TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 150 - 305 | 1.3e-17 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 276 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 364 |
| AccII | CGCG | 1 cut(s) | 563 |
| AciI | CCGC | 3 cut(s) | 512, 563, 891 |
| AclI | AACGTT | 1 cut(s) | 1166 |
| AclWI | GGATC | 1 cut(s) | 1196 |
| AcoI | YGGCCR | 1 cut(s) | 23 |
| AcsI | RAATTY | 5 cut(s) | 136, 344, 462, 743, 794 |
| AfaI | GTAC | 6 cut(s) | 49, 369, 622, 647, 963, 1213 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 364, 416 |
| AflIII | ACRYGT | 1 cut(s) | 714 |
| AjnI | CCWGG | 1 cut(s) | 451 |
| AluBI | AGCT | 6 cut(s) | 165, 205, 247, 290, 299, 364 |
| AluI | AGCT | 6 cut(s) | 165, 205, 247, 290, 299, 364 |
| Alw21I | GWGCWC | 1 cut(s) | 998 |
| Alw26I | GTCTC | 1 cut(s) | 321 |
| AlwI | GGATC | 1 cut(s) | 1196 |
| Ama87I | CYCGRG | 1 cut(s) | 853 |
| AoxI | GGCC | 3 cut(s) | 6, 23, 789 |
| ApeKI | GCWGC | 1 cut(s) | 173 |
| ApoI | RAATTY | 5 cut(s) | 136, 344, 462, 743, 794 |
| AseI | ATTAAT | 1 cut(s) | 753 |
| AspLEI | GCGC | 2 cut(s) | 277, 563 |
| AspS9I | GGNCC | 1 cut(s) | 7 |
| AvaI | CYCGRG | 1 cut(s) | 853 |
| AxyI | CCTNAGG | 1 cut(s) | 414 |
| BalI | TGGCCA | 1 cut(s) | 25 |
| BanII | GRGCYC | 1 cut(s) | 579 |
| Bbv12I | GWGCWC | 1 cut(s) | 998 |
| BbvI | GCAGC | 1 cut(s) | 185 |
| BccI | CCATC | 3 cut(s) | 34, 489, 945 |
| BciT130I | CCWGG | 1 cut(s) | 453 |
| BcoDI | GTCTC | 1 cut(s) | 321 |
| BfmI | CTRYAG | 1 cut(s) | 171 |
| BisI | GCNGC | 1 cut(s) | 174 |
| BlsI | GCNGC | 1 cut(s) | 175 |
| Bme1390I | CCNGG | 1 cut(s) | 453 |
| BmeT110I | CYCGRG | 1 cut(s) | 853 |
| BmgT120I | GGNCC | 1 cut(s) | 7 |
| BmiI | GGNNCC | 3 cut(s) | 9, 954, 983 |
| BmrFI | CCNGG | 1 cut(s) | 453 |
| BmrI | ACTGGG | 2 cut(s) | 197, 731 |
| BmsI | GCATC | 3 cut(s) | 70, 867, 888 |
| BmuI | ACTGGG | 2 cut(s) | 197, 731 |
| BsaJI | CCNNGG | 2 cut(s) | 734, 1205 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 750, 780 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 364, 416 |
| Bse1I | ACTGG | 3 cut(s) | 192, 726, 1219 |
| Bse21I | CCTNAGG | 1 cut(s) | 414 |
| Bse3DI | GCAATG | 2 cut(s) | 105, 637 |
| BseBI | CCWGG | 1 cut(s) | 453 |
| BseDI | CCNNGG | 2 cut(s) | 734, 1205 |
| BseGI | GGATG | 1 cut(s) | 928 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 364, 416 |
| BseMI | GCAATG | 2 cut(s) | 105, 637 |
| BseMII | CTCAG | 4 cut(s) | 221, 428, 777, 963 |
| BseNI | ACTGG | 3 cut(s) | 192, 726, 1219 |
| BseRI | GAGGAG | 5 cut(s) | 399, 402, 851, 1058, 1061 |
| BseXI | GCAGC | 1 cut(s) | 185 |
