TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NIF | PF03031 | 135 - 232 | 5e-21 | NLI interacting factor-like phosphatase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 850 |
| AciI | CCGC | 2 cut(s) | 32, 243 |
| AclWI | GGATC | 1 cut(s) | 516 |
| AcoI | YGGCCR | 1 cut(s) | 136 |
| AcsI | RAATTY | 2 cut(s) | 594, 790 |
| AfaI | GTAC | 3 cut(s) | 184, 782, 811 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 44, 590 |
| AgeI | ACCGGT | 1 cut(s) | 298 |
| AgsI | TTSAA | 6 cut(s) | 119, 202, 251, 589, 737, 756 |
| AjiI | CACGTC | 2 cut(s) | 51, 691 |
| AjnI | CCWGG | 1 cut(s) | 312 |
| AluBI | AGCT | 5 cut(s) | 131, 295, 351, 386, 640 |
| AluI | AGCT | 5 cut(s) | 131, 295, 351, 386, 640 |
| Alw21I | GWGCWC | 3 cut(s) | 133, 234, 605 |
| Alw26I | GTCTC | 3 cut(s) | 57, 314, 688 |
| Alw44I | GTGCAC | 1 cut(s) | 601 |
| AlwI | GGATC | 1 cut(s) | 516 |
| Ama87I | CYCGRG | 3 cut(s) | 188, 227, 356 |
| AoxI | GGCC | 4 cut(s) | 136, 467, 517, 535 |
| ApaLI | GTGCAC | 1 cut(s) | 601 |
| ApoI | RAATTY | 2 cut(s) | 594, 790 |
| AsiGI | ACCGGT | 1 cut(s) | 298 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 446, 732, 751 |
| AspS9I | GGNCC | 1 cut(s) | 535 |
| AsuC2I | CCSGG | 2 cut(s) | 357, 358 |
| AvaI | CYCGRG | 3 cut(s) | 188, 227, 356 |
| BaeGI | GKGCMC | 2 cut(s) | 50, 605 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 791, 824 |
| BanII | GRGCYC | 1 cut(s) | 133 |
| BbsI | GAAGAC | 2 cut(s) | 159, 168 |
| Bbv12I | GWGCWC | 3 cut(s) | 133, 234, 605 |
| BccI | CCATC | 2 cut(s) | 150, 756 |
| BceAI | ACGGC | 1 cut(s) | 230 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 324, 358 |
| BciT130I | CCWGG | 1 cut(s) | 314 |
| BcnI | CCSGG | 2 cut(s) | 357, 358 |
| BcoDI | GTCTC | 3 cut(s) | 57, 314, 688 |
| BfaI | CTAG | 4 cut(s) | 326, 411, 759, 819 |
| BfmI | CTRYAG | 1 cut(s) | 680 |
| BglII | AGATCT | 1 cut(s) | 108 |
| BlpI | GCTNAGC | 1 cut(s) | 618 |
| Bme1390I | CCNGG | 3 cut(s) | 314, 357, 358 |
| BmeT110I | CYCGRG | 3 cut(s) | 188, 227, 356 |
| BmgBI | CACGTC | 2 cut(s) | 51, 691 |
| BmgT120I | GGNCC | 1 cut(s) | 535 |
| BmiI | GGNNCC | 1 cut(s) | 36 |
| BmrFI | CCNGG | 3 cut(s) | 314, 357, 358 |
| BmsI | GCATC | 1 cut(s) | 845 |
