MD00G1131100.v1.1

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Reverse (-)
28232275 .. 28233981
1707 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1131100.v1.1.491

Sequence Viewer

Length: 1707 bp
ATGCCTTGTTATGTAACATATGTTTTTGCGAATGTTTTTCGACAGCCTCTCGAAAAGTTGAAAGTTATCAATCTAAAAGGCTCTCAACTGGAAGAAACTCCCGACTTCACCAAGGCAAGAAATCTTGAGAAACTAATTCTTGATGGTTGTACAAGTTTATCTGAGGTTCACCCATCCATTTGGGCTCTCGAAAAACTTGTCCTCTTGGATCTAAGTTGGTGCTACAGACTCCAGACTATTTCAAGCATCAGTTGTATGAAATCTCTTGAAACCCTTAATCTTTCTTTTTGCTCAAACATTGAGAAGTTCCCAGAGATTTTAGAAGTTATGGAGAAGCTTTCAAAGCTGTGTTTGCGAGGGACATCGATGAAAGAACTGCCTCGATCAATTAACAATCTTACGGGGCTTGTTACTTTAAACCTTGAATGTTGCAGAGAGCTTGAGATGCTTCCAAGCAGCATTGTTCAACTCAAGTCGCTTAAATTTCTTTATCTTTCTGGTTGTTCAAAGCTTGAGGCCTTTCCGAAAAATGTGGAAAATATGGAAGGTTTAAAAGAGCTTTGCCTGGATGAAACATCCGTTAGAGAGCTTTGCCCATCAATTTTCTTTCTGCAAAACCTTGAGCGTTTGAGTCTGGAGCAGTGCACAAAACTTCATAGTCTTCCGAGCAGCATTCATATGAGATCCCTTCGAAACCTTAATCTTTCTGGCTGCTCAAATTTGGAGAGGTTTCCAGAAATTCCTGAGGTTATGGAGAACCTATCAGAGCTTTATGTAGATGGGACTGGAATAGCAGAACTGCCATCATCCATTAAAAATTTTACGGGGCTCGTTACTTTGAACATGAAGGGTTGTAAAAGATTTAAGGTTCTTCCAAGCAGCATTCATATGAGATCTCTTCAAGCCCTAAATCTTTCTGGCTGCTCAAATCTGATGAATTTTCCTATGATTCTAGAAGTTATGGAGAACCTATCAGAGCTTCACTTAGATTGGTTTGTTTACTCAACAAAATTTGAAAAACCTACAGAGCTAGATTCGTCTTTAGACTCAACAACATCTAATAATCTTACAGAGCATGAAGGATATATTCAAGATCATCGAACCTTTACCAACCAATATCTTCAGCAGCTTCCTCATGTTTCAGGGATTGCAATCAAAGAATTGCCATCGGTAATTTATAATCTTACCGGGATTGTTACTTTGACGCTACGGTATAGCAAAGGCTTTAAGCGTCTGACAAGCAGAATTTGTCAACTCAAGTCCCTTAATTATCTTTCTCTTTCTGGTTGTACAAAGTTTGAGGTGTTTCCGGACATTGTAGAAAATATGGAAAGATTAGCCAGCCTTGATCTGGATGAAACATCTATCAGAGAGCTTCCCCAATCAATCGAACGGCTTCAGGGGCTTGTGTCGTTAAATCTGAAAAACTGCAAAAACCTTGTCTATCTTCCGGACAGTATCTGCAATTTGTTAAGTCTTGAATGGCTCACTCTCAGTGGGTGCTCAAAACTTTCTAAGTTGCCTGAGGACTTGTTGTATTTGAAGCGCCTTGATGTAAAGGGAACTGGTAAAAAACAGCGATATTTCAGCACTTTGGGGGAGTTGGCTCAGTTTCGAAGCACTGCACCTTTGATTGATATTGCAGGCTCAAGTATGAGCACAAGGAGGCGCTGGCTGATGGGGGAGTCCTCTAGAGCGATGATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

569

Amino Acids

64.47

Weight (kDa)

7.03

Isoelectric Point (pI)

