WRKY Transcription Factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 149 |
| Acc36I | ACCTGC | 1 cut(s) | 181 |
| AccB1I | GGYRCC | 3 cut(s) | 7, 590, 1196 |
| AccII | CGCG | 1 cut(s) | 1127 |
| AciI | CCGC | 7 cut(s) | 570, 891, 926, 1047, 1125, 1127, 1145 |
| AclWI | GGATC | 5 cut(s) | 1077, 1090, 1344, 1357, 1401 |
| AcoI | YGGCCR | 3 cut(s) | 1309, 1330, 1407 |
| AcsI | RAATTY | 3 cut(s) | 471, 1255, 1264 |
| AcuI | CTGAAG | 2 cut(s) | 745, 822 |
| AcvI | CACGTG | 1 cut(s) | 1420 |
| AcyI | GRCGYC | 1 cut(s) | 8 |
| AfaI | GTAC | 3 cut(s) | 634, 659, 1234 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 418, 1092, 1093, 1110, 1111, 1146, 1174 |
| AflIII | ACRYGT | 1 cut(s) | 723 |
| AgsI | TTSAA | 7 cut(s) | 212, 235, 309, 354, 487, 586, 640 |
| AjnI | CCWGG | 3 cut(s) | 460, 729, 1104 |
| AluBI | AGCT | 7 cut(s) | 145, 168, 250, 293, 367, 426, 523 |
| AluI | AGCT | 7 cut(s) | 145, 168, 250, 293, 367, 426, 523 |
| Alw26I | GTCTC | 1 cut(s) | 1495 |
| AlwI | GGATC | 5 cut(s) | 1077, 1090, 1344, 1357, 1401 |
| AoxI | GGCC | 4 cut(s) | 1040, 1309, 1330, 1407 |
| ApeKI | GCWGC | 3 cut(s) | 145, 176, 520 |
| ApoI | RAATTY | 3 cut(s) | 471, 1255, 1264 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1155 |
| AspLEI | GCGC | 3 cut(s) | 10, 150, 1251 |
| AspS9I | GGNCC | 4 cut(s) | 1101, 1119, 1137, 1214 |
| AsuHPI | GGTGA | 1 cut(s) | 1033 |
| AvaII | GGWCC | 4 cut(s) | 1101, 1119, 1137, 1214 |
| BaeGI | GKGCMC | 1 cut(s) | 595 |
| BalI | TGGCCA | 2 cut(s) | 1332, 1409 |
| BamHI | GGATCC | 2 cut(s) | 1082, 1349 |
| BanI | GGYRCC | 3 cut(s) | 7, 590, 1196 |
| BbrPI | CACGTG | 1 cut(s) | 1420 |
| BbvI | GCAGC | 3 cut(s) | 132, 188, 532 |
| BccI | CCATC | 5 cut(s) | 88, 101, 498, 761, 1205 |
| BceAI | ACGGC | 2 cut(s) | 887, 1324 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 599, 633, 858, 892 |
| BciT130I | CCWGG | 3 cut(s) | 462, 731, 1106 |
| BciVI | GTATCC | 1 cut(s) | 1272 |
| BcoDI | GTCTC | 1 cut(s) | 1495 |
| BfmI | CTRYAG | 1 cut(s) | 174 |
| BfoI | RGCGCY | 1 cut(s) | 11 |
| BfuAI | ACCTGC | 1 cut(s) | 181 |
| BfuI | GTATCC | 1 cut(s) | 1272 |
| BisI | GCNGC | 3 cut(s) | 146, 177, 521 |
| BlpI | GCTNAGC | 1 cut(s) | 945 |
| BlsI | GCNGC | 3 cut(s) | 147, 178, 522 |
| Bme1390I | CCNGG | 3 cut(s) | 462, 731, 1106 |
| Bme18I | GGWCC | 4 cut(s) | 1101, 1119, 1137, 1214 |
| BmgT120I | GGNCC | 4 cut(s) | 1101, 1119, 1137, 1214 |
| BmiI | GGNNCC | 9 cut(s) | 9, 592, 924, 1084, 1102, 1103, 1120, 1198, 1351 |