| BpiI | GAAGAC | 2 cut(s) | 159, 168 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 221, 253 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 618 |
| BpuEI | CTTGAG | 2 cut(s) | 48, 650 |
| BpuMI | CCSGG | 2 cut(s) | 357, 358 |
| Bsa29I | ATCGAT | 1 cut(s) | 255 |
| BsaI | GGTCTC | 1 cut(s) | 688 |
| BsaJI | CCNNGG | 2 cut(s) | 189, 356 |
| BsaWI | WCCGGW | 1 cut(s) | 298 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 44, 590 |
| Bse118I | RCCGGY | 2 cut(s) | 211, 298 |
| Bse1I | ACTGG | 1 cut(s) | 92 |
| BseBI | CCWGG | 1 cut(s) | 314 |
| BseCI | ATCGAT | 1 cut(s) | 255 |
| BseDI | CCNNGG | 2 cut(s) | 189, 356 |
| BseGI | GGATG | 2 cut(s) | 142, 322 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 44, 590 |
| BseMII | CTCAG | 1 cut(s) | 609 |
| BseNI | ACTGG | 1 cut(s) | 92 |
| BseSI | GKGCMC | 2 cut(s) | 50, 605 |
| BshFI | GGCC | 4 cut(s) | 138, 469, 519, 537 |
| BshTI | ACCGGT | 1 cut(s) | 298 |
| BshVI | ATCGAT | 1 cut(s) | 255 |
| BsiHKAI | GWGCWC | 3 cut(s) | 133, 234, 605 |
| BsiHKCI | CYCGRG | 3 cut(s) | 188, 227, 356 |
| BsiSI | CCGG | 3 cut(s) | 212, 299, 357 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 44, 590 |
| BsmAI | GTCTC | 3 cut(s) | 57, 314, 688 |
| BsmBI | CGTCTC | 2 cut(s) | 57, 314 |
| BsnI | GGCC | 4 cut(s) | 138, 469, 519, 537 |
| Bso31I | GGTCTC | 1 cut(s) | 688 |
| BsoBI | CYCGRG | 3 cut(s) | 188, 227, 356 |
| Bsp1286I | GDGCHC | 4 cut(s) | 50, 133, 234, 605 |
| Bsp1407I | TGTACA | 1 cut(s) | 780 |
| Bsp143I | GATC | 2 cut(s) | 108, 508 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 618 |
| BspACI | CCGC | 2 cut(s) | 32, 243 |
| BspANI | GGCC | 4 cut(s) | 138, 469, 519, 537 |
| BspCNI | CTCAG | 1 cut(s) | 610 |
| BspDI | ATCGAT | 1 cut(s) | 255 |
| BspLI | GGNNCC | 1 cut(s) | 36 |
| BspMAI | CTGCAG | 1 cut(s) | 684 |
| BspPI | GGATC | 1 cut(s) | 516 |
| BspTNI | GGTCTC | 1 cut(s) | 688 |
| BsrFI | RCCGGY | 2 cut(s) | 211, 298 |
| BsrGI | TGTACA | 1 cut(s) | 780 |
| BsrI | ACTGG | 1 cut(s) | 92 |
| BssAI | RCCGGY | 2 cut(s) | 211, 298 |
| BssECI | CCNNGG | 2 cut(s) | 189, 356 |
| BssMI | GATC | 2 cut(s) | 108, 508 |
| BssNAI | GTATAC | 1 cut(s) | 851 |
| Bst1107I | GTATAC | 1 cut(s) | 851 |
| Bst2UI | CCWGG | 1 cut(s) | 314 |
| Bst4CI | ACNGT | 1 cut(s) | 494 |
| Bst6I | CTCTTC | 1 cut(s) | 244 |
| BstAUI | TGTACA | 1 cut(s) | 780 |
