, 1533, 1745, 1795, 1802
BseGI GGATG 4 cut(s) 156, 800, 916, 1572
BseJI GATNNNNATC 2 cut(s) 168, 1464
BseLI CCNNNNNNNGG 5 cut(s) 710, 1436, 1462, 1545, 1649
BseMI GCAATG 1 cut(s) 993
BseMII CTCAG 4 cut(s) 367, 391, 663, 1782
BseNI ACTGG 4 cut(s) 367, 649, 720, 732
BseRI GAGGAG 1 cut(s) 97
BseSI GKGCMC 1 cut(s) 1455
BseXI GCAGC 6 cut(s) 212, 330, 405, 422, 995, 1324
BseYI CCCAGC 1 cut(s) 1477
BsgI GTGCAG 1 cut(s) 562
Bsh1236I CGCG 1 cut(s) 1680
BshFI GGCC 4 cut(s) 714, 829, 1538, 1656
BshNI GGYRCC 1 cut(s) 811
BsiHKAI GWGCWC 1 cut(s) 653
BsiSI CCGG 2 cut(s) 599, 1747
BsiWI CGTACG 1 cut(s) 1131
BslFI GGGAC 1 cut(s) 520
BslI CCNNNNNNNGG 5 cut(s) 710, 1436, 1462, 1545, 1649
BsmAI GTCTC 7 cut(s) 79, 290, 899, 1030, 1100, 1721, 1833
BsmBI CGTCTC 1 cut(s) 1721
BsmFI GGGAC 1 cut(s) 520
BsmI GAATGC 3 cut(s) 396, 626, 1526
BsnI GGCC 4 cut(s) 714, 829, 1538, 1656
Bso31I GGTCTC 1 cut(s) 1833
Bsp1286I GDGCHC 3 cut(s) 653, 1455, 1671
Bsp13I TCCGGA 1 cut(s) 598
Bsp143I GATC 5 cut(s) 169, 331, 1396, 1465, 1602
BspACI CCGC 3 cut(s) 1330, 1614, 1687
BspANI GGCC 4 cut(s) 714, 829, 1538, 1656
BspCNI CTCAG 4 cut(s) 366, 390, 664, 1781
BspEI TCCGGA 1 cut(s) 598
BspFNI CGCG 1 cut(s) 1680
BspLI GGNNCC 4 cut(s) 813, 839, 1727, 1779
BspMAI CTGCAG 3 cut(s) 348, 893, 985
BspMI ACCTGC 1 cut(s) 988
BspPI GGATC 3 cut(s) 164, 1473, 1610
BspQI GCTCTTC 1 cut(s) 1767
BspT107I GGYRCC 1 cut(s) 811
BspTNI GGTCTC 1 cut(s) 1833
BsrDI GCAATG 1 cut(s) 993
BsrI ACTGG 4 cut(s) 367, 649, 720, 732
BssECI CCNNGG 5 cut(s) 997, 1533, 1745, 1795, 1802
BssMI GATC 5 cut(s) 169, 331, 1396, 1465, 1602
BssNAI GTATAC 2 cut(s) 52, 1070
BssNI GRCGYC 2 cut(s) 812, 1807
BssSI CACGAG 1 cut(s) 823
Bst1107I GTATAC 2 cut(s) 52, 1070
Bst2BI CACGAG 1 cut(s) 823
Bst2UI CCWGG 3 cut(s) 340, 998, 1206
Bst4CI ACNGT 3 cut(s) 1111, 1235, 1261
Bst6I CTCTTC 3 cut(s) 136, 1206, 1767
BstACI GRCGYC 2 cut(s) 812, 1807
BstBAI YACGTR 2 cut(s) 55, 187
BstC8I GCNNGC 2 cut(s) 1284, 1288
BstDEI CTNAG 7 cut(s) 275, 289, 353, 377, 672, 1022, 1768
BstENI CCTNNNNNAGG 1 cut(s) 1434
BstF5I GGATG 4 cut(s) 156, 800, 916, 1572
BstFNI CGCG 1 cut(s) 1680
BstH2I RGCGCY 1 cut(s) 815
BstHHI GCGC 3 cut(s) 814, 1316, 1680
BstKTI GATC 5 cut(s) 172, 334, 1399, 1468, 1605
BstMAI GTCTC 7 cut(s) 79, 290, 899, 1030, 1100, 1721, 1833
BstMBI GATC 5 cut(s) 169, 331, 1396, 1465, 1602
BstMWI GCNNNNNNNGC 6 cut(s) 100, 490, 1313, 1675, 1686, 1834
