TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 64 - 114 | 7.1e-12 | TIR domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 128 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 69 |
| AciI | CCGC | 1 cut(s) | 229 |
| AclWI | GGATC | 1 cut(s) | 325 |
| AcoI | YGGCCR | 1 cut(s) | 178 |
| AcsI | RAATTY | 2 cut(s) | 121, 208 |
| AcuI | CTGAAG | 3 cut(s) | 153, 318, 549 |
| AcyI | GRCGYC | 1 cut(s) | 282 |
| AfaI | GTAC | 1 cut(s) | 518 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 69, 555 |
| AgsI | TTSAA | 3 cut(s) | 458, 479, 743 |
| AluBI | AGCT | 7 cut(s) | 39, 112, 260, 304, 408, 533, 605 |
| AluI | AGCT | 7 cut(s) | 39, 112, 260, 304, 408, 533, 605 |
| Alw21I | GWGCWC | 1 cut(s) | 306 |
| Alw26I | GTCTC | 3 cut(s) | 388, 701, 784 |
| AlwI | GGATC | 1 cut(s) | 325 |
| Ama87I | CYCGRG | 2 cut(s) | 28, 128 |
| AoxI | GGCC | 2 cut(s) | 156, 178 |
| ApeKI | GCWGC | 2 cut(s) | 139, 559 |
| ApoI | RAATTY | 2 cut(s) | 121, 208 |
| AsuHPI | GGTGA | 2 cut(s) | 230, 752 |
| AsuNHI | GCTAGC | 1 cut(s) | 35 |
| AvaI | CYCGRG | 2 cut(s) | 28, 128 |
| AxyI | CCTNAGG | 1 cut(s) | 719 |
| BaeGI | GKGCMC | 1 cut(s) | 360 |
| BanII | GRGCYC | 1 cut(s) | 306 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 82, 114 |
| BbsI | GAAGAC | 1 cut(s) | 156 |
| Bbv12I | GWGCWC | 1 cut(s) | 306 |
| BbvI | GCAGC | 2 cut(s) | 151, 546 |
| BccI | CCATC | 3 cut(s) | 255, 636, 739 |
| BceAI | ACGGC | 1 cut(s) | 165 |
| BcoDI | GTCTC | 3 cut(s) | 388, 701, 784 |
| BfaI | CTAG | 1 cut(s) | 36 |
| BisI | GCNGC | 2 cut(s) | 140, 560 |
| BlpI | GCTNAGC | 1 cut(s) | 113 |
| BlsI | GCNGC | 2 cut(s) | 141, 561 |
| BmeT110I | CYCGRG | 2 cut(s) | 28, 128 |
| BmtI | GCTAGC | 1 cut(s) | 39 |
| BpiI | GAAGAC | 1 cut(s) | 156 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 113 |
| BsaHI | GRCGYC | 1 cut(s) | 282 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 69, 555 |
| Bse21I | CCTNAGG | 1 cut(s) | 719 |
| Bse3DI | GCAATG | 1 cut(s) | 322 |
| BseGI | GGATG | 2 cut(s) | 628, 731 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 69, 555 |
| BseMI | GCAATG | 1 cut(s) | 322 |
| BseMII | CTCAG | 3 cut(s) | 58, 104, 651 |
| BseRI | GAGGAG | 2 cut(s) | 418, 689 |
| BseSI | GKGCMC | 1 cut(s) | 360 |
| BseX3I | CGGCCG | 1 cut(s) | 178 |
| BseXI | GCAGC | 2 cut(s) | 151, 546 |
