TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 4 - 168 | 1e-14 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 239 - 307 | 3.1e-22 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 471 - 604 | 3e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 576 - 660 | 1.5e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 604 - 675 | 2.2e-09 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 641 - 703 | 1e-07 | Leucine-rich repeat region |
| C-JID | PF20160 | 854 - 1012 | 1.6e-16 | C-JID domain |
| WRKY | PF03106 | 1110 - 1169 | 2.7e-06 | WRKY DNA -binding domain |
| WRKY | PF03106 | 1195 - 1252 | 3e-17 | WRKY DNA -binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 4070 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3839 |
| Acc16I | TGCGCA | 1 cut(s) | 2388 |
| AccB1I | GGYRCC | 1 cut(s) | 1435 |
| AccBSI | CCGCTC | 1 cut(s) | 1165 |
| AccII | CGCG | 3 cut(s) | 2678, 2811, 3806 |
| AciI | CCGC | 7 cut(s) | 39, 1165, 2678, 2809, 3399, 3804, 3806 |
| AclI | AACGTT | 1 cut(s) | 367 |
| AclWI | GGATC | 1 cut(s) | 455 |
| AcoI | YGGCCR | 3 cut(s) | 1157, 2135, 3807 |
| AcuI | CTGAAG | 5 cut(s) | 481, 1430, 2219, 2291, 3591 |
| AcvI | CACGTG | 1 cut(s) | 676 |
| AcyI | GRCGYC | 1 cut(s) | 1436 |
| AdeI | CACNNNGTG | 2 cut(s) | 676, 685 |
| AfeI | AGCGCT | 1 cut(s) | 3704 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 108, 331, 2527, 2528, 3377, 3429, 3584, 4112, 4113 |
| AflII | CTTAAG | 2 cut(s) | 1409, 1550 |
| AflIII | ACRYGT | 3 cut(s) | 1042, 2832, 3752 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3573 |
| AjiI | CACGTC | 1 cut(s) | 542 |
| AjnI | CCWGG | 7 cut(s) | 107, 584, 2563, 2694, 3324, 3622, 3859 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 357, 389, 617, 649, 4204, 4236 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2560, 2592 |
| Alw21I | GWGCWC | 5 cut(s) | 595, 681, 847, 876, 1970 |
| Alw26I | GTCTC | 3 cut(s) | 2332, 2433, 3560 |
| Alw44I | GTGCAC | 1 cut(s) | 677 |
| AlwI | GGATC | 1 cut(s) | 455 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1926 |
| Ama87I | CYCGRG | 3 cut(s) | 875, 1634, 1775 |
| Aor51HI | AGCGCT | 1 cut(s) | 3704 |
| AoxI | GGCC | 7 cut(s) | 1157, 1513, 2058, 2135, 2907, 3432, 3807 |
| ApaLI | GTGCAC | 1 cut(s) | 677 |
| ApeKI | GCWGC | 8 cut(s) | 41, 1364, 1611, 1752, 2285, 3117, 3678, 4057 |
| AseI | ATTAAT | 1 cut(s) | 2871 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 494, 786, 963, 1719, 1860, 2316, 3723 |
| AspLEI | GCGC | 4 cut(s) | 1438, 2389, 2678, 3705 |
| AspS9I | GGNCC | 5 cut(s) | 1216, 3322, 3432, 3575, 4208 |
| AsuC2I | CCSGG | 2 cut(s) | 2057, 3423 |
| AsuHPI | GGTGA | 8 cut(s) | 137, 662, 881, 3098, 3610, 3840, 3849, 4005 |
