Rmu_sc0000827.1_g000036

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000827.1
OG0000067
Physical Location & Seq
Forward (+)
155629 .. 158807
3179 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000827.1_g000036.1.cds

Sequence Viewer

Length: 1377 bp
atgggtttcgagaagaagttgggttcgatcgattcttttttagaagaagatggccgcgggttctactttgagaagaagaagatgagttttgctctttttctcaaagactacctagctaaaacaaacaaatattcacagaattatgacgctatctcaaggcgtgccgtagagtatgcgcatggtcttcctttagcactcaaagtcttgggagctttgcttgataacagaactgtacaggagtgggaatatgagttggagaagataaagaaaatcccaatcacgtttcttgataataagattggacgtgtgctttgggcaagctatgatggattggatgaatatcagaagaaaatatttctagatattgcatgtttctttaagagaatggacaaagattttgtaacaaagtttcatgaaagttgtggctttttcccccagaatggactaagagttttggaagaaagatctcttgtaagtgtctcacggggtggtgaactagagatgcatgatttgatacaggaagtgggtagggacatcgtccaccgacaatctactgaagatccgggaatgcgtagtagattatgggattatgaagatgttcaccaagtgttagctcaaaatacggctacgaaagttgaaggcataattctagacttgtcaaagttcaaagaggtatacgtaaatgatgaagtttttgttagcatgaggagactaaggctactccagctttatgaatattattatgaagatgaatatgaatatgattatggaagtgcaaggaatgaatatgattatgaaagtgaatcgagacctgcagattatgaaccttgtgtacagaaagtgagtgagaacttaaagtttctttctcaagagttgagatttcttgtgtggcatggatgcccactaaagtctttcccaattaattttctaccaaagaatcttatttatgttgacatgtgctatagtcgtattgaacaactttgggaaggaaccaggcctttgcaagacttggtacacatcgatttaagatactcaaagtatctaatcaaaaccctcgatttcactggggcaacaaatcttaagaaattgaagcttaaaggatgtacaagtttattggaggttcacccatccatttcagctcttaaaagcctcgttgagttggacctacgaggctgctcaaatctcaaaaagtttccaaatatatccggaaatatgaagaagctagaagcactttacttagataagactgcaattacagaaatgcccttgtcaattaatgatctttctgggctgctgactttgagtctcgctggttgcagagaactcaggagtcttccgagcagcattcacatgaatcaatttggcatggctttataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR

Protein Analysis

458

Amino Acids

53.26

Weight (kDa)

6.08

Isoelectric Point (pI)