BstNI CCWGG 3 cut(s) 340, 998, 1206
BstPAI GACNNNNGTC 1 cut(s) 891
BstSCI CCNGG 4 cut(s) 338, 996, 1204, 1745
BstSFI CTRYAG 3 cut(s) 344, 889, 981
BstSLI GKGCMC 1 cut(s) 1455
BstSNI TACGTA 1 cut(s) 55
BstUI CGCG 1 cut(s) 1680
BstV1I GCAGC 6 cut(s) 212, 330, 405, 422, 995, 1324
BstV2I GAAGAC 3 cut(s) 377, 587, 1242
BstXI CCANNNNNNTGG 2 cut(s) 727, 1278
BstZ17I GTATAC 2 cut(s) 52, 1070
BsuRI GGCC 4 cut(s) 714, 829, 1538, 1656
BtrI CACGTC 2 cut(s) 1098, 1450
BtsCI GGATG 4 cut(s) 156, 800, 916, 1572
BtsI GCAGTG 1 cut(s) 932
BtsIMutI CAGTG 3 cut(s) 360, 727, 932
BveI ACCTGC 1 cut(s) 988
Cac8I GCNNGC 2 cut(s) 1284, 1288
CfoI GCGC 3 cut(s) 814, 1316, 1680
Cfr13I GGNCC 4 cut(s) 214, 1777, 1799, 1855
CseI GACGC 1 cut(s) 1796
Csp6I GTAC 3 cut(s) 1132, 1141, 1377
CviAII CATG 5 cut(s) 79, 265, 403, 786, 1633
CviQI GTAC 3 cut(s) 1132, 1141, 1377
DdeI CTNAG 7 cut(s) 275, 289, 353, 377, 672, 1022, 1768
DinI GGCGCC 1 cut(s) 813
DpnI GATC 5 cut(s) 171, 333, 1398, 1467, 1604
DpnII GATC 5 cut(s) 169, 331, 1396, 1465, 1602
DraI TTTAAA 1 cut(s) 564
DrdI GACNNNNNNGTC 1 cut(s) 1568
DseDI GACNNNNNNGTC 1 cut(s) 1568
EaeI YGGCCR 1 cut(s) 827
Eam1104I CTCTTC 3 cut(s) 136, 1206, 1767
EarI CTCTTC 3 cut(s) 136, 1206, 1767
Eco105I TACGTA 1 cut(s) 55
Eco24I GRGCYC 1 cut(s) 1671
Eco31I GGTCTC 1 cut(s) 1833
Eco47I GGWCC 4 cut(s) 214, 1777, 1799, 1855
EcoNI CCTNNNNNAGG 1 cut(s) 1434
EcoO109I RGGNCCY 1 cut(s) 1799
EcoRII CCWGG 3 cut(s) 338, 996, 1204
EcoT38I GRGCYC 1 cut(s) 1671
EgeI GGCGCC 1 cut(s) 813
EheI GGCGCC 1 cut(s) 813
Esp3I CGTCTC 1 cut(s) 1721
FaeI CATG 5 cut(s) 82, 268, 406, 789, 1636
FaqI GGGAC 1 cut(s) 520
FatI CATG 5 cut(s) 78, 264, 402, 785, 1632
FauI CCCGC 2 cut(s) 1323, 1607
FauNDI CATATG 1 cut(s) 1470
FblI GTMKAC 2 cut(s) 51, 1069
Fnu4HI GCNGC 6 cut(s) 226, 344, 394, 436, 984, 1338
FokI GGATG 4 cut(s) 163, 807, 923, 1559
FriOI GRGCYC 1 cut(s) 1671
Fsp4HI GCNGC 6 cut(s) 226, 344, 394, 436, 984, 1338
FspBI CTAG 3 cut(s) 26, 413, 1921
GlaI GCGC 3 cut(s) 813, 1315, 1679
GluI GCNGC 6 cut(s) 226, 344, 394, 436, 984, 1338
GsaI CCCAGC 1 cut(s) 1481
GsuI CTGGAG 3 cut(s) 83, 703, 749
HaeII RGCGCY 1 cut(s) 815
HaeIII GGCC 4 cut(s) 714, 829, 1538, 1656
HapII CCGG 2 cut(s) 599, 1747
HgaI GACGC 1 cut(s) 1796
HhaI GCGC 3 cut(s) 814, 1316, 1680
Hin1I GRCGYC 2 cut(s) 812, 1807
Hin1II CATG 5 cut(s) 82, 268, 406, 789, 1636
Hin6I GCGC 3 cut(s) 812, 1314, 1678