| Bsh1285I | CGRYCG | 1 cut(s) | 181 |
| BshFI | GGCC | 2 cut(s) | 158, 180 |
| BsiEI | CGRYCG | 1 cut(s) | 181 |
| BsiHKAI | GWGCWC | 1 cut(s) | 306 |
| BsiHKCI | CYCGRG | 2 cut(s) | 28, 128 |
| BsiSI | CCGG | 1 cut(s) | 177 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 69, 555 |
| BsmAI | GTCTC | 3 cut(s) | 388, 701, 784 |
| BsmI | GAATGC | 1 cut(s) | 783 |
| BsnI | GGCC | 2 cut(s) | 158, 180 |
| BsoBI | CYCGRG | 2 cut(s) | 28, 128 |
| Bsp1286I | GDGCHC | 2 cut(s) | 306, 360 |
| Bsp143I | GATC | 1 cut(s) | 330 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 113 |
| BspACI | CCGC | 1 cut(s) | 229 |
| BspANI | GGCC | 2 cut(s) | 158, 180 |
| BspCNI | CTCAG | 3 cut(s) | 57, 105, 652 |
| BspHI | TCATGA | 1 cut(s) | 682 |
| BspOI | GCTAGC | 1 cut(s) | 39 |
| BspPI | GGATC | 1 cut(s) | 325 |
| BspQI | GCTCTTC | 1 cut(s) | 294 |
| BsrDI | GCAATG | 1 cut(s) | 322 |
| BssMI | GATC | 1 cut(s) | 330 |
| BssNI | GRCGYC | 1 cut(s) | 282 |
| Bst4CI | ACNGT | 2 cut(s) | 81, 779 |
| Bst6I | CTCTTC | 2 cut(s) | 294, 453 |
| BstACI | GRCGYC | 1 cut(s) | 282 |
| BstC8I | GCNNGC | 1 cut(s) | 37 |
| BstDEI | CTNAG | 5 cut(s) | 44, 113, 554, 660, 719 |
| BstF5I | GGATG | 2 cut(s) | 628, 731 |
| BstKTI | GATC | 1 cut(s) | 333 |
| BstMAI | GTCTC | 3 cut(s) | 388, 701, 784 |
| BstMBI | GATC | 1 cut(s) | 330 |
| BstMCI | CGRYCG | 1 cut(s) | 181 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 45, 281 |
| BstNSI | RCATGY | 1 cut(s) | 772 |
| BstSLI | GKGCMC | 1 cut(s) | 360 |
| BstV1I | GCAGC | 2 cut(s) | 151, 546 |
| BstV2I | GAAGAC | 1 cut(s) | 156 |
| BstX2I | RGATCY | 1 cut(s) | 330 |
| BstYI | RGATCY | 1 cut(s) | 330 |
| BstZI | CGGCCG | 1 cut(s) | 178 |
| Bsu36I | CCTNAGG | 1 cut(s) | 719 |
| BsuRI | GGCC | 2 cut(s) | 158, 180 |
| BtsCI | GGATG | 2 cut(s) | 628, 731 |
| BtsI | GCAGTG | 1 cut(s) | 149 |
| BtsIMutI | CAGTG | 2 cut(s) | 77, 149 |
| Cac8I | GCNNGC | 1 cut(s) | 37 |
| CciI | TCATGA | 1 cut(s) | 682 |
| CseI | GACGC | 3 cut(s) | 162, 290, 425 |
| Csp6I | GTAC | 1 cut(s) | 517 |
| CviAII | CATG | 5 cut(s) | 107, 194, 612, 683, 769 |
| CviQI | GTAC | 1 cut(s) | 517 |
| DdeI | CTNAG | 5 cut(s) | 44, 113, 554, 660, 719 |
| DpnI | GATC | 1 cut(s) | 332 |
| DpnII | GATC | 1 cut(s) | 330 |
| EaeI | YGGCCR | 1 cut(s) | 178 |
| EagI | CGGCCG | 1 cut(s) | 178 |
| Eam1104I | CTCTTC | 2 cut(s) | 294, 453 |