40.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_13 PF23286 87 - 171 2.4e-16 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 113 - 192 1.2e-12 Leucine-rich repeat region
LRR_14 PF23598 210 - 340 1.3e-09 Leucine-rich repeat region
LRR_13 PF23286 228 - 312 2.2e-13 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 381 - 450 3.3e-07 Leucine-rich repeat region
LRR_13 PF23286 419 - 505 5.5e-12 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 442 - 540 4.5e-10 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1179
AccIII TCCGGA 2 cut(s) 1309, 1450
AclWI GGATC 2 cut(s) 216, 678
AcsI RAATTY 7 cut(s) 482, 718, 738, 817, 937, 1010, 1245
AcuI CTGAAG 2 cut(s) 1106, 1382
AfaI GTAC 2 cut(s) 151, 1291
AfiI CCNNNNNNNGG 1 cut(s) 1351
AjnI CCWGG 1 cut(s) 564
Alw21I GWGCWC 3 cut(s) 647, 1505, 1661
Alw44I GTGCAC 1 cut(s) 643
AlwI GGATC 2 cut(s) 216, 678
AlwNI CAGNNNCTG 1 cut(s) 1461
Aor13HI TCCGGA 2 cut(s) 1309, 1450
AoxI GGCC 1 cut(s) 516
ApaLI GTGCAC 1 cut(s) 643
ApeKI GCWGC 6 cut(s) 456, 669, 711, 879, 921, 1126
ApoI RAATTY 7 cut(s) 482, 718, 738, 817, 937, 1010, 1245
ArsI GACNNNNNNTTYG 4 cut(s) 183, 215, 1425, 1457
Asp700I GAANNNNTTC 1 cut(s) 1395
AspLEI GCGC 2 cut(s) 1548, 1671
AsuC2I CCSGG 1 cut(s) 1189
AsuHPI GGTGA 2 cut(s) 100, 161
AsuII TTCGAA 2 cut(s) 691, 1615
AxyI CCTNAGG 2 cut(s) 744, 1524
BaeGI GKGCMC 1 cut(s) 647
BanII GRGCYC 2 cut(s) 187, 831
BbsI GAAGAC 1 cut(s) 653
Bbv12I GWGCWC 3 cut(s) 647, 1505, 1661
BbvI GCAGC 6 cut(s) 468, 681, 698, 891, 908, 1138
BccI CCATC 7 cut(s) 137, 181, 604, 773, 811, 1174, 1672
BceAI ACGGC 1 cut(s) 1409
BciT130I CCWGG 1 cut(s) 566
BcnI CCSGG 1 cut(s) 1189
BfaI CTAG 3 cut(s) 953, 1031, 1692
BfmI CTRYAG 2 cut(s) 223, 1023
BfoI RGCGCY 2 cut(s) 1549, 1672
BglII AGATCT 1 cut(s) 893
BisI GCNGC 6 cut(s) 457, 670, 712, 880, 922, 1127
BlsI GCNGC 6 cut(s) 458, 671, 713, 881, 923, 1128
Bme1390I CCNGG 2 cut(s) 566, 1189
BmrFI CCNGG 2 cut(s) 566, 1189
BmsI GCATC 2 cut(s) 255, 435
BpiI GAAGAC 1 cut(s) 653
BpmI CTGGAG 2 cut(s) 215, 656
Bpu14I TTCGAA 2 cut(s) 691, 1615
BpuEI CTTGAG 7 cut(s) 146, 455, 461, 533, 641, 1241, 1633
BpuMI CCSGG 1 cut(s) 1189
Bsa29I ATCGAT 1 cut(s) 365
BsaBI GATNNNNATC 1 cut(s) 1151
BsaJI CCNNGG 1 cut(s) 111
BsaWI WCCGGW 2 cut(s) 1309, 1450
Bsc4I CCNNNNNNNGG 1 cut(s) 1351
Bse1I ACTGG 3 cut(s) 93, 790, 1570
Bse21I CCTNAGG 2 cut(s) 744, 1524
Bse8I GATNNNNATC 1 cut(s) 1151