| AvaI | CYCGRG | 3 cut(s) | 875, 1634, 1775 |
| AvaII | GGWCC | 4 cut(s) | 1216, 3322, 3575, 4208 |
| AxyI | CCTNAGG | 1 cut(s) | 2526 |
| BaeGI | GKGCMC | 2 cut(s) | 681, 1801 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 4083, 4116 |
| BalI | TGGCCA | 1 cut(s) | 2137 |
| BanI | GGYRCC | 1 cut(s) | 1435 |
| BanII | GRGCYC | 4 cut(s) | 595, 847, 876, 4201 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 2593, 2625, 2943, 2975 |
| BbrPI | CACGTG | 1 cut(s) | 676 |
| BbsI | GAAGAC | 5 cut(s) | 1550, 1904, 2601, 2958, 4133 |
| Bbv12I | GWGCWC | 5 cut(s) | 595, 681, 847, 876, 1970 |
| BbvI | GCAGC | 8 cut(s) | 28, 1351, 1598, 1739, 2297, 3104, 3665, 4069 |
| BceAI | ACGGC | 5 cut(s) | 1267, 1733, 1765, 1874, 2330 |
| BciT130I | CCWGG | 7 cut(s) | 109, 586, 2565, 2696, 3326, 3624, 3861 |
| BciVI | GTATCC | 3 cut(s) | 331, 964, 2029 |
| BclI | TGATCA | 1 cut(s) | 142 |
| BcnI | CCSGG | 2 cut(s) | 2057, 3423 |
| BcoDI | GTCTC | 3 cut(s) | 2332, 2433, 3560 |
| BfaI | CTAG | 7 cut(s) | 302, 405, 422, 662, 710, 737, 3761 |
| BfmI | CTRYAG | 2 cut(s) | 893, 2283 |
| BfoI | RGCGCY | 2 cut(s) | 1439, 3706 |
| BfrI | CTTAAG | 2 cut(s) | 1409, 1550 |
| BfuI | GTATCC | 3 cut(s) | 331, 964, 2029 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3114 |
| BisI | GCNGC | 9 cut(s) | 42, 1365, 1612, 1753, 2286, 3118, 3679, 3807, 4058 |
| BlpI | GCTNAGC | 1 cut(s) | 3121 |
| BlsI | GCNGC | 9 cut(s) | 43, 1366, 1613, 1754, 2287, 3119, 3680, 3808, 4059 |
| BmcAI | AGTACT | 1 cut(s) | 420 |
| Bme1390I | CCNGG | 9 cut(s) | 109, 586, 2057, 2565, 2696, 3326, 3423, 3624, 3861 |
| Bme18I | GGWCC | 4 cut(s) | 1216, 3322, 3575, 4208 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3573 |
| BmeT110I | CYCGRG | 3 cut(s) | 875, 1634, 1775 |
| BmgBI | CACGTC | 1 cut(s) | 542 |
| BmgT120I | GGNCC | 5 cut(s) | 1216, 3322, 3432, 3575, 4208 |
| BmiI | GGNNCC | 7 cut(s) | 1217, 1437, 3072, 3107, 3323, 3865, 3963 |
| BmrFI | CCNGG | 9 cut(s) | 109, 586, 2057, 2565, 2696, 3326, 3423, 3624, 3861 |
| BmrI | ACTGGG | 1 cut(s) | 2309 |
| BmuI | ACTGGG | 1 cut(s) | 2309 |
| BoxI | GACNNNNGTC | 2 cut(s) | 609, 1323 |
| BpiI | GAAGAC | 5 cut(s) | 1550, 1904, 2601, 2958, 4133 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 3104, 3136, 3253, 3285 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1670 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3121 |
| BpuEI | CTTGAG | 9 cut(s) | 520, 844, 1038, 1546, 1574, 1643, 1784, 3131, 4011 |
| BpuMI | CCSGG | 2 cut(s) | 2057, 3423 |
| Bsa29I | ATCGAT | 1 cut(s) | 2144 |
| BsaAI | YACGTR | 2 cut(s) | 676, 1043 |
| BsaBI | GATNNNNATC | 2 cut(s) | 9, 1382 |