| EarI | CTCTTC | 2 cut(s) | 294, 453 |
| Ecl136II | GAGCTC | 1 cut(s) | 304 |
| EclXI | CGGCCG | 1 cut(s) | 178 |
| Eco24I | GRGCYC | 1 cut(s) | 306 |
| Eco52I | CGGCCG | 1 cut(s) | 178 |
| Eco53kI | GAGCTC | 1 cut(s) | 304 |
| Eco57I | CTGAAG | 3 cut(s) | 153, 318, 549 |
| Eco81I | CCTNAGG | 1 cut(s) | 719 |
| Eco88I | CYCGRG | 2 cut(s) | 28, 128 |
| EcoICRI | GAGCTC | 1 cut(s) | 304 |
| EcoT38I | GRGCYC | 1 cut(s) | 306 |
| FaeI | CATG | 5 cut(s) | 110, 197, 615, 686, 772 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 392, 424 |
| FatI | CATG | 5 cut(s) | 106, 193, 611, 682, 768 |
| FauI | CCCGC | 1 cut(s) | 236 |
| Fnu4HI | GCNGC | 2 cut(s) | 140, 560 |
| FokI | GGATG | 2 cut(s) | 615, 718 |
| FriOI | GRGCYC | 1 cut(s) | 306 |
| Fsp4HI | GCNGC | 2 cut(s) | 140, 560 |
| FspBI | CTAG | 1 cut(s) | 36 |
| GluI | GCNGC | 2 cut(s) | 140, 560 |
| HaeIII | GGCC | 2 cut(s) | 158, 180 |
| HapII | CCGG | 1 cut(s) | 177 |
| HgaI | GACGC | 3 cut(s) | 162, 290, 425 |
| Hin1I | GRCGYC | 1 cut(s) | 282 |
| Hin1II | CATG | 5 cut(s) | 110, 197, 615, 686, 772 |
| HindIII | AAGCTT | 1 cut(s) | 531 |
| HinfI | GANTC | 6 cut(s) | 59, 293, 470, 590, 751, 792 |
| HpaII | CCGG | 1 cut(s) | 177 |
| HphI | GGTGA | 2 cut(s) | 230, 752 |
| Hpy166II | GTNNAC | 3 cut(s) | 517, 647, 760 |
| Hpy188III | TCNNGA | 2 cut(s) | 434, 683 |
| Hpy8I | GTNNAC | 3 cut(s) | 517, 647, 760 |
| Hpy99I | CGWCG | 2 cut(s) | 186, 284 |
| HpyAV | CCTTC | 3 cut(s) | 80, 84, 295 |
| HpyCH4III | ACNGT | 2 cut(s) | 81, 779 |
| HpyCH4V | TGCA | 1 cut(s) | 139 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 45, 281 |
| HpyF3I | CTNAG | 5 cut(s) | 44, 113, 554, 660, 719 |
| Hsp92I | GRCGYC | 1 cut(s) | 282 |
| Hsp92II | CATG | 5 cut(s) | 110, 197, 615, 686, 772 |
| Kzo9I | GATC | 1 cut(s) | 330 |
| LguI | GCTCTTC | 1 cut(s) | 294 |
| LmnI | GCTCC | 2 cut(s) | 309, 405 |
| LpnPI | CCDG | 4 cut(s) | 55, 190, 200, 688 |
| Lsp1109I | GCAGC | 2 cut(s) | 151, 546 |
| MaeI | CTAG | 1 cut(s) | 36 |
| MaeIII | GTNAC | 1 cut(s) | 572 |
| MalI | GATC | 1 cut(s) | 332 |
| MboI | GATC | 1 cut(s) | 330 |
| MboII | GAAGA | 6 cut(s) | 16, 156, 159, 311, 353, 470 |
| MflI | RGATCY | 1 cut(s) | 330 |
| MhlI | GDGCHC | 2 cut(s) | 306, 360 |
| MluCI | AATT | 3 cut(s) | 121, 208, 736 |
| MlyI | GAGTC | 4 cut(s) | 53, 287, 584, 786 |
