TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 39 - 203 | 4.7e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 272 - 340 | 1.4e-21 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 571 - 659 | 6.8e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 580 - 662 | 1.3e-13 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 650 - 736 | 9.9e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 652 - 756 | 3.7e-09 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 745 - 830 | 8.2e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 745 - 846 | 8.6e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 828 - 993 | 7.2e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 862 - 958 | 3.9e-06 | Leucine-rich repeat region |
| C-JID | PF20160 | 1023 - 1163 | 1.1e-13 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 281 |
| Acc36I | ACCTGC | 2 cut(s) | 295, 3705 |
| AccB1I | GGYRCC | 3 cut(s) | 2626, 3801, 3925 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3565 |
| AccIII | TCCGGA | 2 cut(s) | 2002, 2284 |
| AciI | CCGC | 8 cut(s) | 907, 1012, 2116, 2337, 2398, 3462, 3575, 4073 |
| AclWI | GGATC | 5 cut(s) | 1698, 1747, 1760, 1970, 2190 |
| AcoI | YGGCCR | 3 cut(s) | 2642, 3295, 3556 |
| AcsI | RAATTY | 7 cut(s) | 124, 768, 878, 1534, 2135, 2989, 3931 |
| AcuI | CTGAAG | 5 cut(s) | 125, 583, 2225, 2938, 3178 |
| AdeI | CACNNNGTG | 1 cut(s) | 3941 |
| AfaI | GTAC | 3 cut(s) | 297, 2982, 3305 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 911, 1352, 3440, 3544, 3565 |
| AflII | CTTAAG | 4 cut(s) | 1712, 1922, 2107, 2204 |
| AflIII | ACRYGT | 2 cut(s) | 3060, 3336 |
| AhlI | ACTAGT | 1 cut(s) | 3452 |
| AjnI | CCWGG | 4 cut(s) | 1033, 2532, 3070, 3804 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 438, 470, 3223, 3255 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 906, 938, 3066, 3098, 3415, 3447 |
| Alw21I | GWGCWC | 4 cut(s) | 940, 2480, 3205, 3631 |
| Alw26I | GTCTC | 8 cut(s) | 530, 615, 848, 2327, 2422, 2505, 3852, 3880 |
| AlwI | GGATC | 5 cut(s) | 1698, 1747, 1760, 1970, 2190 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1528, 2154, 2436 |
| Aor13HI | TCCGGA | 2 cut(s) | 2002, 2284 |
| AoxI | GGCC | 4 cut(s) | 2642, 3295, 3556, 4004 |
| ApeKI | GCWGC | 9 cut(s) | 1728, 1980, 2262, 3459, 3580, 3906, 4014, 4017, 4070 |
| ApoI | RAATTY | 7 cut(s) | 124, 768, 878, 1534, 2135, 2989, 3931 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 855, 887, 2400, 2432 |
| Asp700I | GAANNNNTTC | 8 cut(s) | 103, 825, 1616, 1788, 1998, 2139, 2280, 3146 |
| AspS9I | GGNCC | 3 cut(s) | 2530, 3243, 4004 |
| AsuC2I | CCSGG | 1 cut(s) | 3539 |
| AsuHPI | GGTGA | 8 cut(s) | 17, 157, 488, 961, 3275, 3713, 3859, 4046 |
| AsuII | TTCGAA | 1 cut(s) | 240 |
| AvaII | GGWCC | 2 cut(s) | 2530, 3243 |
| BalI | TGGCCA | 3 cut(s) | 2644, 3297, 3558 |