| BsaHI | GRCGYC | 1 cut(s) | 1436 |
| BsaJI | CCNNGG | 9 cut(s) | 108, 330, 585, 929, 1359, 2694, 2695, 2852, 3804 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 108, 331, 2527, 2528, 3377, 3429, 3584, 4112, 4113 |
| Bse1I | ACTGG | 5 cut(s) | 2044, 2304, 2819, 3347, 4001 |
| Bse21I | CCTNAGG | 1 cut(s) | 2526 |
| Bse3DI | GCAATG | 4 cut(s) | 102, 2217, 2752, 3781 |
| Bse8I | GATNNNNATC | 2 cut(s) | 9, 1382 |
| BseBI | CCWGG | 7 cut(s) | 109, 586, 2565, 2696, 3326, 3624, 3861 |
| BseCI | ATCGAT | 1 cut(s) | 2144 |
| BseDI | CCNNGG | 9 cut(s) | 108, 330, 585, 929, 1359, 2694, 2695, 2852, 3804 |
| BseGI | GGATG | 8 cut(s) | 1493, 1703, 1844, 2218, 2589, 3046, 3334, 4122 |
| BseJI | GATNNNNATC | 2 cut(s) | 9, 1382 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 108, 331, 2527, 2528, 3377, 3429, 3584, 4112, 4113 |
| BseMI | GCAATG | 4 cut(s) | 102, 2217, 2752, 3781 |
| BseNI | ACTGG | 5 cut(s) | 2044, 2304, 2819, 3347, 4001 |
| BseRI | GAGGAG | 4 cut(s) | 2514, 3182, 3185, 3651 |
| BseSI | GKGCMC | 2 cut(s) | 681, 1801 |
| BseXI | GCAGC | 8 cut(s) | 28, 1351, 1598, 1739, 2297, 3104, 3665, 4069 |
| BseYI | CCCAGC | 1 cut(s) | 2622 |
| BsgI | GTGCAG | 2 cut(s) | 1411, 1879 |
| Bsh1236I | CGCG | 3 cut(s) | 2678, 2811, 3806 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2446 |
| BshFI | GGCC | 7 cut(s) | 1159, 1515, 2060, 2137, 2909, 3434, 3809 |
| BshNI | GGYRCC | 1 cut(s) | 1435 |
| BshVI | ATCGAT | 1 cut(s) | 2144 |
| BsiEI | CGRYCG | 1 cut(s) | 2446 |
| BsiHKAI | GWGCWC | 5 cut(s) | 595, 681, 847, 876, 1970 |
| BsiHKCI | CYCGRG | 3 cut(s) | 875, 1634, 1775 |
| BsiSI | CCGG | 4 cut(s) | 1160, 1608, 2057, 3423 |
| BslFI | GGGAC | 5 cut(s) | 39, 1229, 1740, 1881, 3335 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 108, 331, 2527, 2528, 3377, 3429, 3584, 4112, 4113 |
| BsmAI | GTCTC | 3 cut(s) | 2332, 2433, 3560 |
| BsmFI | GGGAC | 5 cut(s) | 39, 1229, 1740, 1881, 3335 |
| BsmI | GAATGC | 2 cut(s) | 496, 768 |
| BsnI | GGCC | 7 cut(s) | 1159, 1515, 2060, 2137, 2909, 3434, 3809 |
| BsoBI | CYCGRG | 3 cut(s) | 875, 1634, 1775 |
| Bsp1286I | GDGCHC | 7 cut(s) | 595, 681, 847, 876, 1801, 1970, 4201 |
| Bsp1407I | TGTACA | 3 cut(s) | 1469, 3410, 3755 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3121 |
| Bsp19I | CCATGG | 1 cut(s) | 2852 |
| BspACI | CCGC | 7 cut(s) | 39, 1165, 2678, 2809, 3399, 3804, 3806 |
| BspANI | GGCC | 7 cut(s) | 1159, 1515, 2060, 2137, 2909, 3434, 3809 |
| BspDI | ATCGAT | 1 cut(s) | 2144 |
| BspFNI | CGCG | 3 cut(s) | 2678, 2811, 3806 |
| BspHI | TCATGA | 1 cut(s) | 3829 |
| BspLI | GGNNCC | 7 cut(s) | 1217, 1437, 3072, 3107, 3323, 3865, 3963 |
| BspMAI | CTGCAG | 1 cut(s) | 2287 |