| BmrFI | CCNGG | 3 cut(s) | 462, 731, 1106 |
| BmsI | GCATC | 7 cut(s) | 265, 592, 614, 888, 948, 1367, 1437 |
| BpmI | CTGGAG | 3 cut(s) | 347, 695, 1477 |
| Bpu10I | CCTNAGC | 1 cut(s) | 246 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 945 |
| BsaAI | YACGTR | 1 cut(s) | 1420 |
| BsaBI | GATNNNNATC | 3 cut(s) | 235, 1087, 1290 |
| BsaHI | GRCGYC | 1 cut(s) | 8 |
| BsaJI | CCNNGG | 5 cut(s) | 730, 743, 1104, 1125, 1140 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 418, 1092, 1093, 1110, 1111, 1146, 1174 |
| Bse118I | RCCGGY | 1 cut(s) | 778 |
| Bse1I | ACTGG | 2 cut(s) | 712, 1442 |
| Bse3DI | GCAATG | 2 cut(s) | 186, 874 |
| Bse8I | GATNNNNATC | 3 cut(s) | 235, 1087, 1290 |
| BseBI | CCWGG | 3 cut(s) | 462, 731, 1106 |
| BseDI | CCNNGG | 5 cut(s) | 730, 743, 1104, 1125, 1140 |
| BseGI | GGATG | 1 cut(s) | 605 |
| BseJI | GATNNNNATC | 3 cut(s) | 235, 1087, 1290 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 418, 1092, 1093, 1110, 1111, 1146, 1174 |
| BseMI | GCAATG | 2 cut(s) | 186, 874 |
| BseMII | CTCAG | 3 cut(s) | 237, 959, 1056 |
| BseNI | ACTGG | 2 cut(s) | 712, 1442 |
| BseSI | GKGCMC | 1 cut(s) | 595 |
| BseXI | GCAGC | 3 cut(s) | 132, 188, 532 |
| BsgI | GTGCAG | 1 cut(s) | 539 |
| Bsh1236I | CGCG | 1 cut(s) | 1127 |
| BshFI | GGCC | 4 cut(s) | 1042, 1311, 1332, 1409 |
| BshNI | GGYRCC | 3 cut(s) | 7, 590, 1196 |
| BsiSI | CCGG | 1 cut(s) | 779 |
| BslFI | GGGAC | 1 cut(s) | 1087 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 418, 1092, 1093, 1110, 1111, 1146, 1174 |
| BsmAI | GTCTC | 1 cut(s) | 1495 |
| BsmBI | CGTCTC | 1 cut(s) | 1495 |
| BsmFI | GGGAC | 1 cut(s) | 1087 |
| BsnI | GGCC | 4 cut(s) | 1042, 1311, 1332, 1409 |
| Bsp1286I | GDGCHC | 1 cut(s) | 595 |
| Bsp143I | GATC | 5 cut(s) | 610, 718, 1082, 1349, 1393 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 945 |
| Bsp19I | CCATGG | 1 cut(s) | 743 |
| BspACI | CCGC | 7 cut(s) | 570, 891, 926, 1047, 1125, 1127, 1145 |
| BspANI | GGCC | 4 cut(s) | 1042, 1311, 1332, 1409 |
| BspCNI | CTCAG | 3 cut(s) | 238, 958, 1057 |
| BspFNI | CGCG | 1 cut(s) | 1127 |
| BspHI | TCATGA | 1 cut(s) | 961 |
| BspLI | GGNNCC | 9 cut(s) | 9, 592, 924, 1084, 1102, 1103, 1120, 1198, 1351 |
| BspMAI | CTGCAG | 1 cut(s) | 178 |
| BspMI | ACCTGC | 1 cut(s) | 181 |
| BspPI | GGATC | 5 cut(s) | 1077, 1090, 1344, 1357, 1401 |
| BspQI | GCTCTTC | 1 cut(s) | 331 |
| BspT107I | GGYRCC | 3 cut(s) | 7, 590, 1196 |
| BsrDI | GCAATG | 2 cut(s) | 186, 874 |
| BsrFI | RCCGGY | 1 cut(s) | 778 |