| BamHI | GGATCC | 1 cut(s) | 1752 |
| BanI | GGYRCC | 3 cut(s) | 2626, 3801, 3925 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2547, 2579 |
| BbsI | GAAGAC | 2 cut(s) | 131, 3059 |
| Bbv12I | GWGCWC | 4 cut(s) | 940, 2480, 3205, 3631 |
| BbvI | GCAGC | 9 cut(s) | 1715, 1967, 2249, 3446, 3592, 3918, 4004, 4026, 4082 |
| BceAI | ACGGC | 4 cut(s) | 716, 1110, 2070, 2640 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 209, 243, 1588, 1622, 3033, 3067 |
| BciT130I | CCWGG | 4 cut(s) | 1035, 2534, 3072, 3806 |
| BciVI | GTATCC | 1 cut(s) | 3100 |
| BclI | TGATCA | 2 cut(s) | 60, 2083 |
| BcnI | CCSGG | 1 cut(s) | 3539 |
| BcoDI | GTCTC | 8 cut(s) | 530, 615, 848, 2327, 2422, 2505, 3852, 3880 |
| BcuI | ACTAGT | 1 cut(s) | 3452 |
| BfmI | CTRYAG | 1 cut(s) | 1607 |
| BfrI | CTTAAG | 4 cut(s) | 1712, 1922, 2107, 2204 |
| BfuAI | ACCTGC | 2 cut(s) | 295, 3705 |
| BfuI | GTATCC | 1 cut(s) | 3100 |
| BglII | AGATCT | 1 cut(s) | 1900 |
| BisI | GCNGC | 9 cut(s) | 1729, 1981, 2263, 3460, 3581, 3907, 4015, 4018, 4071 |
| BlpI | GCTNAGC | 1 cut(s) | 2479 |
| BlsI | GCNGC | 9 cut(s) | 1730, 1982, 2264, 3461, 3582, 3908, 4016, 4019, 4072 |
| Bme1390I | CCNGG | 5 cut(s) | 1035, 2534, 3072, 3539, 3806 |
| Bme18I | GGWCC | 2 cut(s) | 2530, 3243 |
| BmgT120I | GGNCC | 3 cut(s) | 2530, 3243, 4004 |
| BmiI | GGNNCC | 4 cut(s) | 1754, 2628, 3803, 3927 |
| BmrFI | CCNGG | 5 cut(s) | 1035, 2534, 3072, 3539, 3806 |
| BmsI | GCATC | 6 cut(s) | 1093, 1415, 2833, 2884, 3385, 3562 |
| BoxI | GACNNNNGTC | 1 cut(s) | 363 |
| BpiI | GAAGAC | 2 cut(s) | 131, 3059 |
| BpmI | CTGGAG | 2 cut(s) | 1185, 1390 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2479 |
| Bpu14I | TTCGAA | 1 cut(s) | 240 |
| BpuEI | CTTGAG | 4 cut(s) | 596, 622, 645, 2111 |
| BpuMI | CCSGG | 1 cut(s) | 3539 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3036 |
| BsaI | GGTCTC | 1 cut(s) | 2327 |
| BsaWI | WCCGGW | 2 cut(s) | 2002, 2284 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1158, 1188, 3671, 3701, 3849, 3879 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 911, 1352, 3440, 3544, 3565 |
| Bse1I | ACTGG | 4 cut(s) | 1168, 1888, 3424, 4031 |
| Bse3DI | GCAATG | 3 cut(s) | 111, 201, 916 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3036 |
| BseAI | TCCGGA | 2 cut(s) | 2002, 2284 |
| BseBI | CCWGG | 4 cut(s) | 1035, 2534, 3072, 3806 |
| BseJI | GATNNNNATC | 1 cut(s) | 3036 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 911, 1352, 3440, 3544, 3565 |
| BseMI | GCAATG | 3 cut(s) | 111, 201, 916 |
| BseMII | CTCAG | 4 cut(s) | 1785, 2490, 2493, 3037 |
| BseNI | ACTGG | 4 cut(s) | 1168, 1888, 3424, 4031 |
| BseRI | GAGGAG | 2 cut(s) | 3506, 3782 |
| BseXI | GCAGC | 9 cut(s) | 1715, 1967, 2249, 3446, 3592, 3918, 4004, 4026, 4082 |
| BseYI | CCCAGC | 1 cut(s) | 4030 |
| BsgI | GTGCAG | 3 cut(s) | 362, 2788, 3599 |