| BspPI | GGATC | 1 cut(s) | 455 |
| BspQI | GCTCTTC | 1 cut(s) | 2267 |
| BspT107I | GGYRCC | 1 cut(s) | 1435 |
| BspTI | CTTAAG | 2 cut(s) | 1409, 1550 |
| BsrBI | CCGCTC | 1 cut(s) | 1165 |
| BsrDI | GCAATG | 4 cut(s) | 102, 2217, 2752, 3781 |
| BsrGI | TGTACA | 3 cut(s) | 1469, 3410, 3755 |
| BsrI | ACTGG | 5 cut(s) | 2044, 2304, 2819, 3347, 4001 |
| BssECI | CCNNGG | 9 cut(s) | 108, 330, 585, 929, 1359, 2694, 2695, 2852, 3804 |
| BssNI | GRCGYC | 1 cut(s) | 1436 |
| BssT1I | CCWWGG | 4 cut(s) | 330, 929, 1359, 2852 |
| Bst2UI | CCWGG | 7 cut(s) | 109, 586, 2565, 2696, 3326, 3624, 3861 |
| Bst6I | CTCTTC | 5 cut(s) | 485, 513, 2267, 3254, 3522 |
| BstACI | GRCGYC | 1 cut(s) | 1436 |
| BstAFI | CTTAAG | 2 cut(s) | 1409, 1550 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 685 |
| BstAUI | TGTACA | 3 cut(s) | 1469, 3410, 3755 |
| BstBAI | YACGTR | 2 cut(s) | 676, 1043 |
| BstC8I | GCNNGC | 4 cut(s) | 814, 2279, 2283, 3946 |
| BstDSI | CCRYGG | 2 cut(s) | 2852, 3804 |
| BstEII | GGTNACC | 1 cut(s) | 1175 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3375 |
| BstF5I | GGATG | 8 cut(s) | 1493, 1703, 1844, 2218, 2589, 3046, 3334, 4122 |
| BstFNI | CGCG | 3 cut(s) | 2678, 2811, 3806 |
| BstH2I | RGCGCY | 2 cut(s) | 1439, 3706 |
| BstHHI | GCGC | 4 cut(s) | 1438, 2389, 2678, 3705 |
| BstMAI | GTCTC | 3 cut(s) | 2332, 2433, 3560 |
| BstMCI | CGRYCG | 1 cut(s) | 2446 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 685, 2077, 2408, 2675, 3114, 3815, 4148 |
| BstNI | CCWGG | 7 cut(s) | 109, 586, 2565, 2696, 3326, 3624, 3861 |
| BstNSI | RCATGY | 4 cut(s) | 750, 1324, 2836, 3756 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 609, 1323 |
| BstPI | GGTNACC | 1 cut(s) | 1175 |
| BstSCI | CCNGG | 9 cut(s) | 107, 584, 2055, 2563, 2694, 3324, 3421, 3622, 3859 |
| BstSFI | CTRYAG | 2 cut(s) | 893, 2283 |
| BstSLI | GKGCMC | 2 cut(s) | 681, 1801 |
| BstUI | CGCG | 3 cut(s) | 2678, 2811, 3806 |
| BstV1I | GCAGC | 8 cut(s) | 28, 1351, 1598, 1739, 2297, 3104, 3665, 4069 |
| BstV2I | GAAGAC | 5 cut(s) | 1550, 1904, 2601, 2958, 4133 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 621, 2637 |
| Bsu15I | ATCGAT | 1 cut(s) | 2144 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2526 |
| BsuI | GTATCC | 3 cut(s) | 331, 964, 2029 |
| BsuRI | GGCC | 7 cut(s) | 1159, 1515, 2060, 2137, 2909, 3434, 3809 |
| BsuTUI | ATCGAT | 1 cut(s) | 2144 |
| BtgI | CCRYGG | 2 cut(s) | 2852, 3804 |
| BtrI | CACGTC | 1 cut(s) | 542 |
| BtsCI | GGATG | 8 cut(s) | 1493, 1703, 1844, 2218, 2589, 3046, 3334, 4122 |
| BtsI | GCAGTG | 4 cut(s) | 823, 1683, 1831, 3139 |
| BtsIMutI | CAGTG | 8 cut(s) | 823, 1428, 1542, 1683, 1831, 2901, 3139, 4008 |