| BsrI | ACTGG | 2 cut(s) | 712, 1442 |
| BssAI | RCCGGY | 1 cut(s) | 778 |
| BssECI | CCNNGG | 5 cut(s) | 730, 743, 1104, 1125, 1140 |
| BssMI | GATC | 5 cut(s) | 610, 718, 1082, 1349, 1393 |
| BssNI | GRCGYC | 1 cut(s) | 8 |
| BssT1I | CCWWGG | 1 cut(s) | 743 |
| Bst2UI | CCWGG | 3 cut(s) | 462, 731, 1106 |
| Bst4CI | ACNGT | 3 cut(s) | 304, 862, 1186 |
| Bst6I | CTCTTC | 4 cut(s) | 331, 992, 1047, 1506 |
| BstACI | GRCGYC | 1 cut(s) | 8 |
| BstBAI | YACGTR | 1 cut(s) | 1420 |
| BstC8I | GCNNGC | 2 cut(s) | 223, 1129 |
| BstDEI | CTNAG | 5 cut(s) | 246, 508, 935, 945, 1065 |
| BstDSI | CCRYGG | 2 cut(s) | 743, 1125 |
| BstF5I | GGATG | 1 cut(s) | 605 |
| BstFNI | CGCG | 1 cut(s) | 1127 |
| BstH2I | RGCGCY | 1 cut(s) | 11 |
| BstHHI | GCGC | 3 cut(s) | 10, 150, 1251 |
| BstKTI | GATC | 5 cut(s) | 613, 721, 1085, 1352, 1396 |
| BstMAI | GTCTC | 1 cut(s) | 1495 |
| BstMBI | GATC | 5 cut(s) | 610, 718, 1082, 1349, 1393 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 748 |
| BstNI | CCWGG | 3 cut(s) | 462, 731, 1106 |
| BstNSI | RCATGY | 3 cut(s) | 225, 727, 1482 |
| BstSCI | CCNGG | 3 cut(s) | 460, 729, 1104 |
| BstSFI | CTRYAG | 1 cut(s) | 174 |
| BstSLI | GKGCMC | 1 cut(s) | 595 |
| BstUI | CGCG | 1 cut(s) | 1127 |
| BstV1I | GCAGC | 3 cut(s) | 132, 188, 532 |
| BstX2I | RGATCY | 2 cut(s) | 1082, 1349 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 534 |
| BstYI | RGATCY | 2 cut(s) | 1082, 1349 |
| BsuI | GTATCC | 1 cut(s) | 1272 |
| BsuRI | GGCC | 4 cut(s) | 1042, 1311, 1332, 1409 |
| BtgI | CCRYGG | 2 cut(s) | 743, 1125 |
| BtgZI | GCGATG | 1 cut(s) | 925 |
| BtsCI | GGATG | 1 cut(s) | 605 |
| BtsI | GCAGTG | 3 cut(s) | 976, 987, 1037 |
| BtsIMutI | CAGTG | 8 cut(s) | 500, 769, 798, 976, 987, 1037, 1062, 1438 |
| BveI | ACCTGC | 1 cut(s) | 181 |
| Cac8I | GCNNGC | 2 cut(s) | 223, 1129 |
| CciI | TCATGA | 1 cut(s) | 961 |
| CfoI | GCGC | 3 cut(s) | 10, 150, 1251 |
| Cfr10I | RCCGGY | 1 cut(s) | 778 |
| Cfr13I | GGNCC | 4 cut(s) | 1101, 1119, 1137, 1214 |
| Cfr42I | CCGCGG | 1 cut(s) | 1128 |
| Csp6I | GTAC | 3 cut(s) | 633, 658, 1233 |
| CviQI | GTAC | 3 cut(s) | 633, 658, 1233 |
| DdeI | CTNAG | 5 cut(s) | 246, 508, 935, 945, 1065 |
| DinI | GGCGCC | 1 cut(s) | 9 |
| DpnI | GATC | 5 cut(s) | 612, 720, 1084, 1351, 1395 |
| DpnII | GATC | 5 cut(s) | 610, 718, 1082, 1349, 1393 |
| DraI | TTTAAA | 1 cut(s) | 78 |
| EaeI | YGGCCR | 3 cut(s) | 1309, 1330, 1407 |
| Eam1104I | CTCTTC | 4 cut(s) | 331, 992, 1047, 1506 |