| Bsh1236I | CGCG | 1 cut(s) | 563 |
| BshFI | GGCC | 3 cut(s) | 8, 25, 791 |
| BsiHKAI | GWGCWC | 1 cut(s) | 998 |
| BsiHKCI | CYCGRG | 1 cut(s) | 853 |
| BslFI | GGGAC | 2 cut(s) | 494, 508 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 364, 416 |
| BsmAI | GTCTC | 1 cut(s) | 321 |
| BsmFI | GGGAC | 2 cut(s) | 494, 508 |
| BsmI | GAATGC | 1 cut(s) | 845 |
| BsnI | GGCC | 3 cut(s) | 8, 25, 791 |
| BsoBI | CYCGRG | 1 cut(s) | 853 |
| Bsp1286I | GDGCHC | 2 cut(s) | 579, 998 |
| Bsp143I | GATC | 3 cut(s) | 233, 975, 1201 |
| Bsp19I | CCATGG | 1 cut(s) | 734 |
| BspACI | CCGC | 3 cut(s) | 512, 563, 891 |
| BspANI | GGCC | 3 cut(s) | 8, 25, 791 |
| BspCNI | CTCAG | 4 cut(s) | 222, 427, 778, 964 |
| BspFNI | CGCG | 1 cut(s) | 563 |
| BspLI | GGNNCC | 3 cut(s) | 9, 954, 983 |
| BspMAI | CTGCAG | 1 cut(s) | 175 |
| BspPI | GGATC | 1 cut(s) | 1196 |
| BsrDI | GCAATG | 2 cut(s) | 105, 637 |
| BsrI | ACTGG | 3 cut(s) | 192, 726, 1219 |
| BssECI | CCNNGG | 2 cut(s) | 734, 1205 |
| BssMI | GATC | 3 cut(s) | 233, 975, 1201 |
| BssT1I | CCWWGG | 2 cut(s) | 734, 1205 |
| Bst2UI | CCWGG | 1 cut(s) | 453 |
| Bst4CI | ACNGT | 3 cut(s) | 315, 508, 650 |
| Bst6I | CTCTTC | 2 cut(s) | 453, 1130 |
| BstC8I | GCNNGC | 2 cut(s) | 167, 171 |
| BstDEI | CTNAG | 5 cut(s) | 196, 230, 414, 786, 972 |
| BstDSI | CCRYGG | 1 cut(s) | 734 |
| BstF5I | GGATG | 1 cut(s) | 928 |
| BstFNI | CGCG | 1 cut(s) | 563 |
| BstHHI | GCGC | 2 cut(s) | 277, 563 |
| BstKTI | GATC | 3 cut(s) | 236, 978, 1204 |
| BstMAI | GTCTC | 1 cut(s) | 321 |
| BstMBI | GATC | 3 cut(s) | 233, 975, 1201 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 296, 560 |
| BstNI | CCWGG | 1 cut(s) | 453 |
| BstNSI | RCATGY | 1 cut(s) | 718 |
| BstSCI | CCNGG | 1 cut(s) | 451 |
| BstSFI | CTRYAG | 1 cut(s) | 171 |
| BstUI | CGCG | 1 cut(s) | 563 |
| BstV1I | GCAGC | 1 cut(s) | 185 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 525 |
| Bsu36I | CCTNAGG | 1 cut(s) | 414 |
| BsuRI | GGCC | 3 cut(s) | 8, 25, 791 |
| BtgI | CCRYGG | 1 cut(s) | 734 |
| BtsCI | GGATG | 1 cut(s) | 928 |
| BtsI | GCAGTG | 1 cut(s) | 1015 |
| BtsIMutI | CAGTG | 3 cut(s) | 491, 783, 1015 |
| Cac8I | GCNNGC | 2 cut(s) | 167, 171 |
| CfoI | GCGC | 2 cut(s) | 277, 563 |
| Cfr13I | GGNCC | 1 cut(s) | 7 |
| Csp6I | GTAC | 6 cut(s) | 48, 368, 621, 646, 962, 1212 |
| CviAII | CATG | 5 cut(s) | 21, 178, 715, 735, 1151 |
| CviQI | GTAC | 6 cut(s) | 48, 368, 621, 646, 962, 1212 |
| DdeI | CTNAG | 5 cut(s) | 196, 230, 414, 786, 972 |
| DpnI | GATC | 3 cut(s) | 235, 977, 1203 |
| DpnII | GATC | 3 cut(s) | 233, 975, 1201 |
| EaeI | YGGCCR | 1 cut(s) | 23 |