| Cac8I | GCNNGC | 4 cut(s) | 814, 2279, 2283, 3946 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1926 |
| CciI | TCATGA | 1 cut(s) | 3829 |
| CfoI | GCGC | 4 cut(s) | 1438, 2389, 2678, 3705 |
| Cfr13I | GGNCC | 5 cut(s) | 1216, 3322, 3432, 3575, 4208 |
| Cfr42I | CCGCGG | 1 cut(s) | 3807 |
| ClaI | ATCGAT | 1 cut(s) | 2144 |
| CseI | GACGC | 2 cut(s) | 476, 1313 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1461, 1496 |
| DinI | GGCGCC | 1 cut(s) | 1437 |
| DraI | TTTAAA | 1 cut(s) | 2007 |
| DraIII | CACNNNGTG | 2 cut(s) | 676, 685 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3839 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3573 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3839 |
| EaeI | YGGCCR | 3 cut(s) | 1157, 2135, 3807 |
| Eam1104I | CTCTTC | 5 cut(s) | 485, 513, 2267, 3254, 3522 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3573 |
| EarI | CTCTTC | 5 cut(s) | 485, 513, 2267, 3254, 3522 |
| Ecl136II | GAGCTC | 3 cut(s) | 593, 845, 874 |
| Eco130I | CCWWGG | 4 cut(s) | 330, 929, 1359, 2852 |
| Eco147I | AGGCCT | 1 cut(s) | 1515 |
| Eco24I | GRGCYC | 4 cut(s) | 595, 847, 876, 4201 |
| Eco32I | GATATC | 3 cut(s) | 742, 913, 2440 |
| Eco47I | GGWCC | 4 cut(s) | 1216, 3322, 3575, 4208 |
| Eco47III | AGCGCT | 1 cut(s) | 3704 |
| Eco53kI | GAGCTC | 3 cut(s) | 593, 845, 874 |
| Eco57I | CTGAAG | 5 cut(s) | 481, 1430, 2219, 2291, 3591 |
| Eco72I | CACGTG | 1 cut(s) | 676 |
| Eco81I | CCTNAGG | 1 cut(s) | 2526 |
| Eco88I | CYCGRG | 3 cut(s) | 875, 1634, 1775 |
| Eco91I | GGTNACC | 1 cut(s) | 1175 |
| EcoICRI | GAGCTC | 3 cut(s) | 593, 845, 874 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3375 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1216, 3322, 3575 |
| EcoO65I | GGTNACC | 1 cut(s) | 1175 |
| EcoRII | CCWGG | 7 cut(s) | 107, 584, 2563, 2694, 3324, 3622, 3859 |
| EcoRV | GATATC | 3 cut(s) | 742, 913, 2440 |
| EcoT14I | CCWWGG | 4 cut(s) | 330, 929, 1359, 2852 |
| EcoT38I | GRGCYC | 4 cut(s) | 595, 847, 876, 4201 |
| EgeI | GGCGCC | 1 cut(s) | 1437 |
| EheI | GGCGCC | 1 cut(s) | 1437 |
| ErhI | CCWWGG | 4 cut(s) | 330, 929, 1359, 2852 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 2109, 2141, 3708, 3740, 4020, 4052 |
| FaqI | GGGAC | 5 cut(s) | 39, 1229, 1740, 1881, 3335 |
| FauI | CCCGC | 1 cut(s) | 3392 |
| FauNDI | CATATG | 2 cut(s) | 1108, 1575 |
| FbaI | TGATCA | 1 cut(s) | 142 |
| Fnu4HI | GCNGC | 9 cut(s) | 42, 1365, 1612, 1753, 2286, 3118, 3679, 3807, 4058 |
| FokI | GGATG | 8 cut(s) | 1480, 1690, 1831, 2225, 2576, 3053, 3341, 4129 |
| FriOI | GRGCYC | 4 cut(s) | 595, 847, 876, 4201 |