42.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1375
Acc16I TGCGCA 1 cut(s) 177
Acc36I ACCTGC 1 cut(s) 820
AccI GTMKAC 1 cut(s) 675
AccII CGCG 1 cut(s) 57
AccIII TCCGGA 1 cut(s) 1205
AciI CCGC 2 cut(s) 55, 57
AclWI GGATC 1 cut(s) 554
AcoI YGGCCR 1 cut(s) 52
AcuI CTGAAG 1 cut(s) 576
AdeI CACNNNGTG 2 cut(s) 488, 607
AfaI GTAC 4 cut(s) 234, 834, 1014, 1105
AfiI CCNNNNNNNGG 1 cut(s) 440
AflII CTTAAG 1 cut(s) 1079
AflIII ACRYGT 2 cut(s) 304, 954
AgsI TTSAA 4 cut(s) 638, 667, 974, 1090
AhdI GACNNNNNGTC 1 cut(s) 1302
AjiI CACGTC 1 cut(s) 305
AjnI CCWGG 1 cut(s) 992
AluBI AGCT 8 cut(s) 116, 212, 321, 614, 727, 1093, 1139, 1222
AluI AGCT 8 cut(s) 116, 212, 321, 614, 727, 1093, 1139, 1222
Alw26I GTCTC 4 cut(s) 484, 703, 802, 1310
AlwI GGATC 1 cut(s) 554
Aor13HI TCCGGA 1 cut(s) 1205
AoxI GGCC 2 cut(s) 52, 995
ApeKI GCWGC 3 cut(s) 1173, 1291, 1341
ArsI GACNNNNNNTTYG 4 cut(s) 294, 326, 380, 412
AseI ATTAAT 2 cut(s) 921, 1275
Asp700I GAANNNNTTC 1 cut(s) 597
AspLEI GCGC 1 cut(s) 178
AspS9I GGNCC 1 cut(s) 1162
AsuC2I CCSGG 1 cut(s) 564
AsuHPI GGTGA 3 cut(s) 503, 593, 1115
AvaII GGWCC 1 cut(s) 1162
BbsI GAAGAC 2 cut(s) 176, 1325
BbvI GCAGC 3 cut(s) 1160, 1278, 1353
BccI CCATC 3 cut(s) 44, 320, 1135
BceAI ACGGC 2 cut(s) 149, 639
BciT130I CCWGG 1 cut(s) 994
BcnI CCSGG 1 cut(s) 564
BcoDI GTCTC 4 cut(s) 484, 703, 802, 1310
BfaI CTAG 5 cut(s) 113, 359, 497, 650, 1223
BfmI CTRYAG 2 cut(s) 813, 961
BfrI CTTAAG 1 cut(s) 1079
BfuAI ACCTGC 1 cut(s) 820
BglII AGATCT 1 cut(s) 464
BisI GCNGC 4 cut(s) 55, 1174, 1292, 1342
BlsI GCNGC 4 cut(s) 56, 1175, 1293, 1343
Bme1390I CCNGG 2 cut(s) 564, 994
Bme18I GGWCC 1 cut(s) 1162
BmeRI GACNNNNNGTC 1 cut(s) 1302
BmgBI CACGTC 1 cut(s) 305
BmgT120I GGNCC 1 cut(s) 1162
BmiI GGNNCC 1 cut(s) 991
BmrFI CCNGG 2 cut(s) 564, 994
BmrI ACTGGG 1 cut(s) 1074
BmsI GCATC 2 cut(s) 492, 887
BmuI ACTGGG 1 cut(s) 1074
BpiI GAAGAC 2 cut(s) 176, 1325
BplI GAGNNNNNCTC 2 cut(s) 76, 108
BpmI CTGGAG 1 cut(s) 707
BpuEI CTTGAG 2 cut(s) 139, 852
BpuMI CCSGG 1 cut(s) 564
Bsa29I ATCGAT 2 cut(s) 30, 1020
BsaAI YACGTR 1 cut(s) 679
BsaBI GATNNNNATC 1 cut(s) 339
BsaI GGTCTC 1 cut(s) 802
BsaJI CCNNGG 1 cut(s) 55
BsaWI WCCGGW 1 cut(s) 1205
Bsc4I CCNNNNNNNGG 1 cut(s) 440
Bse1I ACTGG 1 cut(s) 1069
Bse8I GATNNNNATC 1 cut(s) 339
BseAI TCCGGA 1 cut(s) 1205
BseBI CCWGG 1 cut(s) 994
BseCI ATCGAT 2 cut(s) 30, 1020
BseDI CCNNGG 1 cut(s) 55
BseGI GGATG 4 cut(s) 340, 902, 1106, 1127
BseJI GATNNNNATC 1 cut(s) 339
BseLI CCNNNNNNNGG 1 cut(s) 440
BseMII CTCAG 1 cut(s) 1339
BseNI ACTGG 1 cut(s) 1069
BseRI GAGGAG 1 cut(s) 721
BseXI GCAGC 3 cut(s) 1160, 1278, 1353
Bsh1236I CGCG 1 cut(s) 57
Bsh1285I CGRYCG 1 cut(s) 30
BshFI GGCC 2 cut(s) 54, 997