| Eam1104I | CTCTTC | 2 cut(s) | 453, 1130 |
| EarI | CTCTTC | 2 cut(s) | 453, 1130 |
| Eco130I | CCWWGG | 2 cut(s) | 734, 1205 |
| Eco24I | GRGCYC | 1 cut(s) | 579 |
| Eco32I | GATATC | 1 cut(s) | 328 |
| Eco81I | CCTNAGG | 1 cut(s) | 414 |
| Eco88I | CYCGRG | 1 cut(s) | 853 |
| EcoO109I | RGGNCCY | 1 cut(s) | 7 |
| EcoRII | CCWGG | 1 cut(s) | 451 |
| EcoRV | GATATC | 1 cut(s) | 328 |
| EcoT14I | CCWWGG | 2 cut(s) | 734, 1205 |
| EcoT38I | GRGCYC | 1 cut(s) | 579 |
| ErhI | CCWWGG | 2 cut(s) | 734, 1205 |
| FaeI | CATG | 5 cut(s) | 24, 181, 718, 738, 1154 |
| FaqI | GGGAC | 2 cut(s) | 494, 508 |
| FatI | CATG | 5 cut(s) | 20, 177, 714, 734, 1150 |
| FauI | CCCGC | 1 cut(s) | 519 |
| Fnu4HI | GCNGC | 1 cut(s) | 174 |
| FokI | GGATG | 1 cut(s) | 935 |
| FriOI | GRGCYC | 1 cut(s) | 579 |
| Fsp4HI | GCNGC | 1 cut(s) | 174 |
| FspAI | RTGCGCAY | 1 cut(s) | 276 |
| FspI | TGCGCA | 1 cut(s) | 276 |
| GlaI | GCGC | 2 cut(s) | 276, 562 |
| GluI | GCNGC | 1 cut(s) | 174 |
| HaeIII | GGCC | 3 cut(s) | 8, 25, 791 |
| HhaI | GCGC | 2 cut(s) | 277, 563 |
| Hin1II | CATG | 5 cut(s) | 24, 181, 718, 738, 1154 |
| Hin6I | GCGC | 2 cut(s) | 275, 561 |
| HinP1I | GCGC | 2 cut(s) | 275, 561 |
| HinfI | GANTC | 6 cut(s) | 101, 154, 181, 821, 900, 1124 |
| Hpy166II | GTNNAC | 1 cut(s) | 769 |
| Hpy188III | TCNNGA | 8 cut(s) | 65, 144, 255, 429, 467, 941, 979, 1161 |
| Hpy8I | GTNNAC | 1 cut(s) | 769 |
| HpyAV | CCTTC | 3 cut(s) | 450, 634, 1073 |
| HpyCH4III | ACNGT | 3 cut(s) | 315, 508, 650 |
| HpyCH4IV | ACGT | 1 cut(s) | 1166 |
| HpyCH4V | TGCA | 8 cut(s) | 61, 81, 173, 222, 811, 818, 879, 1085 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 296, 560 |
| HpyF3I | CTNAG | 5 cut(s) | 196, 230, 414, 786, 972 |
| HpySE526I | ACGT | 1 cut(s) | 1166 |
| Hsp92II | CATG | 5 cut(s) | 24, 181, 718, 738, 1154 |
| HspAI | GCGC | 2 cut(s) | 275, 561 |
| Kzo9I | GATC | 3 cut(s) | 233, 975, 1201 |
| LmnI | GCTCC | 2 cut(s) | 981, 1048 |
| Lsp1109I | GCAGC | 1 cut(s) | 185 |
| LweI | GCATC | 3 cut(s) | 70, 867, 888 |
| MaeII | ACGT | 1 cut(s) | 1166 |
| MalI | GATC | 3 cut(s) | 235, 977, 1203 |
| MboI | GATC | 3 cut(s) | 233, 975, 1201 |
| MboII | GAAGA | 3 cut(s) | 227, 440, 1147 |
| MfeI | CAATTG | 2 cut(s) | 33, 76 |
| MhlI | GDGCHC | 2 cut(s) | 579, 998 |
| MlsI | TGGCCA | 1 cut(s) | 25 |
| MluNI | TGGCCA | 1 cut(s) | 25 |
| MmeI | TCCRAC | 1 cut(s) | 1149 |
| Mox20I | TGGCCA | 1 cut(s) | 25 |
| MscI | TGGCCA | 1 cut(s) | 25 |
| MseI | TTAA | 4 cut(s) | 125, 753, 1059, 1143 |
| Msp20I | TGGCCA | 1 cut(s) | 25 |
| MspR9I | CCNGG | 1 cut(s) | 453 |
