WRKY Transcription Factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 3 - 162 | 2.2e-21 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 431 |
| AccB1I | GGYRCC | 1 cut(s) | 880 |
| AccI | GTMKAC | 1 cut(s) | 788 |
| AccIII | TCCGGA | 1 cut(s) | 730 |
| AciI | CCGC | 3 cut(s) | 459, 511, 693 |
| AcsI | RAATTY | 2 cut(s) | 603, 886 |
| AcuI | CTGAAG | 1 cut(s) | 348 |
| AfaI | GTAC | 3 cut(s) | 154, 184, 211 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 398, 399 |
| AflIII | ACRYGT | 2 cut(s) | 273, 315 |
| AgsI | TTSAA | 4 cut(s) | 37, 190, 412, 707 |
| AjnI | CCWGG | 2 cut(s) | 135, 279 |
| AluBI | AGCT | 4 cut(s) | 73, 340, 456, 972 |
| AluI | AGCT | 4 cut(s) | 73, 340, 456, 972 |
| Alw21I | GWGCWC | 2 cut(s) | 721, 798 |
| Alw26I | GTCTC | 5 cut(s) | 9, 536, 647, 807, 835 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 456 |
| Aor13HI | TCCGGA | 1 cut(s) | 730 |
| AoxI | GGCC | 1 cut(s) | 959 |
| ApeKI | GCWGC | 7 cut(s) | 70, 170, 456, 514, 861, 969, 972 |
| ApoI | RAATTY | 2 cut(s) | 603, 886 |
| AspLEI | GCGC | 1 cut(s) | 122 |
| AspS9I | GGNCC | 4 cut(s) | 562, 635, 733, 959 |
| AsuC2I | CCSGG | 1 cut(s) | 12 |
| AsuHPI | GGTGA | 2 cut(s) | 814, 1001 |
| AvaII | GGWCC | 3 cut(s) | 562, 635, 733 |
| BanI | GGYRCC | 1 cut(s) | 880 |
| Bbv12I | GWGCWC | 2 cut(s) | 721, 798 |
| BbvI | GCAGC | 7 cut(s) | 82, 157, 443, 526, 873, 959, 981 |
| BccI | CCATC | 2 cut(s) | 48, 833 |
| BciT130I | CCWGG | 2 cut(s) | 137, 281 |
| BcnI | CCSGG | 1 cut(s) | 12 |
| BcoDI | GTCTC | 5 cut(s) | 9, 536, 647, 807, 835 |
| BfmI | CTRYAG | 1 cut(s) | 546 |
| BisI | GCNGC | 8 cut(s) | 71, 171, 457, 512, 515, 862, 970, 973 |
| BlsI | GCNGC | 8 cut(s) | 72, 172, 458, 513, 516, 863, 971, 974 |
| Bme1390I | CCNGG | 3 cut(s) | 12, 137, 281 |
| Bme18I | GGWCC | 3 cut(s) | 562, 635, 733 |
| BmgT120I | GGNCC | 4 cut(s) | 562, 635, 733, 959 |
| BmiI | GGNNCC | 2 cut(s) | 564, 882 |
| BmrFI | CCNGG | 3 cut(s) | 12, 137, 281 |
| BmsI | GCATC | 1 cut(s) | 456 |
| BpuMI | CCSGG | 1 cut(s) | 12 |
| BsaJI | CCNNGG | 3 cut(s) | 11, 136, 280 |
| BsaWI | WCCGGW | 1 cut(s) | 730 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 605, 635, 761, 791, 804, 834 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 398, 399 |
| Bse1I | ACTGG | 2 cut(s) | 736, 986 |
| BseAI | TCCGGA | 1 cut(s) | 730 |
| BseBI | CCWGG | 2 cut(s) | 137, 281 |
| BseDI | CCNNGG | 3 cut(s) | 11, 136, 280 |
| BseGI | GGATG | 1 cut(s) | 349 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 398, 399 |
| BseMII | CTCAG | 4 cut(s) | 348, 701, 783, 813 |
| BseNI | ACTGG | 2 cut(s) | 736, 986 |
| BseRI | GAGGAG | 1 cut(s) | 1043 |