| BshFI | GGCC | 4 cut(s) | 2644, 3297, 3558, 4006 |
| BshNI | GGYRCC | 3 cut(s) | 2626, 3801, 3925 |
| BsiHKAI | GWGCWC | 4 cut(s) | 940, 2480, 3205, 3631 |
| BsiSI | CCGG | 4 cut(s) | 2003, 2285, 2974, 3538 |
| BslFI | GGGAC | 6 cut(s) | 1329, 1391, 1855, 2065, 2132, 3986 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 911, 1352, 3440, 3544, 3565 |
| BsmAI | GTCTC | 8 cut(s) | 530, 615, 848, 2327, 2422, 2505, 3852, 3880 |
| BsmFI | GGGAC | 6 cut(s) | 1329, 1391, 1855, 2065, 2132, 3986 |
| BsmI | GAATGC | 5 cut(s) | 1118, 1731, 1941, 2223, 3821 |
| BsnI | GGCC | 4 cut(s) | 2644, 3297, 3558, 4006 |
| Bso31I | GGTCTC | 1 cut(s) | 2327 |
| Bsp119I | TTCGAA | 1 cut(s) | 240 |
| Bsp1286I | GDGCHC | 4 cut(s) | 940, 2480, 3205, 3631 |
| Bsp13I | TCCGGA | 2 cut(s) | 2002, 2284 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2479 |
| BspACI | CCGC | 8 cut(s) | 907, 1012, 2116, 2337, 2398, 3462, 3575, 4073 |
| BspANI | GGCC | 4 cut(s) | 2644, 3297, 3558, 4006 |
| BspCNI | CTCAG | 4 cut(s) | 1786, 2491, 2492, 3036 |
| BspEI | TCCGGA | 2 cut(s) | 2002, 2284 |
| BspHI | TCATGA | 5 cut(s) | 1396, 2019, 2301, 3208, 3487 |
| BspLI | GGNNCC | 4 cut(s) | 1754, 2628, 3803, 3927 |
| BspMAI | CTGCAG | 1 cut(s) | 1611 |
| BspMI | ACCTGC | 2 cut(s) | 295, 3705 |
| BspPI | GGATC | 5 cut(s) | 1698, 1747, 1760, 1970, 2190 |
| BspQI | GCTCTTC | 1 cut(s) | 1674 |
| BspT104I | TTCGAA | 1 cut(s) | 240 |
| BspT107I | GGYRCC | 3 cut(s) | 2626, 3801, 3925 |
| BspTI | CTTAAG | 4 cut(s) | 1712, 1922, 2107, 2204 |
| BspTNI | GGTCTC | 1 cut(s) | 2327 |
| BsrDI | GCAATG | 3 cut(s) | 111, 201, 916 |
| BsrI | ACTGG | 4 cut(s) | 1168, 1888, 3424, 4031 |
| Bst2UI | CCWGG | 4 cut(s) | 1035, 2534, 3072, 3806 |
| Bst4CI | ACNGT | 7 cut(s) | 1268, 2150, 2432, 2923, 3443, 3633, 3914 |
| Bst6I | CTCTTC | 6 cut(s) | 1674, 1962, 2244, 2427, 3948, 3985 |
| BstAFI | CTTAAG | 4 cut(s) | 1712, 1922, 2107, 2204 |
| BstBI | TTCGAA | 1 cut(s) | 240 |
| BstC8I | GCNNGC | 8 cut(s) | 20, 232, 645, 1706, 2842, 3158, 3299, 4085 |
| BstMAI | GTCTC | 8 cut(s) | 530, 615, 848, 2327, 2422, 2505, 3852, 3880 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 935, 1103, 1825, 2035, 2095, 2317, 2377, 4070 |
| BstNI | CCWGG | 4 cut(s) | 1035, 2534, 3072, 3806 |
| BstNSI | RCATGY | 5 cut(s) | 470, 843, 1486, 3064, 3340 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 363 |
| BstSCI | CCNGG | 5 cut(s) | 1033, 2532, 3070, 3537, 3804 |
| BstSFI | CTRYAG | 1 cut(s) | 1607 |
| BstV1I | GCAGC | 9 cut(s) | 1715, 1967, 2249, 3446, 3592, 3918, 4004, 4026, 4082 |
| BstV2I | GAAGAC | 2 cut(s) | 131, 3059 |
| BstX2I | RGATCY | 5 cut(s) | 1690, 1752, 1900, 1962, 2182 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 91, 2471 |
| BstYI | RGATCY | 5 cut(s) | 1690, 1752, 1900, 1962, 2182 |
| BsuI | GTATCC | 1 cut(s) | 3100 |