BseAI TCCGGA 2 cut(s) 1309, 1450
BseBI CCWGG 1 cut(s) 566
BseCI ATCGAT 1 cut(s) 365
BseDI CCNNGG 1 cut(s) 111
BseGI GGATG 5 cut(s) 173, 574, 575, 806, 1360
BseJI GATNNNNATC 1 cut(s) 1151
BseLI CCNNNNNNNGG 1 cut(s) 1351
BseMII CTCAG 5 cut(s) 153, 735, 1507, 1515, 1622
BseNI ACTGG 3 cut(s) 93, 790, 1570
BseSI GKGCMC 1 cut(s) 647
BseXI GCAGC 6 cut(s) 468, 681, 698, 891, 908, 1138
BsgI GTGCAG 1 cut(s) 1608
BshFI GGCC 1 cut(s) 518
BshVI ATCGAT 1 cut(s) 365
BsiHKAI GWGCWC 3 cut(s) 647, 1505, 1661
BsiSI CCGG 3 cut(s) 1188, 1310, 1451
BslFI GGGAC 3 cut(s) 373, 796, 1246
BslI CCNNNNNNNGG 1 cut(s) 1351
BsmFI GGGAC 3 cut(s) 373, 796, 1246
BsmI GAATGC 2 cut(s) 672, 882
BsnI GGCC 1 cut(s) 518
Bsp119I TTCGAA 2 cut(s) 691, 1615
Bsp1286I GDGCHC 5 cut(s) 187, 647, 831, 1505, 1661
Bsp13I TCCGGA 2 cut(s) 1309, 1450
Bsp1407I TGTACA 2 cut(s) 149, 1289
Bsp143I GATC 6 cut(s) 208, 383, 683, 893, 1093, 1348
BspANI GGCC 1 cut(s) 518
BspCNI CTCAG 5 cut(s) 154, 736, 1506, 1516, 1621
BspDI ATCGAT 1 cut(s) 365
BspEI TCCGGA 2 cut(s) 1309, 1450
BspPI GGATC 2 cut(s) 216, 678
BspT104I TTCGAA 2 cut(s) 691, 1615
BsrGI TGTACA 2 cut(s) 149, 1289
BsrI ACTGG 3 cut(s) 93, 790, 1570
BssECI CCNNGG 1 cut(s) 111
BssMI GATC 6 cut(s) 208, 383, 683, 893, 1093, 1348
BssT1I CCWWGG 1 cut(s) 111
Bst2UI CCWGG 1 cut(s) 566
Bst4CI ACNGT 2 cut(s) 1212, 1457
Bst6I CTCTTC 1 cut(s) 903
BstAUI TGTACA 2 cut(s) 149, 1289
BstBI TTCGAA 2 cut(s) 691, 1615
BstC8I GCNNGC 3 cut(s) 1342, 1645, 1673
BstDEI CTNAG 8 cut(s) 162, 212, 744, 985, 1493, 1515, 1524, 1608
BstF5I GGATG 5 cut(s) 173, 574, 575, 806, 1360
BstH2I RGCGCY 2 cut(s) 1549, 1672
BstHHI GCGC 2 cut(s) 1548, 1671
BstKTI GATC 6 cut(s) 211, 386, 686, 896, 1096, 1351
BstMBI GATC 6 cut(s) 208, 383, 683, 893, 1093, 1348
BstMWI GCNNNNNNNGC 4 cut(s) 343, 352, 445, 1402
BstNI CCWGG 1 cut(s) 566
BstSCI CCNGG 2 cut(s) 564, 1187
BstSFI CTRYAG 2 cut(s) 223, 1023
BstSLI GKGCMC 1 cut(s) 647
BstV1I GCAGC 6 cut(s) 468, 681, 698, 891, 908, 1138
BstV2I GAAGAC 1 cut(s) 653
BstX2I RGATCY 3 cut(s) 208, 683, 893
BstXI CCANNNNNNTGG 1 cut(s) 180
BstYI RGATCY 3 cut(s) 208, 683, 893
Bsu15I ATCGAT 1 cut(s) 365
Bsu36I CCTNAGG 2 cut(s) 744, 1524
BsuRI GGCC 1 cut(s) 518
BsuTUI ATCGAT 1 cut(s) 365
BtsCI GGATG 5 cut(s) 173, 574, 575, 806, 1360
BtsI GCAGTG 2 cut(s) 647, 1620
BtsIMutI CAGTG 3 cut(s) 647, 1501, 1620
Cac8I GCNNGC 3 cut(s) 1342, 1645, 1673
CaiI CAGNNNCTG 1 cut(s) 1461