| Fsp4HI | GCNGC | 9 cut(s) | 42, 1365, 1612, 1753, 2286, 3118, 3679, 3807, 4058 |
| FspAI | RTGCGCAY | 1 cut(s) | 2388 |
| FspBI | CTAG | 7 cut(s) | 302, 405, 422, 662, 710, 737, 3761 |
| FspI | TGCGCA | 1 cut(s) | 2388 |
| GlaI | GCGC | 4 cut(s) | 1437, 2388, 2677, 3704 |
| GluI | GCNGC | 9 cut(s) | 42, 1365, 1612, 1753, 2286, 3118, 3679, 3807, 4058 |
| GsaI | CCCAGC | 1 cut(s) | 2626 |
| HaeII | RGCGCY | 2 cut(s) | 1439, 3706 |
| HaeIII | GGCC | 7 cut(s) | 1159, 1515, 2060, 2137, 2909, 3434, 3809 |
| HapII | CCGG | 4 cut(s) | 1160, 1608, 2057, 3423 |
| HgaI | GACGC | 2 cut(s) | 476, 1313 |
| HhaI | GCGC | 4 cut(s) | 1438, 2389, 2678, 3705 |
| Hin1I | GRCGYC | 1 cut(s) | 1436 |
| Hin6I | GCGC | 4 cut(s) | 1436, 2387, 2676, 3703 |
| HinP1I | GCGC | 4 cut(s) | 1436, 2387, 2676, 3703 |
| HincII | GTYRAC | 4 cut(s) | 244, 1312, 3534, 4033 |
| HindII | GTYRAC | 4 cut(s) | 244, 1312, 3534, 4033 |
| HindIII | AAGCTT | 4 cut(s) | 697, 1056, 1442, 2078 |
| HpaI | GTTAAC | 1 cut(s) | 4033 |
| HpaII | CCGG | 4 cut(s) | 1160, 1608, 2057, 3423 |
| HphI | GGTGA | 8 cut(s) | 137, 662, 881, 3098, 3610, 3840, 3849, 4005 |
| Hpy99I | CGWCG | 2 cut(s) | 317, 1196 |
| HpyCH4IV | ACGT | 5 cut(s) | 367, 525, 541, 675, 1042 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 685, 2077, 2408, 2675, 3114, 3815, 4148 |
| HpySE526I | ACGT | 5 cut(s) | 367, 525, 541, 675, 1042 |
| Hsp92I | GRCGYC | 1 cut(s) | 1436 |
| HspAI | GCGC | 4 cut(s) | 1436, 2387, 2676, 3703 |
| KasI | GGCGCC | 1 cut(s) | 1435 |
| Ksp22I | TGATCA | 1 cut(s) | 142 |
| KspAI | GTTAAC | 1 cut(s) | 4033 |
| KspI | CCGCGG | 1 cut(s) | 3807 |
| LguI | GCTCTTC | 1 cut(s) | 2267 |
| Lsp1109I | GCAGC | 8 cut(s) | 28, 1351, 1598, 1739, 2297, 3104, 3665, 4069 |
| MaeI | CTAG | 7 cut(s) | 302, 405, 422, 662, 710, 737, 3761 |
| MaeII | ACGT | 5 cut(s) | 367, 525, 541, 675, 1042 |
| MbiI | CCGCTC | 1 cut(s) | 1165 |
| MfeI | CAATTG | 4 cut(s) | 1710, 1851, 2321, 4095 |
| MhlI | GDGCHC | 7 cut(s) | 595, 681, 847, 876, 1801, 1970, 4201 |
| MlsI | TGGCCA | 1 cut(s) | 2137 |
| MluNI | TGGCCA | 1 cut(s) | 2137 |
| Mly113I | GGCGCC | 1 cut(s) | 1436 |
| MlyI | GAGTC | 5 cut(s) | 1022, 1564, 2046, 3651, 4018 |
| MmeI | TCCRAC | 9 cut(s) | 46, 255, 269, 615, 1311, 3260, 3488, 3652, 4248 |
| Mox20I | TGGCCA | 1 cut(s) | 2137 |
| MroXI | GAANNNNTTC | 7 cut(s) | 494, 786, 963, 1719, 1860, 2316, 3723 |
| MscI | TGGCCA | 1 cut(s) | 2137 |
| MslI | CAYNNNNRTG | 7 cut(s) | 269, 600, 619, 1209, 1574, 2837, 4115 |
| Msp20I | TGGCCA | 1 cut(s) | 2137 |
| MspA1I | CMGCKG | 4 cut(s) | 41, 2476, 3125, 3806 |
| MspCI | CTTAAG | 2 cut(s) | 1409, 1550 |
| MspI | CCGG | 4 cut(s) | 1160, 1608, 2057, 3423 |