| BsuRI | GGCC | 4 cut(s) | 2644, 3297, 3558, 4006 |
| BtsI | GCAGTG | 2 cut(s) | 1306, 1558 |
| BtsIMutI | CAGTG | 7 cut(s) | 1306, 1558, 1881, 2658, 3137, 3202, 3919 |
| BveI | ACCTGC | 2 cut(s) | 295, 3705 |
| Cac8I | GCNNGC | 8 cut(s) | 20, 232, 645, 1706, 2842, 3158, 3299, 4085 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1528, 2154, 2436 |
| CciI | TCATGA | 5 cut(s) | 1396, 2019, 2301, 3208, 3487 |
| Cfr13I | GGNCC | 3 cut(s) | 2530, 3243, 4004 |
| Csp6I | GTAC | 3 cut(s) | 296, 2981, 3304 |
| CviQI | GTAC | 3 cut(s) | 296, 2981, 3304 |
| DraIII | CACNNNGTG | 1 cut(s) | 3941 |
| EaeI | YGGCCR | 3 cut(s) | 2642, 3295, 3556 |
| Eam1104I | CTCTTC | 6 cut(s) | 1674, 1962, 2244, 2427, 3948, 3985 |
| EarI | CTCTTC | 6 cut(s) | 1674, 1962, 2244, 2427, 3948, 3985 |
| EciI | GGCGGA | 1 cut(s) | 1001 |
| Eco31I | GGTCTC | 1 cut(s) | 2327 |
| Eco32I | GATATC | 1 cut(s) | 3894 |
| Eco47I | GGWCC | 2 cut(s) | 2530, 3243 |
| Eco57I | CTGAAG | 5 cut(s) | 125, 583, 2225, 2938, 3178 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2530 |
| EcoRI | GAATTC | 1 cut(s) | 124 |
| EcoRII | CCWGG | 4 cut(s) | 1033, 2532, 3070, 3804 |
| EcoRV | GATATC | 1 cut(s) | 3894 |
| EcoT22I | ATGCAT | 4 cut(s) | 472, 1157, 3182, 3400 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 438, 470 |
| FaqI | GGGAC | 6 cut(s) | 1329, 1391, 1855, 2065, 2132, 3986 |
| FauI | CCCGC | 2 cut(s) | 914, 2109 |
| FauNDI | CATATG | 2 cut(s) | 1737, 2229 |
| FbaI | TGATCA | 2 cut(s) | 60, 2083 |
| Fnu4HI | GCNGC | 9 cut(s) | 1729, 1981, 2263, 3460, 3581, 3907, 4015, 4018, 4071 |
| Fsp4HI | GCNGC | 9 cut(s) | 1729, 1981, 2263, 3460, 3581, 3907, 4015, 4018, 4071 |
| GluI | GCNGC | 9 cut(s) | 1729, 1981, 2263, 3460, 3581, 3907, 4015, 4018, 4071 |
| GsaI | CCCAGC | 1 cut(s) | 4034 |
| GsuI | CTGGAG | 2 cut(s) | 1185, 1390 |
| HaeIII | GGCC | 4 cut(s) | 2644, 3297, 3558, 4006 |
| HapII | CCGG | 4 cut(s) | 2003, 2285, 2974, 3538 |
| HincII | GTYRAC | 2 cut(s) | 1147, 2820 |
| HindII | GTYRAC | 2 cut(s) | 1147, 2820 |
| HindIII | AAGCTT | 5 cut(s) | 20, 273, 790, 2838, 3158 |
| HpaI | GTTAAC | 1 cut(s) | 2820 |
| HpaII | CCGG | 4 cut(s) | 2003, 2285, 2974, 3538 |
| HphI | GGTGA | 8 cut(s) | 17, 157, 488, 961, 3275, 3713, 3859, 4046 |
| Hpy166II | GTNNAC | 4 cut(s) | 217, 1147, 1361, 2820 |
| Hpy8I | GTNNAC | 4 cut(s) | 217, 1147, 1361, 2820 |
| Hpy99I | CGWCG | 3 cut(s) | 76, 224, 1102 |
| HpyCH4III | ACNGT | 7 cut(s) | 1268, 2150, 2432, 2923, 3443, 3633, 3914 |
| HpyCH4IV | ACGT | 2 cut(s) | 1290, 2538 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 935, 1103, 1825, 2035, 2095, 2317, 2377, 4070 |
| HpySE526I | ACGT | 2 cut(s) | 1290, 2538 |
| Kpn2I | TCCGGA | 2 cut(s) | 2002, 2284 |
| Ksp22I | TGATCA | 2 cut(s) | 60, 2083 |
| KspAI | GTTAAC | 1 cut(s) | 2820 |
| LguI | GCTCTTC | 1 cut(s) | 1674 |