| MmeI | TCCRAC | 1 cut(s) | 63 |
| MseI | TTAA | 3 cut(s) | 152, 521, 668 |
| MslI | CAYNNNNRTG | 1 cut(s) | 633 |
| MspI | CCGG | 1 cut(s) | 177 |
| Mva1269I | GAATGC | 1 cut(s) | 783 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 45, 281 |
| NdeII | GATC | 1 cut(s) | 330 |
| NheI | GCTAGC | 1 cut(s) | 35 |
| NlaIII | CATG | 5 cut(s) | 110, 197, 615, 686, 772 |
| NspI | RCATGY | 1 cut(s) | 772 |
| PaeR7I | CTCGAG | 1 cut(s) | 128 |
| PagI | TCATGA | 1 cut(s) | 682 |
| PciSI | GCTCTTC | 1 cut(s) | 294 |
| PctI | GAATGC | 1 cut(s) | 783 |
| PfeI | GAWTC | 2 cut(s) | 470, 751 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 69 |
| PkrI | GCNGC | 2 cut(s) | 141, 561 |
| PleI | GAGTC | 4 cut(s) | 53, 287, 584, 786 |
| PpsI | GAGTC | 4 cut(s) | 53, 287, 584, 786 |
| Psp124BI | GAGCTC | 1 cut(s) | 306 |
| PspXI | VCTCGAGB | 1 cut(s) | 128 |
| PsuI | RGATCY | 1 cut(s) | 330 |
| RsaI | GTAC | 1 cut(s) | 518 |
| RsaNI | GTAC | 1 cut(s) | 517 |
| RseI | CAYNNNNRTG | 1 cut(s) | 633 |
| SacI | GAGCTC | 1 cut(s) | 306 |
| SapI | GCTCTTC | 1 cut(s) | 294 |
| SaqAI | TTAA | 3 cut(s) | 152, 521, 668 |
| SatI | GCNGC | 2 cut(s) | 140, 560 |
| Sau3AI | GATC | 1 cut(s) | 330 |
| SchI | GAGTC | 4 cut(s) | 53, 287, 584, 786 |
| SduI | GDGCHC | 2 cut(s) | 306, 360 |
| Sfr274I | CTCGAG | 1 cut(s) | 128 |
| SlaI | CTCGAG | 1 cut(s) | 128 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 633 |
| SmlI | CTYRAG | 1 cut(s) | 128 |
| SmoI | CTYRAG | 1 cut(s) | 128 |
| Sse9I | AATT | 3 cut(s) | 121, 208, 736 |
| SsiI | CCGC | 1 cut(s) | 229 |
| SspMI | CTAG | 1 cut(s) | 36 |
| SstI | GAGCTC | 1 cut(s) | 306 |
| TaaI | ACNGT | 2 cut(s) | 81, 779 |
| TaqI | TCGA | 2 cut(s) | 129, 279 |
| TasI | AATT | 3 cut(s) | 121, 208, 736 |
| TatI | WGTACW | 1 cut(s) | 516 |
| TfiI | GAWTC | 2 cut(s) | 470, 751 |
| Tru1I | TTAA | 3 cut(s) | 152, 521, 668 |
| Tru9I | TTAA | 3 cut(s) | 152, 521, 668 |
| TscAI | CASTG | 2 cut(s) | 84, 149 |
| TseI | GCWGC | 2 cut(s) | 139, 559 |
| TspDTI | ATGAA | 4 cut(s) | 17, 277, 354, 600 |
| TspGWI | ACGGA | 2 cut(s) | 482, 560 |
| TspRI | CASTG | 2 cut(s) | 84, 149 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 69 |
| XapI | RAATTY | 2 cut(s) | 121, 208 |
| XceI | RCATGY | 1 cut(s) | 772 |
| XhoI | CTCGAG | 1 cut(s) | 128 |
| XspI | CTAG | 1 cut(s) | 36 |