CfoI GCGC 2 cut(s) 1548, 1671
ClaI ATCGAT 1 cut(s) 365
CseI GACGC 2 cut(s) 1213, 1220
Csp6I GTAC 2 cut(s) 150, 1290
CviAII CATG 3 cut(s) 844, 1076, 1136
CviQI GTAC 2 cut(s) 150, 1290
DdeI CTNAG 8 cut(s) 162, 212, 744, 985, 1493, 1515, 1524, 1608
DpnI GATC 6 cut(s) 210, 385, 685, 895, 1095, 1350
DpnII GATC 6 cut(s) 208, 383, 683, 893, 1093, 1348
DraI TTTAAA 2 cut(s) 417, 552
Eam1104I CTCTTC 1 cut(s) 903
EarI CTCTTC 1 cut(s) 903
Eco130I CCWWGG 1 cut(s) 111
Eco147I AGGCCT 1 cut(s) 518
Eco24I GRGCYC 2 cut(s) 187, 831
Eco57I CTGAAG 2 cut(s) 1106, 1382
Eco81I CCTNAGG 2 cut(s) 744, 1524
EcoRII CCWGG 1 cut(s) 564
EcoT14I CCWWGG 1 cut(s) 111
EcoT38I GRGCYC 2 cut(s) 187, 831
ErhI CCWWGG 1 cut(s) 111
FaeI CATG 3 cut(s) 847, 1079, 1139
FaqI GGGAC 3 cut(s) 373, 796, 1246
FatI CATG 3 cut(s) 843, 1075, 1135
FauNDI CATATG 3 cut(s) 19, 678, 888
Fnu4HI GCNGC 6 cut(s) 457, 670, 712, 880, 922, 1127
FokI GGATG 5 cut(s) 160, 562, 581, 793, 1367
FriOI GRGCYC 2 cut(s) 187, 831
Fsp4HI GCNGC 6 cut(s) 457, 670, 712, 880, 922, 1127
FspBI CTAG 3 cut(s) 953, 1031, 1692
GlaI GCGC 2 cut(s) 1547, 1670
GluI GCNGC 6 cut(s) 457, 670, 712, 880, 922, 1127
GsuI CTGGAG 2 cut(s) 215, 656
HaeII RGCGCY 2 cut(s) 1549, 1672
HaeIII GGCC 1 cut(s) 518
HapII CCGG 3 cut(s) 1188, 1310, 1451
HgaI GACGC 2 cut(s) 1213, 1220
HhaI GCGC 2 cut(s) 1548, 1671
Hin1II CATG 3 cut(s) 847, 1079, 1139
Hin6I GCGC 2 cut(s) 1546, 1669
HinP1I GCGC 2 cut(s) 1546, 1669
HincII GTYRAC 1 cut(s) 1253
HindII GTYRAC 1 cut(s) 1253
HindIII AAGCTT 2 cut(s) 335, 509
HinfI GANTC 6 cut(s) 228, 631, 949, 1034, 1046, 1685
HpaII CCGG 3 cut(s) 1188, 1310, 1451
HphI GGTGA 2 cut(s) 100, 161
Hpy166II GTNNAC 4 cut(s) 169, 645, 1000, 1253
Hpy188I TCNGA 9 cut(s) 163, 525, 666, 766, 933, 976, 1236, 1370, 1422
Hpy8I GTNNAC 4 cut(s) 169, 645, 1000, 1253
HpyAV CCTTC 4 cut(s) 539, 698, 841, 1073
HpyCH4III ACNGT 2 cut(s) 1212, 1457
HpyCH4V TGCA 8 cut(s) 432, 613, 645, 1151, 1431, 1464, 1625, 1643
HpyF10VI GCNNNNNNNGC 4 cut(s) 343, 352, 445, 1402
HpyF3I CTNAG 8 cut(s) 162, 212, 744, 985, 1493, 1515, 1524, 1608
Hsp92II CATG 3 cut(s) 847, 1079, 1139
HspAI GCGC 2 cut(s) 1546, 1669
Kpn2I TCCGGA 2 cut(s) 1309, 1450
Kzo9I GATC 6 cut(s) 208, 383, 683, 893, 1093, 1348
LmnI GCTCC 1 cut(s) 637
Lsp1109I GCAGC 6 cut(s) 468, 681, 698, 891, 908, 1138
LweI GCATC 2 cut(s) 255, 435
MaeI CTAG 3 cut(s) 953, 1031, 1692
MaeIII GTNAC 4 cut(s) 13, 409, 832, 1195