| LmnI | GCTCC | 5 cut(s) | 1166, 2026, 2308, 3626, 3787 |
| Lsp1109I | GCAGC | 9 cut(s) | 1715, 1967, 2249, 3446, 3592, 3918, 4004, 4026, 4082 |
| LweI | GCATC | 6 cut(s) | 1093, 1415, 2833, 2884, 3385, 3562 |
| MaeII | ACGT | 2 cut(s) | 1290, 2538 |
| MfeI | CAATTG | 2 cut(s) | 2079, 2361 |
| MflI | RGATCY | 5 cut(s) | 1690, 1752, 1900, 1962, 2182 |
| MhlI | GDGCHC | 4 cut(s) | 940, 2480, 3205, 3631 |
| MlsI | TGGCCA | 3 cut(s) | 2644, 3297, 3558 |
| MluNI | TGGCCA | 3 cut(s) | 2644, 3297, 3558 |
| MlyI | GAGTC | 9 cut(s) | 498, 1078, 1921, 2203, 3335, 3695, 3704, 3882, 3986 |
| MmeI | TCCRAC | 7 cut(s) | 76, 145, 347, 1156, 1307, 2694, 3458 |
| Mox20I | TGGCCA | 3 cut(s) | 2644, 3297, 3558 |
| Mph1103I | ATGCAT | 4 cut(s) | 472, 1157, 3182, 3400 |
| MroI | TCCGGA | 2 cut(s) | 2002, 2284 |
| MroXI | GAANNNNTTC | 8 cut(s) | 103, 825, 1616, 1788, 1998, 2139, 2280, 3146 |
| MscI | TGGCCA | 3 cut(s) | 2644, 3297, 3558 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1736, 1946, 2228, 3341 |
| Msp20I | TGGCCA | 3 cut(s) | 2644, 3297, 3558 |
| MspA1I | CMGCKG | 3 cut(s) | 3649, 4017, 4073 |
| MspCI | CTTAAG | 4 cut(s) | 1712, 1922, 2107, 2204 |
| MspI | CCGG | 4 cut(s) | 2003, 2285, 2974, 3538 |
| MspR9I | CCNGG | 5 cut(s) | 1035, 2534, 3072, 3539, 3806 |
| MunI | CAATTG | 2 cut(s) | 2079, 2361 |
| Mva1269I | GAATGC | 5 cut(s) | 1118, 1731, 1941, 2223, 3821 |
| MvaI | CCWGG | 4 cut(s) | 1035, 2534, 3072, 3806 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 935, 1103, 1825, 2035, 2095, 2317, 2377, 4070 |
| NciI | CCSGG | 1 cut(s) | 3539 |
| NdeI | CATATG | 2 cut(s) | 1737, 2229 |
| NlaIV | GGNNCC | 4 cut(s) | 1754, 2628, 3803, 3927 |
| NmuCI | GTSAC | 8 cut(s) | 871, 1268, 1493, 1556, 2699, 2794, 3508, 3865 |
| NsiI | ATGCAT | 4 cut(s) | 472, 1157, 3182, 3400 |
| NspI | RCATGY | 5 cut(s) | 470, 843, 1486, 3064, 3340 |
| NspV | TTCGAA | 1 cut(s) | 240 |
| PagI | TCATGA | 5 cut(s) | 1396, 2019, 2301, 3208, 3487 |
| PciI | ACATGT | 2 cut(s) | 3060, 3336 |
| PciSI | GCTCTTC | 1 cut(s) | 1674 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1756 |
| PctI | GAATGC | 5 cut(s) | 1118, 1731, 1941, 2223, 3821 |
| PdmI | GAANNNNTTC | 8 cut(s) | 103, 825, 1616, 1788, 1998, 2139, 2280, 3146 |
| PflFI | GACNNNGTC | 1 cut(s) | 3863 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3565 |
| PfoI | TCCNGGA | 1 cut(s) | 3070 |
| PkrI | GCNGC | 9 cut(s) | 1730, 1982, 2264, 3461, 3582, 3908, 4016, 4019, 4072 |
| PleI | GAGTC | 9 cut(s) | 497, 1078, 1921, 2203, 3334, 3694, 3703, 3881, 3985 |
| PpsI | GAGTC | 9 cut(s) | 497, 1078, 1921, 2203, 3334, 3694, 3703, 3881, 3985 |
| PpuMI | RGGWCCY | 1 cut(s) | 2530 |
| PscI | ACATGT | 2 cut(s) | 3060, 3336 |
| PshAI | GACNNNNGTC | 1 cut(s) | 363 |
| PsiI | TTATAA | 1 cut(s) | 281 |
| Psp5II | RGGWCCY | 1 cut(s) | 2530 |
| Psp6I | CCWGG | 4 cut(s) | 1033, 2532, 3070, 3804 |