| EarI | CTCTTC | 4 cut(s) | 331, 992, 1047, 1506 |
| Eco130I | CCWWGG | 1 cut(s) | 743 |
| Eco32I | GATATC | 1 cut(s) | 1358 |
| Eco47I | GGWCC | 4 cut(s) | 1101, 1119, 1137, 1214 |
| Eco57I | CTGAAG | 2 cut(s) | 745, 822 |
| Eco72I | CACGTG | 1 cut(s) | 1420 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1101, 1119, 1137 |
| EcoRII | CCWGG | 3 cut(s) | 460, 729, 1104 |
| EcoRV | GATATC | 1 cut(s) | 1358 |
| EcoT14I | CCWWGG | 1 cut(s) | 743 |
| EcoT22I | ATGCAT | 1 cut(s) | 607 |
| EgeI | GGCGCC | 1 cut(s) | 9 |
| EheI | GGCGCC | 1 cut(s) | 9 |
| ErhI | CCWWGG | 1 cut(s) | 743 |
| Esp3I | CGTCTC | 1 cut(s) | 1495 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 491, 523, 1143, 1175 |
| FaqI | GGGAC | 1 cut(s) | 1087 |
| FauI | CCCGC | 3 cut(s) | 1054, 1120, 1138 |
| Fnu4HI | GCNGC | 3 cut(s) | 146, 177, 521 |
| FokI | GGATG | 1 cut(s) | 592 |
| Fsp4HI | GCNGC | 3 cut(s) | 146, 177, 521 |
| FspI | TGCGCA | 1 cut(s) | 149 |
| GlaI | GCGC | 3 cut(s) | 9, 149, 1250 |
| GluI | GCNGC | 3 cut(s) | 146, 177, 521 |
| GsuI | CTGGAG | 3 cut(s) | 347, 695, 1477 |
| HaeII | RGCGCY | 1 cut(s) | 11 |
| HaeIII | GGCC | 4 cut(s) | 1042, 1311, 1332, 1409 |
| HapII | CCGG | 1 cut(s) | 779 |
| HhaI | GCGC | 3 cut(s) | 10, 150, 1251 |
| Hin1I | GRCGYC | 1 cut(s) | 8 |
| Hin6I | GCGC | 3 cut(s) | 8, 148, 1249 |
| HinP1I | GCGC | 3 cut(s) | 8, 148, 1249 |
| HinfI | GANTC | 4 cut(s) | 184, 504, 705, 834 |
| HpaII | CCGG | 1 cut(s) | 779 |
| HphI | GGTGA | 1 cut(s) | 1033 |
| Hpy166II | GTNNAC | 1 cut(s) | 1062 |
| Hpy188I | TCNGA | 5 cut(s) | 93, 106, 610, 695, 718 |
| Hpy188III | TCNNGA | 4 cut(s) | 71, 209, 962, 1353 |
| Hpy8I | GTNNAC | 1 cut(s) | 1062 |
| Hpy99I | CGWCG | 2 cut(s) | 198, 873 |
| HpyAV | CCTTC | 6 cut(s) | 646, 1073, 1091, 1109, 1145, 1239 |
| HpyCH4III | ACNGT | 3 cut(s) | 304, 862, 1186 |
| HpyCH4IV | ACGT | 3 cut(s) | 1207, 1274, 1419 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 748 |
| HpyF3I | CTNAG | 5 cut(s) | 246, 508, 935, 945, 1065 |
| HpySE526I | ACGT | 3 cut(s) | 1207, 1274, 1419 |
| Hsp92I | GRCGYC | 1 cut(s) | 8 |
| HspAI | GCGC | 3 cut(s) | 8, 148, 1249 |
| KasI | GGCGCC | 1 cut(s) | 7 |
| KflI | GGGWCCC | 1 cut(s) | 1101 |
| KspI | CCGCGG | 1 cut(s) | 1128 |
| Kzo9I | GATC | 5 cut(s) | 610, 718, 1082, 1349, 1393 |
| LguI | GCTCTTC | 1 cut(s) | 331 |
| Lsp1109I | GCAGC | 3 cut(s) | 132, 188, 532 |
| LweI | GCATC | 7 cut(s) | 265, 592, 614, 888, 948, 1367, 1437 |
| MaeII | ACGT | 3 cut(s) | 1207, 1274, 1419 |