| MunI | CAATTG | 2 cut(s) | 33, 76 |
| Mva1269I | GAATGC | 1 cut(s) | 845 |
| MvaI | CCWGG | 1 cut(s) | 453 |
| MvnI | CGCG | 1 cut(s) | 563 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 296, 560 |
| NcoI | CCATGG | 1 cut(s) | 734 |
| NdeII | GATC | 3 cut(s) | 233, 975, 1201 |
| NlaIII | CATG | 5 cut(s) | 24, 181, 718, 738, 1154 |
| NlaIV | GGNNCC | 3 cut(s) | 9, 954, 983 |
| NmeAIII | GCCGAG | 1 cut(s) | 977 |
| NmuCI | GTSAC | 3 cut(s) | 869, 1016, 1028 |
| NsbI | TGCGCA | 1 cut(s) | 276 |
| NspI | RCATGY | 1 cut(s) | 718 |
| PciI | ACATGT | 1 cut(s) | 714 |
| PctI | GAATGC | 1 cut(s) | 845 |
| PfeI | GAWTC | 6 cut(s) | 101, 154, 181, 821, 900, 1124 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 364 |
| PfoI | TCCNGGA | 1 cut(s) | 451 |
| PkrI | GCNGC | 1 cut(s) | 175 |
| PscI | ACATGT | 1 cut(s) | 714 |
| PshBI | ATTAAT | 1 cut(s) | 753 |
| Psp1406I | AACGTT | 1 cut(s) | 1166 |
| Psp6I | CCWGG | 1 cut(s) | 451 |
| PspGI | CCWGG | 1 cut(s) | 451 |
| PspN4I | GGNNCC | 3 cut(s) | 9, 954, 983 |
| PspPI | GGNCC | 1 cut(s) | 7 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 945, 977 |
| PstI | CTGCAG | 1 cut(s) | 175 |
| RsaI | GTAC | 6 cut(s) | 49, 369, 622, 647, 963, 1213 |
| RsaNI | GTAC | 6 cut(s) | 48, 368, 621, 646, 962, 1212 |
| SaqAI | TTAA | 4 cut(s) | 125, 753, 1059, 1143 |
| SatI | GCNGC | 1 cut(s) | 174 |
| Sau3AI | GATC | 3 cut(s) | 233, 975, 1201 |
| Sau96I | GGNCC | 1 cut(s) | 7 |
| ScrFI | CCNGG | 1 cut(s) | 453 |
| SduI | GDGCHC | 2 cut(s) | 579, 998 |
| SfaNI | GCATC | 3 cut(s) | 70, 867, 888 |
| SfcI | CTRYAG | 1 cut(s) | 171 |
| SsiI | CCGC | 3 cut(s) | 512, 563, 891 |
| StyD4I | CCNGG | 1 cut(s) | 451 |
| StyI | CCWWGG | 2 cut(s) | 734, 1205 |
| TaaI | ACNGT | 3 cut(s) | 315, 508, 650 |
| TaiI | ACGT | 1 cut(s) | 1169 |
| TaqI | TCGA | 3 cut(s) | 610, 882, 898 |
| TatI | WGTACW | 2 cut(s) | 47, 961 |
| TfiI | GAWTC | 6 cut(s) | 101, 154, 181, 821, 900, 1124 |
| Tru1I | TTAA | 4 cut(s) | 125, 753, 1059, 1143 |
| Tru9I | TTAA | 4 cut(s) | 125, 753, 1059, 1143 |
| TscAI | CASTG | 3 cut(s) | 491, 790, 1015 |
| TseFI | GTSAC | 3 cut(s) | 869, 1016, 1028 |
| TseI | GCWGC | 1 cut(s) | 173 |
| Tsp45I | GTSAC | 3 cut(s) | 869, 1016, 1028 |
| TspDTI | ATGAA | 6 cut(s) | 6, 111, 194, 240, 1116, 1167 |
| TspGWI | ACGGA | 1 cut(s) | 490 |
| TspRI | CASTG | 3 cut(s) | 491, 790, 1015 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 364 |
| VspI | ATTAAT | 1 cut(s) | 753 |
| XapI | RAATTY | 5 cut(s) | 136, 344, 462, 743, 794 |
| XceI | RCATGY | 1 cut(s) | 718 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 184, 944, 1157 |