| MspR9I | CCNGG | 9 cut(s) | 109, 586, 2057, 2565, 2696, 3326, 3423, 3624, 3861 |
| MunI | CAATTG | 4 cut(s) | 1710, 1851, 2321, 4095 |
| Mva1269I | GAATGC | 2 cut(s) | 496, 768 |
| MvaI | CCWGG | 7 cut(s) | 109, 586, 2565, 2696, 3326, 3624, 3861 |
| MvnI | CGCG | 3 cut(s) | 2678, 2811, 3806 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 685, 2077, 2408, 2675, 3114, 3815, 4148 |
| NarI | GGCGCC | 1 cut(s) | 1436 |
| NciI | CCSGG | 2 cut(s) | 2057, 3423 |
| NcoI | CCATGG | 1 cut(s) | 2852 |
| NdeI | CATATG | 2 cut(s) | 1108, 1575 |
| NlaIV | GGNNCC | 7 cut(s) | 1217, 1437, 3072, 3107, 3323, 3865, 3963 |
| NmuCI | GTSAC | 5 cut(s) | 602, 2987, 3140, 3152, 4171 |
| NsbI | TGCGCA | 1 cut(s) | 2388 |
| NspI | RCATGY | 4 cut(s) | 750, 1324, 2836, 3756 |
| PaeR7I | CTCGAG | 1 cut(s) | 875 |
| PagI | TCATGA | 1 cut(s) | 3829 |
| PasI | CCCWGGG | 1 cut(s) | 2695 |
| PceI | AGGCCT | 1 cut(s) | 1515 |
| PciI | ACATGT | 2 cut(s) | 2832, 3752 |
| PciSI | GCTCTTC | 1 cut(s) | 2267 |
| PctI | GAATGC | 2 cut(s) | 496, 768 |
| PdmI | GAANNNNTTC | 7 cut(s) | 494, 786, 963, 1719, 1860, 2316, 3723 |
| PfeI | GAWTC | 8 cut(s) | 5, 69, 225, 1092, 2293, 3018, 3248, 4220 |
| PflFI | GACNNNGTC | 1 cut(s) | 4132 |
| PfoI | TCCNGGA | 1 cut(s) | 2563 |
| PkrI | GCNGC | 9 cut(s) | 43, 1366, 1613, 1754, 2287, 3119, 3680, 3808, 4059 |
| PleI | GAGTC | 5 cut(s) | 1022, 1563, 2046, 3650, 4018 |
| PluTI | GGCGCC | 1 cut(s) | 1439 |
| PmaCI | CACGTG | 1 cut(s) | 676 |
| PmlI | CACGTG | 1 cut(s) | 676 |
| PpsI | GAGTC | 5 cut(s) | 1022, 1563, 2046, 3650, 4018 |
| Ppu21I | YACGTR | 2 cut(s) | 676, 1043 |
| PpuMI | RGGWCCY | 3 cut(s) | 1216, 3322, 3575 |
| PscI | ACATGT | 2 cut(s) | 2832, 3752 |
| PshAI | GACNNNNGTC | 2 cut(s) | 609, 1323 |
| PshBI | ATTAAT | 1 cut(s) | 2871 |
| PsiI | TTATAA | 1 cut(s) | 4070 |
| Psp124BI | GAGCTC | 3 cut(s) | 595, 847, 876 |
| Psp1406I | AACGTT | 1 cut(s) | 367 |
| Psp5II | RGGWCCY | 3 cut(s) | 1216, 3322, 3575 |
| Psp6I | CCWGG | 7 cut(s) | 107, 584, 2563, 2694, 3324, 3622, 3859 |
| PspCI | CACGTG | 1 cut(s) | 676 |
| PspEI | GGTNACC | 1 cut(s) | 1175 |
| PspFI | CCCAGC | 1 cut(s) | 2622 |
| PspGI | CCWGG | 7 cut(s) | 107, 584, 2563, 2694, 3324, 3622, 3859 |
| PspN4I | GGNNCC | 7 cut(s) | 1217, 1437, 3072, 3107, 3323, 3865, 3963 |
| PspPI | GGNCC | 5 cut(s) | 1216, 3322, 3432, 3575, 4208 |
| PspPPI | RGGWCCY | 3 cut(s) | 1216, 3322, 3575 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3063, 3095 |
| PstI | CTGCAG | 1 cut(s) | 2287 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1926 |
| PsyI | GACNNNGTC | 1 cut(s) | 4132 |
| PvuII | CAGCTG | 2 cut(s) | 2476, 3125 |
| RseI | CAYNNNNRTG | 7 cut(s) | 269, 600, 619, 1209, 1574, 2837, 4115 |