BshVI ATCGAT 2 cut(s) 30, 1020
BsiEI CGRYCG 1 cut(s) 30
BsiSI CCGG 2 cut(s) 563, 1206
BslFI GGGAC 1 cut(s) 545
BslI CCNNNNNNNGG 1 cut(s) 440
BsmAI GTCTC 4 cut(s) 484, 703, 802, 1310
BsmFI GGGAC 1 cut(s) 545
BsmI GAATGC 2 cut(s) 573, 1344
BsnI GGCC 2 cut(s) 54, 997
Bso31I GGTCTC 1 cut(s) 802
Bsp13I TCCGGA 1 cut(s) 1205
Bsp1407I TGTACA 3 cut(s) 232, 832, 1103
Bsp143I GATC 4 cut(s) 27, 464, 559, 1279
BspACI CCGC 2 cut(s) 55, 57
BspANI GGCC 2 cut(s) 54, 997
BspCNI CTCAG 1 cut(s) 1338
BspDI ATCGAT 2 cut(s) 30, 1020
BspEI TCCGGA 1 cut(s) 1205
BspFNI CGCG 1 cut(s) 57
BspHI TCATGA 1 cut(s) 412
BspLI GGNNCC 1 cut(s) 991
BspMAI CTGCAG 1 cut(s) 817
BspMI ACCTGC 1 cut(s) 820
BspPI GGATC 1 cut(s) 554
BspTI CTTAAG 1 cut(s) 1079
BspTNI GGTCTC 1 cut(s) 802
BsrGI TGTACA 3 cut(s) 232, 832, 1103
BsrI ACTGG 1 cut(s) 1069
BssECI CCNNGG 1 cut(s) 55
BssMI GATC 4 cut(s) 27, 464, 559, 1279
BssNAI GTATAC 1 cut(s) 676
Bst1107I GTATAC 1 cut(s) 676
Bst2UI CCWGG 1 cut(s) 994
Bst4CI ACNGT 1 cut(s) 232
BstAFI CTTAAG 1 cut(s) 1079
BstAUI TGTACA 3 cut(s) 232, 832, 1103
BstBAI YACGTR 1 cut(s) 679
BstC8I GCNNGC 2 cut(s) 162, 319
BstDEI CTNAG 4 cut(s) 446, 713, 1237, 1325
BstDSI CCRYGG 1 cut(s) 55
BstF5I GGATG 4 cut(s) 340, 902, 1106, 1127
BstFNI CGCG 1 cut(s) 57
BstHHI GCGC 1 cut(s) 178
BstKTI GATC 4 cut(s) 30, 467, 562, 1282
BstMAI GTCTC 4 cut(s) 484, 703, 802, 1310
BstMBI GATC 4 cut(s) 27, 464, 559, 1279
BstMCI CGRYCG 1 cut(s) 30
BstMWI GCNNNNNNNGC 1 cut(s) 724
BstNI CCWGG 1 cut(s) 994
BstNSI RCATGY 2 cut(s) 372, 958
BstSCI CCNGG 2 cut(s) 562, 992
BstSFI CTRYAG 2 cut(s) 813, 961
BstSNI TACGTA 1 cut(s) 679
BstUI CGCG 1 cut(s) 57
BstV1I GCAGC 3 cut(s) 1160, 1278, 1353
BstV2I GAAGAC 2 cut(s) 176, 1325
BstX2I RGATCY 2 cut(s) 464, 559
BstYI RGATCY 2 cut(s) 464, 559
BstZ17I GTATAC 1 cut(s) 676
Bsu15I ATCGAT 2 cut(s) 30, 1020
BsuRI GGCC 2 cut(s) 54, 997
BsuTUI ATCGAT 2 cut(s) 30, 1020
BtgI CCRYGG 1 cut(s) 55
BtrI CACGTC 1 cut(s) 305
BtsCI GGATG 4 cut(s) 340, 902, 1106, 1127
BtsIMutI CAGTG 1 cut(s) 1062
BveI ACCTGC 1 cut(s) 820
Cac8I GCNNGC 2 cut(s) 162, 319
CciI TCATGA 1 cut(s) 412
CfoI GCGC 1 cut(s) 178
Cfr13I GGNCC 1 cut(s) 1162
Cfr42I CCGCGG 1 cut(s) 58
ClaI ATCGAT 2 cut(s) 30, 1020
CseI GACGC 1 cut(s) 155
Csp6I GTAC 4 cut(s) 233, 833, 1013, 1104
CviAII CATG 9 cut(s) 179, 369, 413, 506, 703, 893, 955, 1351, 1366
CviQI GTAC 4 cut(s) 233, 833, 1013, 1104
DdeI CTNAG 4 cut(s) 446, 713, 1237, 1325
DpnI GATC 4 cut(s) 29, 466, 561, 1281
DpnII GATC 4 cut(s) 27, 464, 559, 1279
DraIII CACNNNGTG 2 cut(s) 488, 607
DriI GACNNNNNGTC 1 cut(s) 1302
EaeI YGGCCR 1 cut(s) 52
Eam1105I GACNNNNNGTC 1 cut(s) 1302
Eco105I TACGTA 1 cut(s) 679
Eco147I AGGCCT 1 cut(s) 997