| BseXI | GCAGC | 7 cut(s) | 82, 157, 443, 526, 873, 959, 981 |
| BseYI | CCCAGC | 1 cut(s) | 985 |
| BsgI | GTGCAG | 1 cut(s) | 89 |
| BshFI | GGCC | 1 cut(s) | 961 |
| BshNI | GGYRCC | 1 cut(s) | 880 |
| BsiHKAI | GWGCWC | 2 cut(s) | 721, 798 |
| BsiSI | CCGG | 2 cut(s) | 11, 731 |
| BslFI | GGGAC | 1 cut(s) | 941 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 398, 399 |
| BsmAI | GTCTC | 5 cut(s) | 9, 536, 647, 807, 835 |
| BsmBI | CGTCTC | 1 cut(s) | 647 |
| BsmFI | GGGAC | 1 cut(s) | 941 |
| BsnI | GGCC | 1 cut(s) | 961 |
| Bsp1286I | GDGCHC | 2 cut(s) | 721, 798 |
| Bsp13I | TCCGGA | 1 cut(s) | 730 |
| Bsp143I | GATC | 1 cut(s) | 268 |
| BspACI | CCGC | 3 cut(s) | 459, 511, 693 |
| BspANI | GGCC | 1 cut(s) | 961 |
| BspCNI | CTCAG | 4 cut(s) | 349, 700, 784, 812 |
| BspEI | TCCGGA | 1 cut(s) | 730 |
| BspLI | GGNNCC | 2 cut(s) | 564, 882 |
| BspMAI | CTGCAG | 1 cut(s) | 550 |
| BspT107I | GGYRCC | 1 cut(s) | 880 |
| BsrI | ACTGG | 2 cut(s) | 736, 986 |
| BssECI | CCNNGG | 3 cut(s) | 11, 136, 280 |
| BssMI | GATC | 1 cut(s) | 268 |
| Bst2UI | CCWGG | 2 cut(s) | 137, 281 |
| Bst4CI | ACNGT | 3 cut(s) | 95, 536, 869 |
| Bst6I | CTCTTC | 3 cut(s) | 12, 903, 940 |
| BstC8I | GCNNGC | 2 cut(s) | 693, 1040 |
| BstDEI | CTNAG | 4 cut(s) | 357, 687, 792, 799 |
| BstF5I | GGATG | 1 cut(s) | 349 |
| BstHHI | GCGC | 1 cut(s) | 122 |
| BstKTI | GATC | 1 cut(s) | 271 |
| BstMAI | GTCTC | 5 cut(s) | 9, 536, 647, 807, 835 |
| BstMBI | GATC | 1 cut(s) | 268 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 119, 453 |
| BstNI | CCWGG | 2 cut(s) | 137, 281 |
| BstNSI | RCATGY | 2 cut(s) | 277, 511 |
| BstSCI | CCNGG | 3 cut(s) | 10, 135, 279 |
| BstSFI | CTRYAG | 1 cut(s) | 546 |
| BstV1I | GCAGC | 7 cut(s) | 82, 157, 443, 526, 873, 959, 981 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 84 |
| BsuRI | GGCC | 1 cut(s) | 961 |
| BtsCI | GGATG | 1 cut(s) | 349 |
| BtsIMutI | CAGTG | 3 cut(s) | 66, 354, 874 |
| Cac8I | GCNNGC | 2 cut(s) | 693, 1040 |
| CaiI | CAGNNNCTG | 1 cut(s) | 456 |
| CfoI | GCGC | 1 cut(s) | 122 |
| Cfr13I | GGNCC | 4 cut(s) | 562, 635, 733, 959 |
| Csp6I | GTAC | 3 cut(s) | 153, 183, 210 |
| CviAII | CATG | 7 cut(s) | 274, 508, 527, 650, 682, 701, 1043 |
| CviQI | GTAC | 3 cut(s) | 153, 183, 210 |
| DdeI | CTNAG | 4 cut(s) | 357, 687, 792, 799 |
| DpnI | GATC | 1 cut(s) | 270 |
| DpnII | GATC | 1 cut(s) | 268 |
| Eam1104I | CTCTTC | 3 cut(s) | 12, 903, 940 |
| EarI | CTCTTC | 3 cut(s) | 12, 903, 940 |
| Eco32I | GATATC | 1 cut(s) | 849 |
| Eco47I | GGWCC | 3 cut(s) | 562, 635, 733 |
| Eco57I | CTGAAG | 1 cut(s) | 348 |
| EcoRII | CCWGG | 2 cut(s) | 135, 279 |
| EcoRV | GATATC | 1 cut(s) | 849 |
| Esp3I | CGTCTC | 1 cut(s) | 647 |