| MaeIII | GTNAC | 5 cut(s) | 266, 453, 578, 1021, 1433 |
| MalI | GATC | 5 cut(s) | 612, 720, 1084, 1351, 1395 |
| MboI | GATC | 5 cut(s) | 610, 718, 1082, 1349, 1393 |
| MboII | GAAGA | 6 cut(s) | 318, 1009, 1064, 1164, 1254, 1523 |
| MflI | RGATCY | 2 cut(s) | 1082, 1349 |
| MhlI | GDGCHC | 1 cut(s) | 595 |
| MlsI | TGGCCA | 2 cut(s) | 1332, 1409 |
| MluCI | AATT | 8 cut(s) | 212, 355, 471, 532, 913, 952, 1255, 1264 |
| MluNI | TGGCCA | 2 cut(s) | 1332, 1409 |
| Mly113I | GGCGCC | 1 cut(s) | 8 |
| MlyI | GAGTC | 1 cut(s) | 843 |
| MmeI | TCCRAC | 1 cut(s) | 1241 |
| Mox20I | TGGCCA | 2 cut(s) | 1332, 1409 |
| Mph1103I | ATGCAT | 1 cut(s) | 607 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1155 |
| MscI | TGGCCA | 2 cut(s) | 1332, 1409 |
| MseI | TTAA | 3 cut(s) | 77, 131, 1531 |
| MslI | CAYNNNNRTG | 1 cut(s) | 600 |
| Msp20I | TGGCCA | 2 cut(s) | 1332, 1409 |
| MspA1I | CMGCKG | 2 cut(s) | 367, 1127 |
| MspI | CCGG | 1 cut(s) | 779 |
| MspR9I | CCNGG | 3 cut(s) | 462, 731, 1106 |
| MvaI | CCWGG | 3 cut(s) | 462, 731, 1106 |
| MvnI | CGCG | 1 cut(s) | 1127 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 748 |
| NarI | GGCGCC | 1 cut(s) | 8 |
| NcoI | CCATGG | 1 cut(s) | 743 |
| NdeII | GATC | 5 cut(s) | 610, 718, 1082, 1349, 1393 |
| NlaIV | GGNNCC | 9 cut(s) | 9, 592, 924, 1084, 1102, 1103, 1120, 1198, 1351 |
| NmeAIII | GCCGAG | 1 cut(s) | 1121 |
| NmuCI | GTSAC | 3 cut(s) | 453, 1021, 1433 |
| NsbI | TGCGCA | 1 cut(s) | 149 |
| NsiI | ATGCAT | 1 cut(s) | 607 |
| NspI | RCATGY | 3 cut(s) | 225, 727, 1482 |
| PaeI | GCATGC | 1 cut(s) | 225 |
| PagI | TCATGA | 1 cut(s) | 961 |
| PciI | ACATGT | 1 cut(s) | 723 |
| PciSI | GCTCTTC | 1 cut(s) | 331 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 193 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1155 |
| PfeI | GAWTC | 3 cut(s) | 184, 504, 705 |
| PflFI | GACNNNGTC | 1 cut(s) | 192 |
| PfoI | TCCNGGA | 1 cut(s) | 460 |
| PkrI | GCNGC | 3 cut(s) | 147, 178, 522 |
| PleI | GAGTC | 1 cut(s) | 842 |
| PluTI | GGCGCC | 1 cut(s) | 11 |
| PmaCI | CACGTG | 1 cut(s) | 1420 |
| PmlI | CACGTG | 1 cut(s) | 1420 |
| PpsI | GAGTC | 1 cut(s) | 842 |
| Ppu21I | YACGTR | 1 cut(s) | 1420 |
| PpuMI | RGGWCCY | 3 cut(s) | 1101, 1119, 1137 |
| PscI | ACATGT | 1 cut(s) | 723 |
| Psp5II | RGGWCCY | 3 cut(s) | 1101, 1119, 1137 |
| Psp6I | CCWGG | 3 cut(s) | 460, 729, 1104 |
| PspCI | CACGTG | 1 cut(s) | 1420 |
| PspGI | CCWGG | 3 cut(s) | 460, 729, 1104 |
| PspN4I | GGNNCC | 9 cut(s) | 9, 592, 924, 1084, 1102, 1103, 1120, 1198, 1351 |