Eco31I GGTCTC 1 cut(s) 802
Eco47I GGWCC 1 cut(s) 1162
Eco57I CTGAAG 1 cut(s) 576
EcoRII CCWGG 1 cut(s) 992
EcoT22I ATGCAT 1 cut(s) 507
FaeI CATG 9 cut(s) 182, 372, 416, 509, 706, 896, 958, 1354, 1369
FaqI GGGAC 1 cut(s) 545
FatI CATG 9 cut(s) 178, 368, 412, 505, 702, 892, 954, 1350, 1365
FauI CCCGC 1 cut(s) 50
FblI GTMKAC 1 cut(s) 675
Fnu4HI GCNGC 4 cut(s) 55, 1174, 1292, 1342
FokI GGATG 4 cut(s) 347, 909, 1113, 1114
Fsp4HI GCNGC 4 cut(s) 55, 1174, 1292, 1342
FspAI RTGCGCAY 1 cut(s) 177
FspBI CTAG 5 cut(s) 113, 359, 497, 650, 1223
FspI TGCGCA 1 cut(s) 177
GlaI GCGC 1 cut(s) 177
GluI GCNGC 4 cut(s) 55, 1174, 1292, 1342
GsuI CTGGAG 1 cut(s) 707
HaeIII GGCC 2 cut(s) 54, 997
HapII CCGG 2 cut(s) 563, 1206
HgaI GACGC 1 cut(s) 155
HhaI GCGC 1 cut(s) 178
Hin1II CATG 9 cut(s) 182, 372, 416, 509, 706, 896, 958, 1354, 1369
Hin6I GCGC 1 cut(s) 176
HinP1I GCGC 1 cut(s) 176
HincII GTYRAC 1 cut(s) 952
HindII GTYRAC 1 cut(s) 952
HindIII AAGCTT 1 cut(s) 1091
HinfI GANTC 6 cut(s) 32, 803, 937, 1303, 1330, 1354
HpaII CCGG 2 cut(s) 563, 1206
HphI GGTGA 3 cut(s) 503, 593, 1115
Hpy166II GTNNAC 8 cut(s) 494, 541, 601, 676, 833, 952, 1015, 1123
Hpy188I TCNGA 2 cut(s) 345, 1338
Hpy188III TCNNGA 9 cut(s) 10, 287, 359, 413, 650, 807, 869, 1206, 1327
Hpy8I GTNNAC 8 cut(s) 494, 541, 601, 676, 833, 952, 1015, 1123
HpyAV CCTTC 2 cut(s) 632, 980
HpyCH4III ACNGT 1 cut(s) 232
HpyCH4IV ACGT 3 cut(s) 281, 304, 678
HpyCH4V TGCA 7 cut(s) 368, 505, 776, 815, 1003, 1250, 1317
HpyF10VI GCNNNNNNNGC 1 cut(s) 724
HpyF3I CTNAG 4 cut(s) 446, 713, 1237, 1325
HpySE526I ACGT 3 cut(s) 281, 304, 678
Hsp92II CATG 9 cut(s) 182, 372, 416, 509, 706, 896, 958, 1354, 1369
HspAI GCGC 1 cut(s) 176
Kpn2I TCCGGA 1 cut(s) 1205
KspI CCGCGG 1 cut(s) 58
Kzo9I GATC 4 cut(s) 27, 464, 559, 1279
LmnI GCTCC 1 cut(s) 209
Lsp1109I GCAGC 3 cut(s) 1160, 1278, 1353
LweI GCATC 2 cut(s) 492, 887
MaeI CTAG 5 cut(s) 113, 359, 497, 650, 1223
MaeII ACGT 3 cut(s) 281, 304, 678
MaeIII GTNAC 1 cut(s) 400
MalI GATC 4 cut(s) 29, 466, 561, 1281
MboI GATC 4 cut(s) 27, 464, 559, 1279
MflI RGATCY 2 cut(s) 464, 559
MluCI AATT 8 cut(s) 139, 645, 918, 922, 1085, 1251, 1272, 1358
MlyI GAGTC 2 cut(s) 1312, 1339
MmeI TCCRAC 2 cut(s) 234, 1140
MnlI CCTC 6 cut(s) 664, 699, 1064, 1111, 1160, 1163
Mph1103I ATGCAT 1 cut(s) 507
MroI TCCGGA 1 cut(s) 1205
MroXI GAANNNNTTC 1 cut(s) 597
MseI TTAA 8 cut(s) 378, 854, 921, 1025, 1080, 1095, 1143, 1275
MslI CAYNNNNRTG 1 cut(s) 1349
MspA1I CMGCKG 1 cut(s) 57
MspCI CTTAAG 1 cut(s) 1079
MspI CCGG 2 cut(s) 563, 1206
MspR9I CCNGG 2 cut(s) 564, 994
Mva1269I GAATGC 2 cut(s) 573, 1344
MvaI CCWGG 1 cut(s) 994
MvnI CGCG 1 cut(s) 57
MwoI GCNNNNNNNGC 1 cut(s) 724
NciI CCSGG 1 cut(s) 564