HinP1I GCGC 3 cut(s) 812, 1314, 1678
HincII GTYRAC 1 cut(s) 1684
HindII GTYRAC 1 cut(s) 1684
HindIII AAGCTT 2 cut(s) 491, 1751
HinfI GANTC 9 cut(s) 190, 349, 382, 416, 991, 1198, 1358, 1569, 1636
HpaI GTTAAC 1 cut(s) 1684
HpaII CCGG 2 cut(s) 599, 1747
HphI GGTGA 2 cut(s) 693, 1823
Hpy166II GTNNAC 8 cut(s) 52, 179, 725, 977, 1070, 1684, 1777, 1823
Hpy188III TCNNGA 8 cut(s) 379, 413, 422, 458, 599, 1220, 1355, 1400
Hpy8I GTNNAC 8 cut(s) 52, 179, 725, 977, 1070, 1684, 1777, 1823
HpyAV CCTTC 4 cut(s) 79, 262, 1682, 1902
HpyCH4III ACNGT 3 cut(s) 1111, 1235, 1261
HpyCH4IV ACGT 4 cut(s) 54, 186, 1097, 1449
HpyF10VI GCNNNNNNNGC 6 cut(s) 100, 490, 1313, 1675, 1686, 1834
HpyF3I CTNAG 7 cut(s) 275, 289, 353, 377, 672, 1022, 1768
HpySE526I ACGT 4 cut(s) 54, 186, 1097, 1449
Hsp92I GRCGYC 2 cut(s) 812, 1807
Hsp92II CATG 5 cut(s) 82, 268, 406, 789, 1636
HspAI GCGC 3 cut(s) 812, 1314, 1678
KasI GGCGCC 1 cut(s) 811
Kpn2I TCCGGA 1 cut(s) 598
KspAI GTTAAC 1 cut(s) 1684
Kzo9I GATC 5 cut(s) 169, 331, 1396, 1465, 1602
LguI GCTCTTC 1 cut(s) 1767
LmnI GCTCC 4 cut(s) 271, 656, 1428, 1731
Lsp1109I GCAGC 6 cut(s) 212, 330, 405, 422, 995, 1324
LweI GCATC 2 cut(s) 141, 148
MaeI CTAG 3 cut(s) 26, 413, 1921
MaeII ACGT 4 cut(s) 54, 186, 1097, 1449
MaeIII GTNAC 8 cut(s) 187, 699, 854, 884, 1255, 1266, 1322, 1707
MalI GATC 5 cut(s) 171, 333, 1398, 1467, 1604
MboI GATC 5 cut(s) 169, 331, 1396, 1465, 1602
MboII GAAGA 9 cut(s) 153, 377, 490, 587, 921, 1193, 1242, 1601, 1754
MfeI CAATTG 1 cut(s) 1276
MhlI GDGCHC 3 cut(s) 653, 1455, 1671
MlsI TGGCCA 1 cut(s) 829
MluNI TGGCCA 1 cut(s) 829
Mly113I GGCGCC 1 cut(s) 812
MlyI GAGTC 5 cut(s) 184, 343, 391, 1192, 1578
MmeI TCCRAC 7 cut(s) 192, 597, 678, 948, 1155, 1753, 1815
Mox20I TGGCCA 1 cut(s) 829
MroI TCCGGA 1 cut(s) 598
MscI TGGCCA 1 cut(s) 829
MslI CAYNNNNRTG 2 cut(s) 401, 784
Msp20I TGGCCA 1 cut(s) 829
MspI CCGG 2 cut(s) 599, 1747
MspR9I CCNGG 4 cut(s) 340, 998, 1206, 1747
MunI CAATTG 1 cut(s) 1276
Mva1269I GAATGC 3 cut(s) 396, 626, 1526
MvaI CCWGG 3 cut(s) 340, 998, 1206
MvnI CGCG 1 cut(s) 1680
MwoI GCNNNNNNNGC 6 cut(s) 100, 490, 1313, 1675, 1686, 1834
NarI GGCGCC 1 cut(s) 812
NciI CCSGG 1 cut(s) 1747
NdeI CATATG 1 cut(s) 1470
NdeII GATC 5 cut(s) 169, 331, 1396, 1465, 1602
NlaIII CATG 5 cut(s) 82, 268, 406, 789, 1636
NlaIV GGNNCC 4 cut(s) 813, 839, 1727, 1779
NmeAIII GCCGAG 1 cut(s) 1783