| BstC8I | GCNNGC | 4 cut(s) | 213, 349, 353, 375 |
| BstDEI | CTNAG | 2 cut(s) | 618, 827 |
| BstF5I | GGATG | 2 cut(s) | 142, 322 |
| BstKTI | GATC | 2 cut(s) | 111, 511 |
| BstMAI | GTCTC | 3 cut(s) | 57, 314, 688 |
| BstMBI | GATC | 2 cut(s) | 108, 508 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 383, 466 |
| BstNI | CCWGG | 1 cut(s) | 314 |
| BstNSI | RCATGY | 2 cut(s) | 503, 724 |
| BstSCI | CCNGG | 3 cut(s) | 312, 355, 356 |
| BstSFI | CTRYAG | 1 cut(s) | 680 |
| BstSLI | GKGCMC | 2 cut(s) | 50, 605 |
| BstV2I | GAAGAC | 2 cut(s) | 159, 168 |
| BstX2I | RGATCY | 2 cut(s) | 108, 508 |
| BstYI | RGATCY | 2 cut(s) | 108, 508 |
| BstZ17I | GTATAC | 1 cut(s) | 851 |
| Bsu15I | ATCGAT | 1 cut(s) | 255 |
| BsuRI | GGCC | 4 cut(s) | 138, 469, 519, 537 |
| BsuTUI | ATCGAT | 1 cut(s) | 255 |
| BtrI | CACGTC | 2 cut(s) | 51, 691 |
| BtsCI | GGATG | 2 cut(s) | 142, 322 |
| BtsI | GCAGTG | 3 cut(s) | 659, 677, 783 |
| BtsIMutI | CAGTG | 3 cut(s) | 659, 677, 783 |
| Cac8I | GCNNGC | 4 cut(s) | 213, 349, 353, 375 |
| Cfr10I | RCCGGY | 2 cut(s) | 211, 298 |
| Cfr13I | GGNCC | 1 cut(s) | 535 |
| Cfr9I | CCCGGG | 1 cut(s) | 356 |
| ClaI | ATCGAT | 1 cut(s) | 255 |
| CseI | GACGC | 2 cut(s) | 331, 379 |
| Csp6I | GTAC | 3 cut(s) | 183, 781, 810 |
| CspAI | ACCGGT | 1 cut(s) | 298 |
| CviAII | CATG | 3 cut(s) | 500, 629, 721 |
| CviQI | GTAC | 3 cut(s) | 183, 781, 810 |
| DdeI | CTNAG | 2 cut(s) | 618, 827 |
| DpnI | GATC | 2 cut(s) | 110, 510 |
| DpnII | GATC | 2 cut(s) | 108, 508 |
| EaeI | YGGCCR | 1 cut(s) | 136 |
| Eam1104I | CTCTTC | 1 cut(s) | 244 |
| EarI | CTCTTC | 1 cut(s) | 244 |
| EciI | GGCGGA | 2 cut(s) | 47, 232 |
| Ecl136II | GAGCTC | 1 cut(s) | 131 |
| Eco24I | GRGCYC | 1 cut(s) | 133 |
| Eco31I | GGTCTC | 1 cut(s) | 688 |
| Eco53kI | GAGCTC | 1 cut(s) | 131 |
| Eco88I | CYCGRG | 3 cut(s) | 188, 227, 356 |
| EcoICRI | GAGCTC | 1 cut(s) | 131 |
| EcoRI | GAATTC | 1 cut(s) | 594 |
| EcoRII | CCWGG | 1 cut(s) | 312 |
| EcoT38I | GRGCYC | 1 cut(s) | 133 |
| Esp3I | CGTCTC | 2 cut(s) | 57, 314 |
| FaeI | CATG | 3 cut(s) | 503, 632, 724 |
| FatI | CATG | 3 cut(s) | 499, 628, 720 |
| FauNDI | CATATG | 1 cut(s) | 337 |
| FblI | GTMKAC | 1 cut(s) | 850 |
| FokI | GGATG | 2 cut(s) | 129, 329 |
| FriOI | GRGCYC | 1 cut(s) | 133 |