| PspFI | CCCAGC | 1 cut(s) | 4030 |
| PspGI | CCWGG | 4 cut(s) | 1033, 2532, 3070, 3804 |
| PspN4I | GGNNCC | 4 cut(s) | 1754, 2628, 3803, 3927 |
| PspPI | GGNCC | 3 cut(s) | 2530, 3243, 4004 |
| PspPPI | RGGWCCY | 1 cut(s) | 2530 |
| PstI | CTGCAG | 1 cut(s) | 1611 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1528, 2154, 2436 |
| PsuI | RGATCY | 5 cut(s) | 1690, 1752, 1900, 1962, 2182 |
| PsyI | GACNNNGTC | 1 cut(s) | 3863 |
| PvuII | CAGCTG | 2 cut(s) | 3649, 4017 |
| RsaI | GTAC | 3 cut(s) | 297, 2982, 3305 |
| RsaNI | GTAC | 3 cut(s) | 296, 2981, 3304 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1736, 1946, 2228, 3341 |
| SapI | GCTCTTC | 1 cut(s) | 1674 |
| SatI | GCNGC | 9 cut(s) | 1729, 1981, 2263, 3460, 3581, 3907, 4015, 4018, 4071 |
| Sau96I | GGNCC | 3 cut(s) | 2530, 3243, 4004 |
| SchI | GAGTC | 9 cut(s) | 498, 1078, 1921, 2203, 3335, 3695, 3704, 3882, 3986 |
| ScrFI | CCNGG | 5 cut(s) | 1035, 2534, 3072, 3539, 3806 |
| SduI | GDGCHC | 4 cut(s) | 940, 2480, 3205, 3631 |
| SfaNI | GCATC | 6 cut(s) | 1093, 1415, 2833, 2884, 3385, 3562 |
| SfcI | CTRYAG | 1 cut(s) | 1607 |
| SfuI | TTCGAA | 1 cut(s) | 240 |
| SinI | GGWCC | 2 cut(s) | 2530, 3243 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1736, 1946, 2228, 3341 |
| SmlI | CTYRAG | 8 cut(s) | 575, 637, 660, 1712, 1922, 2090, 2107, 2204 |
| SmoI | CTYRAG | 8 cut(s) | 575, 637, 660, 1712, 1922, 2090, 2107, 2204 |
| SpeI | ACTAGT | 1 cut(s) | 3452 |
| SsiI | CCGC | 8 cut(s) | 907, 1012, 2116, 2337, 2398, 3462, 3575, 4073 |
| SspI | AATATT | 2 cut(s) | 825, 2663 |
| StyD4I | CCNGG | 5 cut(s) | 1033, 2532, 3070, 3537, 3804 |
| TaaI | ACNGT | 7 cut(s) | 1268, 2150, 2432, 2923, 3443, 3633, 3914 |
| TaiI | ACGT | 2 cut(s) | 1293, 2541 |
| TaqI | TCGA | 8 cut(s) | 74, 240, 1133, 1239, 1782, 1974, 2256, 2876 |
| TatI | WGTACW | 2 cut(s) | 295, 3303 |
| TscAI | CASTG | 7 cut(s) | 1306, 1565, 1888, 2658, 3144, 3202, 3919 |
| TseFI | GTSAC | 8 cut(s) | 871, 1268, 1493, 1556, 2699, 2794, 3508, 3865 |
| TseI | GCWGC | 9 cut(s) | 1728, 1980, 2262, 3459, 3580, 3906, 4014, 4017, 4070 |
| Tsp45I | GTSAC | 8 cut(s) | 871, 1268, 1493, 1556, 2699, 2794, 3508, 3865 |
| TspGWI | ACGGA | 3 cut(s) | 1115, 1765, 2581 |
| TspRI | CASTG | 7 cut(s) | 1306, 1565, 1888, 2658, 3144, 3202, 3919 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3863 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3565 |
| Vha464I | CTTAAG | 4 cut(s) | 1712, 1922, 2107, 2204 |
| VpaK11BI | GGWCC | 2 cut(s) | 2530, 3243 |
| XapI | RAATTY | 7 cut(s) | 124, 768, 878, 1534, 2135, 2989, 3931 |
| XbaI | TCTAGA | 3 cut(s) | 829, 883, 3322 |
| XceI | RCATGY | 5 cut(s) | 470, 843, 1486, 3064, 3340 |
| XmnI | GAANNNNTTC | 8 cut(s) | 103, 825, 1616, 1788, 1998, 2139, 2280, 3146 |
| Zsp2I | ATGCAT | 4 cut(s) | 472, 1157, 3182, 3400 |