NmuCI GTSAC 4 cut(s) 187, 699, 884, 1707
PciSI GCTCTTC 1 cut(s) 1767
PctI GAATGC 3 cut(s) 396, 626, 1526
PfeI GAWTC 4 cut(s) 416, 991, 1358, 1636
Pfl23II CGTACG 1 cut(s) 1131
PfoI TCCNGGA 1 cut(s) 1204
PkrI GCNGC 6 cut(s) 227, 345, 395, 437, 985, 1339
PleI GAGTC 5 cut(s) 184, 343, 390, 1192, 1577
PluTI GGCGCC 1 cut(s) 815
PpsI GAGTC 5 cut(s) 184, 343, 390, 1192, 1577
Ppu21I YACGTR 2 cut(s) 55, 187
PpuMI RGGWCCY 1 cut(s) 1799
PshAI GACNNNNGTC 1 cut(s) 891
PshBI ATTAAT 1 cut(s) 537
PsiI TTATAA 1 cut(s) 1185
Psp5II RGGWCCY 1 cut(s) 1799
Psp6I CCWGG 3 cut(s) 338, 996, 1204
PspFI CCCAGC 1 cut(s) 1477
PspGI CCWGG 3 cut(s) 338, 996, 1204
PspLI CGTACG 1 cut(s) 1131
PspN4I GGNNCC 4 cut(s) 813, 839, 1727, 1779
PspPI GGNCC 4 cut(s) 214, 1777, 1799, 1855
PspPPI RGGWCCY 1 cut(s) 1799
PstI CTGCAG 3 cut(s) 348, 893, 985
RsaI GTAC 3 cut(s) 1133, 1142, 1378
RsaNI GTAC 3 cut(s) 1132, 1141, 1377
RseI CAYNNNNRTG 2 cut(s) 401, 784
SapI GCTCTTC 1 cut(s) 1767
SatI GCNGC 6 cut(s) 226, 344, 394, 436, 984, 1338
Sau3AI GATC 5 cut(s) 169, 331, 1396, 1465, 1602
Sau96I GGNCC 4 cut(s) 214, 1777, 1799, 1855
SchI GAGTC 5 cut(s) 184, 343, 391, 1192, 1578
ScrFI CCNGG 4 cut(s) 340, 998, 1206, 1747
SduI GDGCHC 3 cut(s) 653, 1455, 1671
SfaNI GCATC 2 cut(s) 141, 148
SfcI CTRYAG 3 cut(s) 344, 889, 981
SfoI GGCGCC 1 cut(s) 813
SinI GGWCC 4 cut(s) 214, 1777, 1799, 1855
SmiI ATTTAAAT 1 cut(s) 564
SmiMI CAYNNNNRTG 2 cut(s) 401, 784
SnaBI TACGTA 1 cut(s) 55
SsiI CCGC 3 cut(s) 1330, 1614, 1687
SspDI GGCGCC 1 cut(s) 811
SspMI CTAG 3 cut(s) 26, 413, 1921
StyD4I CCNGG 4 cut(s) 338, 996, 1204, 1745
SwaI ATTTAAAT 1 cut(s) 564
TaaI ACNGT 3 cut(s) 1111, 1235, 1261
TaiI ACGT 4 cut(s) 57, 189, 1100, 1452
TaqI TCGA 3 cut(s) 440, 1064, 1435
TfiI GAWTC 4 cut(s) 416, 991, 1358, 1636
TscAI CASTG 3 cut(s) 367, 727, 939
TseFI GTSAC 4 cut(s) 187, 699, 884, 1707
TseI GCWGC 6 cut(s) 225, 343, 393, 435, 983, 1337
Tsp45I GTSAC 4 cut(s) 187, 699, 884, 1707
TspDTI ATGAA 9 cut(s) 78, 281, 419, 491, 704, 768, 1004, 1050, 1649
TspGWI ACGGA 6 cut(s) 464, 626, 1119, 1243, 1703, 1868
TspRI CASTG 3 cut(s) 367, 727, 939
VpaK11BI GGWCC 4 cut(s) 214, 1777, 1799, 1855
VspI ATTAAT 1 cut(s) 537
XagI CCTNNNNNAGG 1 cut(s) 1434
XapI RAATTY 4 cut(s) 242, 565, 1154, 1489
XbaI TCTAGA 1 cut(s) 412
XmiI GTMKAC 2 cut(s) 51, 1069
XspI CTAG 3 cut(s) 26, 413, 1921
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.