MalI GATC 6 cut(s) 210, 385, 685, 895, 1095, 1350
MboI GATC 6 cut(s) 208, 383, 683, 893, 1093, 1348
MboII GAAGA 6 cut(s) 104, 653, 863, 890, 1112, 1439
MflI RGATCY 3 cut(s) 208, 683, 893
MhlI GDGCHC 5 cut(s) 187, 647, 831, 1505, 1661
MlyI GAGTC 4 cut(s) 222, 640, 1040, 1694
MroI TCCGGA 2 cut(s) 1309, 1450
MroXI GAANNNNTTC 1 cut(s) 1395
MslI CAYNNNNRTG 2 cut(s) 677, 887
MspI CCGG 3 cut(s) 1188, 1310, 1451
MspR9I CCNGG 2 cut(s) 566, 1189
Mva1269I GAATGC 2 cut(s) 672, 882
MvaI CCWGG 1 cut(s) 566
MwoI GCNNNNNNNGC 4 cut(s) 343, 352, 445, 1402
NciI CCSGG 1 cut(s) 1189
NdeI CATATG 3 cut(s) 19, 678, 888
NdeII GATC 6 cut(s) 208, 383, 683, 893, 1093, 1348
NlaIII CATG 3 cut(s) 847, 1079, 1139
NspV TTCGAA 2 cut(s) 691, 1615
PceI AGGCCT 1 cut(s) 518
PctI GAATGC 2 cut(s) 672, 882
PdmI GAANNNNTTC 1 cut(s) 1395
PfeI GAWTC 2 cut(s) 949, 1034
PkrI GCNGC 6 cut(s) 458, 671, 713, 881, 923, 1128
PleI GAGTC 4 cut(s) 222, 639, 1040, 1693
PpsI GAGTC 4 cut(s) 222, 639, 1040, 1693
PsiI TTATAA 1 cut(s) 1179
Psp6I CCWGG 1 cut(s) 564
PspGI CCWGG 1 cut(s) 564
PstNI CAGNNNCTG 1 cut(s) 1461
PsuI RGATCY 3 cut(s) 208, 683, 893
RsaI GTAC 2 cut(s) 151, 1291
RsaNI GTAC 2 cut(s) 150, 1290
RseI CAYNNNNRTG 2 cut(s) 677, 887
SatI GCNGC 6 cut(s) 457, 670, 712, 880, 922, 1127
Sau3AI GATC 6 cut(s) 208, 383, 683, 893, 1093, 1348
SchI GAGTC 4 cut(s) 222, 640, 1040, 1694
ScrFI CCNGG 2 cut(s) 566, 1189
SduI GDGCHC 5 cut(s) 187, 647, 831, 1505, 1661
SfaNI GCATC 2 cut(s) 255, 435
SfcI CTRYAG 2 cut(s) 223, 1023
SfuI TTCGAA 2 cut(s) 691, 1615
SmiMI CAYNNNNRTG 2 cut(s) 677, 887
SmlI CTYRAG 7 cut(s) 125, 440, 470, 512, 620, 1256, 1648
SmoI CTYRAG 7 cut(s) 125, 440, 470, 512, 620, 1256, 1648
SseBI AGGCCT 1 cut(s) 518
SspMI CTAG 3 cut(s) 953, 1031, 1692
StuI AGGCCT 1 cut(s) 518
StyD4I CCNGG 2 cut(s) 564, 1187
StyI CCWWGG 1 cut(s) 111
TaaI ACNGT 2 cut(s) 1212, 1457
TaqI TCGA 9 cut(s) 40, 51, 189, 365, 382, 691, 1099, 1389, 1615
TatI WGTACW 2 cut(s) 149, 1289
TfiI GAWTC 2 cut(s) 949, 1034
TscAI CASTG 3 cut(s) 647, 1501, 1627
TseI GCWGC 6 cut(s) 456, 669, 711, 879, 921, 1126
TspGWI ACGGA 1 cut(s) 568
TspRI CASTG 3 cut(s) 647, 1501, 1627
VneI GTGCAC 1 cut(s) 643
XapI RAATTY 7 cut(s) 482, 718, 738, 817, 937, 1010, 1245
XbaI TCTAGA 2 cut(s) 952, 1691
XcmI CCANNNNNNNNNTGG 1 cut(s) 1348
XmnI GAANNNNTTC 1 cut(s) 1395
XspI CTAG 3 cut(s) 953, 1031, 1692
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.