| FspBI | CTAG | 4 cut(s) | 326, 411, 759, 819 |
| HaeIII | GGCC | 4 cut(s) | 138, 469, 519, 537 |
| HapII | CCGG | 3 cut(s) | 212, 299, 357 |
| HgaI | GACGC | 2 cut(s) | 331, 379 |
| Hin1II | CATG | 3 cut(s) | 503, 632, 724 |
| HincII | GTYRAC | 1 cut(s) | 553 |
| HindII | GTYRAC | 1 cut(s) | 553 |
| HinfI | GANTC | 6 cut(s) | 96, 236, 266, 272, 341, 747 |
| HpaII | CCGG | 3 cut(s) | 212, 299, 357 |
| Hpy166II | GTNNAC | 5 cut(s) | 553, 603, 783, 810, 851 |
| Hpy188I | TCNGA | 5 cut(s) | 128, 265, 271, 277, 369 |
| Hpy188III | TCNNGA | 4 cut(s) | 65, 106, 188, 308 |
| Hpy8I | GTNNAC | 5 cut(s) | 553, 603, 783, 810, 851 |
| HpyAV | CCTTC | 4 cut(s) | 67, 208, 480, 762 |
| HpyCH4III | ACNGT | 1 cut(s) | 494 |
| HpyCH4IV | ACGT | 4 cut(s) | 40, 50, 435, 690 |
| HpyCH4V | TGCA | 6 cut(s) | 335, 580, 603, 682, 788, 836 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 383, 466 |
| HpyF3I | CTNAG | 2 cut(s) | 618, 827 |
| HpySE526I | ACGT | 4 cut(s) | 40, 50, 435, 690 |
| Hsp92II | CATG | 3 cut(s) | 503, 632, 724 |
| KroI | GCCGGC | 1 cut(s) | 211 |
| KroNI | GCCGGC | 1 cut(s) | 213 |
| Kzo9I | GATC | 2 cut(s) | 108, 508 |
| LmnI | GCTCC | 1 cut(s) | 34 |
| LweI | GCATC | 1 cut(s) | 845 |
| MaeI | CTAG | 4 cut(s) | 326, 411, 759, 819 |
| MaeII | ACGT | 4 cut(s) | 40, 50, 435, 690 |
| MaeIII | GTNAC | 1 cut(s) | 147 |
| MalI | GATC | 2 cut(s) | 110, 510 |
| MboI | GATC | 2 cut(s) | 108, 508 |
| MboII | GAAGA | 9 cut(s) | 91, 94, 103, 147, 159, 168, 231, 644, 647 |
| MflI | RGATCY | 2 cut(s) | 108, 508 |
| MhlI | GDGCHC | 4 cut(s) | 50, 133, 234, 605 |
| MluCI | AATT | 3 cut(s) | 540, 594, 790 |
| MlyI | GAGTC | 3 cut(s) | 230, 266, 350 |
| MmeI | TCCRAC | 1 cut(s) | 300 |
| MnlI | CCTC | 4 cut(s) | 184, 294, 705, 815 |
| MroNI | GCCGGC | 1 cut(s) | 211 |
| MroXI | GAANNNNTTC | 3 cut(s) | 446, 732, 751 |
| MseI | TTAA | 1 cut(s) | 20 |
| MspI | CCGG | 3 cut(s) | 212, 299, 357 |
| MspR9I | CCNGG | 3 cut(s) | 314, 357, 358 |
| MvaI | CCWGG | 1 cut(s) | 314 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 383, 466 |
| NaeI | GCCGGC | 1 cut(s) | 213 |
| NciI | CCSGG | 2 cut(s) | 357, 358 |
| NdeI | CATATG | 1 cut(s) | 337 |
| NdeII | GATC | 2 cut(s) | 108, 508 |
| NgoMIV | GCCGGC | 1 cut(s) | 211 |
| NlaIII | CATG | 3 cut(s) | 503, 632, 724 |