NdeII GATC 4 cut(s) 27, 464, 559, 1279
NlaIII CATG 9 cut(s) 182, 372, 416, 509, 706, 896, 958, 1354, 1369
NlaIV GGNNCC 1 cut(s) 991
NsbI TGCGCA 1 cut(s) 177
NsiI ATGCAT 1 cut(s) 507
NspI RCATGY 2 cut(s) 372, 958
PagI TCATGA 1 cut(s) 412
PceI AGGCCT 1 cut(s) 997
PciI ACATGT 1 cut(s) 954
PctI GAATGC 2 cut(s) 573, 1344
PdmI GAANNNNTTC 1 cut(s) 597
PfeI GAWTC 4 cut(s) 32, 803, 937, 1354
PflFI GACNNNGTC 1 cut(s) 536
PfoI TCCNGGA 1 cut(s) 562
PkrI GCNGC 4 cut(s) 56, 1175, 1293, 1343
Ple19I CGATCG 1 cut(s) 30
PleI GAGTC 2 cut(s) 1311, 1338
PpsI GAGTC 2 cut(s) 1311, 1338
Ppu21I YACGTR 1 cut(s) 679
PscI ACATGT 1 cut(s) 954
PshBI ATTAAT 2 cut(s) 921, 1275
PsiI TTATAA 1 cut(s) 1375
Psp6I CCWGG 1 cut(s) 992
PspGI CCWGG 1 cut(s) 992
PspN4I GGNNCC 1 cut(s) 991
PspPI GGNCC 1 cut(s) 1162
PsrI GAACNNNNNNTAC 2 cut(s) 816, 848
PstI CTGCAG 1 cut(s) 817
PsuI RGATCY 2 cut(s) 464, 559
PsyI GACNNNGTC 1 cut(s) 536
PvuI CGATCG 1 cut(s) 30
RsaI GTAC 4 cut(s) 234, 834, 1014, 1105
RsaNI GTAC 4 cut(s) 233, 833, 1013, 1104
RseI CAYNNNNRTG 1 cut(s) 1349
SacII CCGCGG 1 cut(s) 58
SaqAI TTAA 8 cut(s) 378, 854, 921, 1025, 1080, 1095, 1143, 1275
SatI GCNGC 4 cut(s) 55, 1174, 1292, 1342
Sau3AI GATC 4 cut(s) 27, 464, 559, 1279
Sau96I GGNCC 1 cut(s) 1162
SchI GAGTC 2 cut(s) 1312, 1339
ScrFI CCNGG 2 cut(s) 564, 994
SfaNI GCATC 2 cut(s) 492, 887
SfcI CTRYAG 2 cut(s) 813, 961
Sfr303I CCGCGG 1 cut(s) 58
SgrBI CCGCGG 1 cut(s) 58
SinI GGWCC 1 cut(s) 1162
SmiMI CAYNNNNRTG 1 cut(s) 1349
SmlI CTYRAG 3 cut(s) 154, 867, 1079
SmoI CTYRAG 3 cut(s) 154, 867, 1079
SnaBI TACGTA 1 cut(s) 679
Sse9I AATT 8 cut(s) 139, 645, 918, 922, 1085, 1251, 1272, 1358
SseBI AGGCCT 1 cut(s) 997
SsiI CCGC 2 cut(s) 55, 57
SspI AATATT 3 cut(s) 131, 354, 737
SspMI CTAG 5 cut(s) 113, 359, 497, 650, 1223
StuI AGGCCT 1 cut(s) 997
StyD4I CCNGG 2 cut(s) 562, 992
TaaI ACNGT 1 cut(s) 232
TaiI ACGT 3 cut(s) 284, 307, 681
TaqI TCGA 6 cut(s) 9, 26, 30, 806, 1020, 1056
TasI AATT 8 cut(s) 139, 645, 918, 922, 1085, 1251, 1272, 1358
TatI WGTACW 3 cut(s) 232, 832, 1103
TauI GCSGC 1 cut(s) 57
TfiI GAWTC 4 cut(s) 32, 803, 937, 1354
Tru1I TTAA 8 cut(s) 378, 854, 921, 1025, 1080, 1095, 1143, 1275
Tru9I TTAA 8 cut(s) 378, 854, 921, 1025, 1080, 1095, 1143, 1275
TscAI CASTG 1 cut(s) 1069
TseI GCWGC 3 cut(s) 1173, 1291, 1341
TspRI CASTG 1 cut(s) 1069
Tth111I GACNNNGTC 1 cut(s) 536
Vha464I CTTAAG 1 cut(s) 1079
VpaK11BI GGWCC 1 cut(s) 1162
VspI ATTAAT 2 cut(s) 921, 1275
XbaI TCTAGA 2 cut(s) 358, 649
XceI RCATGY 2 cut(s) 372, 958
XmiI GTMKAC 1 cut(s) 675
XmnI GAANNNNTTC 1 cut(s) 597
XspI CTAG 5 cut(s) 113, 359, 497, 650, 1223
Zsp2I ATGCAT 1 cut(s) 507
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.