| FaeI | CATG | 7 cut(s) | 277, 511, 530, 653, 685, 704, 1046 |
| FaqI | GGGAC | 1 cut(s) | 941 |
| FatI | CATG | 7 cut(s) | 273, 507, 526, 649, 681, 700, 1042 |
| FauI | CCCGC | 1 cut(s) | 700 |
| FauNDI | CATATG | 1 cut(s) | 568 |
| FblI | GTMKAC | 1 cut(s) | 788 |
| Fnu4HI | GCNGC | 8 cut(s) | 71, 171, 457, 512, 515, 862, 970, 973 |
| FokI | GGATG | 1 cut(s) | 356 |
| Fsp4HI | GCNGC | 8 cut(s) | 71, 171, 457, 512, 515, 862, 970, 973 |
| GlaI | GCGC | 1 cut(s) | 121 |
| GluI | GCNGC | 8 cut(s) | 71, 171, 457, 512, 515, 862, 970, 973 |
| GsaI | CCCAGC | 1 cut(s) | 989 |
| HaeIII | GGCC | 1 cut(s) | 961 |
| HapII | CCGG | 2 cut(s) | 11, 731 |
| HhaI | GCGC | 1 cut(s) | 122 |
| Hin1II | CATG | 7 cut(s) | 277, 511, 530, 653, 685, 704, 1046 |
| Hin6I | GCGC | 1 cut(s) | 120 |
| HinP1I | GCGC | 1 cut(s) | 120 |
| HpaII | CCGG | 2 cut(s) | 11, 731 |
| HphI | GGTGA | 2 cut(s) | 814, 1001 |
| Hpy166II | GTNNAC | 3 cut(s) | 210, 532, 789 |
| Hpy188III | TCNNGA | 4 cut(s) | 26, 322, 485, 731 |
| Hpy8I | GTNNAC | 3 cut(s) | 210, 532, 789 |
| HpyAV | CCTTC | 4 cut(s) | 196, 326, 701, 803 |
| HpyCH4III | ACNGT | 3 cut(s) | 95, 536, 869 |
| HpyCH4IV | ACGT | 1 cut(s) | 317 |
| HpyCH4V | TGCA | 6 cut(s) | 70, 216, 447, 548, 969, 1042 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 119, 453 |
| HpyF3I | CTNAG | 4 cut(s) | 357, 687, 792, 799 |
| HpySE526I | ACGT | 1 cut(s) | 317 |
| Hsp92II | CATG | 7 cut(s) | 277, 511, 530, 653, 685, 704, 1046 |
| HspAI | GCGC | 1 cut(s) | 120 |
| Kpn2I | TCCGGA | 1 cut(s) | 730 |
| Kzo9I | GATC | 1 cut(s) | 268 |
| LmnI | GCTCC | 1 cut(s) | 716 |
| Lsp1109I | GCAGC | 7 cut(s) | 82, 157, 443, 526, 873, 959, 981 |
| LweI | GCATC | 1 cut(s) | 456 |
| MaeII | ACGT | 1 cut(s) | 317 |
| MaeIII | GTNAC | 3 cut(s) | 361, 629, 820 |
| MalI | GATC | 1 cut(s) | 270 |
| MboI | GATC | 1 cut(s) | 268 |
| MboII | GAAGA | 3 cut(s) | 341, 920, 957 |
| MhlI | GDGCHC | 2 cut(s) | 721, 798 |
| MluCI | AATT | 8 cut(s) | 82, 141, 426, 572, 603, 696, 886, 917 |
| MlyI | GAGTC | 9 cut(s) | 299, 629, 679, 705, 785, 794, 828, 837, 941 |
| MmeI | TCCRAC | 1 cut(s) | 720 |
| MnlI | CCTC | 7 cut(s) | 352, 603, 648, 763, 892, 941, 1021 |
| MroI | TCCGGA | 1 cut(s) | 730 |
| MseI | TTAA | 3 cut(s) | 129, 380, 419 |
| MspA1I | CMGCKG | 1 cut(s) | 972 |
| MspI | CCGG | 2 cut(s) | 11, 731 |
| MspR9I | CCNGG | 3 cut(s) | 12, 137, 281 |
| MvaI | CCWGG | 2 cut(s) | 137, 281 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 119, 453 |
| NciI | CCSGG | 1 cut(s) | 12 |
| NdeI | CATATG | 1 cut(s) | 568 |
| NdeII | GATC | 1 cut(s) | 268 |
| NlaIII | CATG | 7 cut(s) | 277, 511, 530, 653, 685, 704, 1046 |