| NlaIV | GGNNCC | 1 cut(s) | 36 |
| NmeAIII | GCCGAG | 1 cut(s) | 114 |
| NspI | RCATGY | 2 cut(s) | 503, 724 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 170, 225, 261 |
| PdiI | GCCGGC | 1 cut(s) | 213 |
| PdmI | GAANNNNTTC | 3 cut(s) | 446, 732, 751 |
| PfeI | GAWTC | 3 cut(s) | 96, 266, 747 |
| PinAI | ACCGGT | 1 cut(s) | 298 |
| PleI | GAGTC | 3 cut(s) | 230, 266, 349 |
| PpsI | GAGTC | 3 cut(s) | 230, 266, 349 |
| Psp124BI | GAGCTC | 1 cut(s) | 133 |
| Psp6I | CCWGG | 1 cut(s) | 312 |
| PspGI | CCWGG | 1 cut(s) | 312 |
| PspN4I | GGNNCC | 1 cut(s) | 36 |
| PspPI | GGNCC | 1 cut(s) | 535 |
| PstI | CTGCAG | 1 cut(s) | 684 |
| PsuI | RGATCY | 2 cut(s) | 108, 508 |
| RsaI | GTAC | 3 cut(s) | 184, 782, 811 |
| RsaNI | GTAC | 3 cut(s) | 183, 781, 810 |
| SacI | GAGCTC | 1 cut(s) | 133 |
| SaqAI | TTAA | 1 cut(s) | 20 |
| Sau3AI | GATC | 2 cut(s) | 108, 508 |
| Sau96I | GGNCC | 1 cut(s) | 535 |
| SchI | GAGTC | 3 cut(s) | 230, 266, 350 |
| ScrFI | CCNGG | 3 cut(s) | 314, 357, 358 |
| SduI | GDGCHC | 4 cut(s) | 50, 133, 234, 605 |
| SfaNI | GCATC | 1 cut(s) | 845 |
| SfcI | CTRYAG | 1 cut(s) | 680 |
| SmaI | CCCGGG | 1 cut(s) | 358 |
| SmlI | CTYRAG | 2 cut(s) | 63, 665 |
| SmoI | CTYRAG | 2 cut(s) | 63, 665 |
| Sse9I | AATT | 3 cut(s) | 540, 594, 790 |
| SsiI | CCGC | 2 cut(s) | 32, 243 |
| SspMI | CTAG | 4 cut(s) | 326, 411, 759, 819 |
| SstI | GAGCTC | 1 cut(s) | 133 |
| StyD4I | CCNGG | 3 cut(s) | 312, 355, 356 |
| TaaI | ACNGT | 1 cut(s) | 494 |
| TaiI | ACGT | 4 cut(s) | 43, 53, 438, 693 |
| TaqI | TCGA | 2 cut(s) | 219, 255 |
| TasI | AATT | 3 cut(s) | 540, 594, 790 |
| TatI | WGTACW | 3 cut(s) | 182, 780, 809 |
| TfiI | GAWTC | 3 cut(s) | 96, 266, 747 |
| Tru1I | TTAA | 1 cut(s) | 20 |
| Tru9I | TTAA | 1 cut(s) | 20 |
| TscAI | CASTG | 3 cut(s) | 666, 684, 790 |
| TspDTI | ATGAA | 2 cut(s) | 103, 159 |
| TspGWI | ACGGA | 4 cut(s) | 135, 500, 588, 868 |
| TspMI | CCCGGG | 1 cut(s) | 356 |
| TspRI | CASTG | 3 cut(s) | 666, 684, 790 |
| VneI | GTGCAC | 1 cut(s) | 601 |
| XapI | RAATTY | 2 cut(s) | 594, 790 |
| XceI | RCATGY | 2 cut(s) | 503, 724 |
| XmaI | CCCGGG | 1 cut(s) | 356 |
| XmiI | GTMKAC | 1 cut(s) | 850 |
| XmnI | GAANNNNTTC | 3 cut(s) | 446, 732, 751 |
| XspI | CTAG | 4 cut(s) | 326, 411, 759, 819 |