| SacI | GAGCTC | 3 cut(s) | 595, 847, 876 |
| SacII | CCGCGG | 1 cut(s) | 3807 |
| SapI | GCTCTTC | 1 cut(s) | 2267 |
| SatI | GCNGC | 9 cut(s) | 42, 1365, 1612, 1753, 2286, 3118, 3679, 3807, 4058 |
| Sau96I | GGNCC | 5 cut(s) | 1216, 3322, 3432, 3575, 4208 |
| ScaI | AGTACT | 1 cut(s) | 420 |
| SchI | GAGTC | 5 cut(s) | 1022, 1564, 2046, 3651, 4018 |
| ScrFI | CCNGG | 9 cut(s) | 109, 586, 2057, 2565, 2696, 3326, 3423, 3624, 3861 |
| SduI | GDGCHC | 7 cut(s) | 595, 681, 847, 876, 1801, 1970, 4201 |
| SfcI | CTRYAG | 2 cut(s) | 893, 2283 |
| SfoI | GGCGCC | 1 cut(s) | 1437 |
| Sfr274I | CTCGAG | 1 cut(s) | 875 |
| Sfr303I | CCGCGG | 1 cut(s) | 3807 |
| SgrBI | CCGCGG | 1 cut(s) | 3807 |
| SinI | GGWCC | 4 cut(s) | 1216, 3322, 3575, 4208 |
| SlaI | CTCGAG | 1 cut(s) | 875 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 269, 600, 619, 1209, 1574, 2837, 4115 |
| SseBI | AGGCCT | 1 cut(s) | 1515 |
| SsiI | CCGC | 7 cut(s) | 39, 1165, 2678, 2809, 3399, 3804, 3806 |
| SspDI | GGCGCC | 1 cut(s) | 1435 |
| SspI | AATATT | 1 cut(s) | 2788 |
| SspMI | CTAG | 7 cut(s) | 302, 405, 422, 662, 710, 737, 3761 |
| SstI | GAGCTC | 3 cut(s) | 595, 847, 876 |
| StuI | AGGCCT | 1 cut(s) | 1515 |
| StyD4I | CCNGG | 9 cut(s) | 107, 584, 2055, 2563, 2694, 3324, 3421, 3622, 3859 |
| StyI | CCWWGG | 4 cut(s) | 330, 929, 1359, 2852 |
| TaiI | ACGT | 5 cut(s) | 370, 528, 544, 678, 1045 |
| TaqII | GACCGA | 1 cut(s) | 2432 |
| TatI | WGTACW | 7 cut(s) | 196, 418, 1469, 2159, 3410, 3697, 3755 |
| TauI | GCSGC | 1 cut(s) | 3809 |
| TfiI | GAWTC | 8 cut(s) | 5, 69, 225, 1092, 2293, 3018, 3248, 4220 |
| TscAI | CASTG | 8 cut(s) | 823, 1435, 1549, 1690, 1831, 2908, 3139, 4008 |
| TseFI | GTSAC | 5 cut(s) | 602, 2987, 3140, 3152, 4171 |
| TseI | GCWGC | 8 cut(s) | 41, 1364, 1611, 1752, 2285, 3117, 3678, 4057 |
| Tsp45I | GTSAC | 5 cut(s) | 602, 2987, 3140, 3152, 4171 |
| TspGWI | ACGGA | 2 cut(s) | 2602, 3401 |
| TspRI | CASTG | 8 cut(s) | 823, 1435, 1549, 1690, 1831, 2908, 3139, 4008 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4132 |
| Vha464I | CTTAAG | 2 cut(s) | 1409, 1550 |
| VneI | GTGCAC | 1 cut(s) | 677 |
| VpaK11BI | GGWCC | 4 cut(s) | 1216, 3322, 3575, 4208 |
| VspI | ATTAAT | 1 cut(s) | 2871 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3375 |
| XbaI | TCTAGA | 1 cut(s) | 736 |
| XceI | RCATGY | 4 cut(s) | 750, 1324, 2836, 3756 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2296, 3062 |
| XhoI | CTCGAG | 1 cut(s) | 875 |
| XmnI | GAANNNNTTC | 7 cut(s) | 494, 786, 963, 1719, 1860, 2316, 3723 |
| XspI | CTAG | 7 cut(s) | 302, 405, 422, 662, 710, 737, 3761 |
| ZrmI | AGTACT | 1 cut(s) | 420 |