| NlaIV | GGNNCC | 2 cut(s) | 564, 882 |
| NmuCI | GTSAC | 2 cut(s) | 361, 820 |
| NspI | RCATGY | 2 cut(s) | 277, 511 |
| PciI | ACATGT | 1 cut(s) | 273 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 233 |
| PfeI | GAWTC | 4 cut(s) | 224, 233, 246, 499 |
| PflFI | GACNNNGTC | 2 cut(s) | 639, 818 |
| PkrI | GCNGC | 8 cut(s) | 72, 172, 458, 513, 516, 863, 971, 974 |
| PleI | GAGTC | 9 cut(s) | 299, 628, 679, 705, 784, 793, 827, 836, 940 |
| PpsI | GAGTC | 9 cut(s) | 299, 628, 679, 705, 784, 793, 827, 836, 940 |
| PscI | ACATGT | 1 cut(s) | 273 |
| PsiI | TTATAA | 1 cut(s) | 431 |
| Psp6I | CCWGG | 2 cut(s) | 135, 279 |
| PspFI | CCCAGC | 1 cut(s) | 985 |
| PspGI | CCWGG | 2 cut(s) | 135, 279 |
| PspN4I | GGNNCC | 2 cut(s) | 564, 882 |
| PspPI | GGNCC | 4 cut(s) | 562, 635, 733, 959 |
| PstI | CTGCAG | 1 cut(s) | 550 |
| PstNI | CAGNNNCTG | 1 cut(s) | 456 |
| PsyI | GACNNNGTC | 2 cut(s) | 639, 818 |
| PvuII | CAGCTG | 1 cut(s) | 972 |
| RsaI | GTAC | 3 cut(s) | 154, 184, 211 |
| RsaNI | GTAC | 3 cut(s) | 153, 183, 210 |
| SaqAI | TTAA | 3 cut(s) | 129, 380, 419 |
| SatI | GCNGC | 8 cut(s) | 71, 171, 457, 512, 515, 862, 970, 973 |
| Sau3AI | GATC | 1 cut(s) | 268 |
| Sau96I | GGNCC | 4 cut(s) | 562, 635, 733, 959 |
| SchI | GAGTC | 9 cut(s) | 299, 629, 679, 705, 785, 794, 828, 837, 941 |
| ScrFI | CCNGG | 3 cut(s) | 12, 137, 281 |
| SduI | GDGCHC | 2 cut(s) | 721, 798 |
| SetI | ASST | 9 cut(s) | 75, 188, 266, 320, 342, 363, 458, 640, 974 |
| SfaNI | GCATC | 1 cut(s) | 456 |
| SfcI | CTRYAG | 1 cut(s) | 546 |
| SinI | GGWCC | 3 cut(s) | 562, 635, 733 |
| Sse9I | AATT | 8 cut(s) | 82, 141, 426, 572, 603, 696, 886, 917 |
| SsiI | CCGC | 3 cut(s) | 459, 511, 693 |
| StyD4I | CCNGG | 3 cut(s) | 10, 135, 279 |
| TaaI | ACNGT | 3 cut(s) | 95, 536, 869 |
| TaiI | ACGT | 1 cut(s) | 320 |
| TaqI | TCGA | 1 cut(s) | 231 |
| TasI | AATT | 8 cut(s) | 82, 141, 426, 572, 603, 696, 886, 917 |
| TatI | WGTACW | 1 cut(s) | 209 |
| TauI | GCSGC | 1 cut(s) | 514 |
| TfiI | GAWTC | 4 cut(s) | 224, 233, 246, 499 |
| Tru1I | TTAA | 3 cut(s) | 129, 380, 419 |
| Tru9I | TTAA | 3 cut(s) | 129, 380, 419 |
| TscAI | CASTG | 3 cut(s) | 66, 361, 874 |
| TseFI | GTSAC | 2 cut(s) | 361, 820 |
| TseI | GCWGC | 7 cut(s) | 70, 170, 456, 514, 861, 969, 972 |
| Tsp45I | GTSAC | 2 cut(s) | 361, 820 |
| TspDTI | ATGAA | 9 cut(s) | 360, 504, 512, 515, 585, 638, 689, 690, 1059 |
| TspGWI | ACGGA | 2 cut(s) | 398, 648 |
| TspRI | CASTG | 3 cut(s) | 66, 361, 874 |
| Tth111I | GACNNNGTC | 2 cut(s) | 639, 818 |
| VpaK11BI | GGWCC | 3 cut(s) | 562, 635, 733 |
| XapI | RAATTY | 2 cut(s) | 603, 886 |
| XceI | RCATGY | 2 cut(s) | 277, 511 |
| XmiI | GTMKAC | 1 cut(s) | 788 |