| PspPI | GGNCC | 4 cut(s) | 1101, 1119, 1137, 1214 |
| PspPPI | RGGWCCY | 3 cut(s) | 1101, 1119, 1137 |
| PstI | CTGCAG | 1 cut(s) | 178 |
| PsuI | RGATCY | 2 cut(s) | 1082, 1349 |
| PsyI | GACNNNGTC | 1 cut(s) | 192 |
| PvuII | CAGCTG | 1 cut(s) | 367 |
| RsaI | GTAC | 3 cut(s) | 634, 659, 1234 |
| RsaNI | GTAC | 3 cut(s) | 633, 658, 1233 |
| RseI | CAYNNNNRTG | 1 cut(s) | 600 |
| SacII | CCGCGG | 1 cut(s) | 1128 |
| SapI | GCTCTTC | 1 cut(s) | 331 |
| SaqAI | TTAA | 3 cut(s) | 77, 131, 1531 |
| SatI | GCNGC | 3 cut(s) | 146, 177, 521 |
| Sau3AI | GATC | 5 cut(s) | 610, 718, 1082, 1349, 1393 |
| Sau96I | GGNCC | 4 cut(s) | 1101, 1119, 1137, 1214 |
| SchI | GAGTC | 1 cut(s) | 843 |
| ScrFI | CCNGG | 3 cut(s) | 462, 731, 1106 |
| SduI | GDGCHC | 1 cut(s) | 595 |
| SfaNI | GCATC | 7 cut(s) | 265, 592, 614, 888, 948, 1367, 1437 |
| SfcI | CTRYAG | 1 cut(s) | 174 |
| SfoI | GGCGCC | 1 cut(s) | 9 |
| Sfr303I | CCGCGG | 1 cut(s) | 1128 |
| SgrBI | CCGCGG | 1 cut(s) | 1128 |
| SinI | GGWCC | 4 cut(s) | 1101, 1119, 1137, 1214 |
| SmiI | ATTTAAAT | 1 cut(s) | 78 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 600 |
| SphI | GCATGC | 1 cut(s) | 225 |
| Sse9I | AATT | 8 cut(s) | 212, 355, 471, 532, 913, 952, 1255, 1264 |
| SsiI | CCGC | 7 cut(s) | 570, 891, 926, 1047, 1125, 1127, 1145 |
| SspDI | GGCGCC | 1 cut(s) | 7 |
| StyD4I | CCNGG | 3 cut(s) | 460, 729, 1104 |
| StyI | CCWWGG | 1 cut(s) | 743 |
| SwaI | ATTTAAAT | 1 cut(s) | 78 |
| TaaI | ACNGT | 3 cut(s) | 304, 862, 1186 |
| TaiI | ACGT | 3 cut(s) | 1210, 1277, 1422 |
| TaqI | TCGA | 2 cut(s) | 187, 1387 |
| TasI | AATT | 8 cut(s) | 212, 355, 471, 532, 913, 952, 1255, 1264 |
| TatI | WGTACW | 1 cut(s) | 657 |
| TfiI | GAWTC | 3 cut(s) | 184, 504, 705 |
| Tru1I | TTAA | 3 cut(s) | 77, 131, 1531 |
| Tru9I | TTAA | 3 cut(s) | 77, 131, 1531 |
| TscAI | CASTG | 8 cut(s) | 500, 769, 805, 976, 994, 1037, 1069, 1438 |
| TseFI | GTSAC | 3 cut(s) | 453, 1021, 1433 |
| TseI | GCWGC | 3 cut(s) | 145, 176, 520 |
| Tsp45I | GTSAC | 3 cut(s) | 453, 1021, 1433 |
| TspDTI | ATGAA | 7 cut(s) | 6, 197, 243, 662, 801, 896, 1218 |
| TspRI | CASTG | 8 cut(s) | 500, 769, 805, 976, 994, 1037, 1069, 1438 |
| Tth111I | GACNNNGTC | 1 cut(s) | 192 |
| VpaK11BI | GGWCC | 4 cut(s) | 1101, 1119, 1137, 1214 |
| XapI | RAATTY | 3 cut(s) | 471, 1255, 1264 |
| XceI | RCATGY | 3 cut(s) | 225, 727, 1482 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1155 |
| Zsp2I | ATGCAT | 1 cut(s) | 607 |