Rmu_sc0003385.1_g000013

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003385.1
Physical Location & Seq
Forward (+)
51706 .. 54621
2916 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003385.1_g000013.1.cds

Sequence Viewer

Length: 2130 bp
atggccggtgcttcttcatcgtctggaggcagattcaaatacgacgttttcatcaatttcagaggcgaagacacacgtaggtgtttcgtctgccatctttaccaagctctgaaacagagagcactcgaccccttcatagattcggaagagcttagaaaaggcgacgacctttcggagctattcaaagccattcaagactcgagcctttcgattgtagttttctctaaagactacgcatcatctaaatggtgcttaaaagaactggtccagatcttggagtgcatggataggcagaggcagattgtggtgcccattttctatgaagtagatccctcccatattcgcaaccttgaggaaagttttgcagaagcttttgcaaaacatgaaagcaattccaaaatcgacaaaaaagagttggaaagctggaagtccagtttaaccagagccaccaatttatctggctaccactccagaaattatcgggatgatacccagcttatcggcagcattgtagaagacattttagagaagttgatccgcatctcaccaagtgaaaccgatggcttgattggaatggattatcacatggatgaaattgatttgctattacagctgtgggtggatgattttcgcattgttggaatctggggcatgggcggcatcggcaagtcaaccatagctaatgctgtttttgacagaattgctcatcaatttgaacacaagtgctttcttgataatgtaaaggagggcttcatcacaaaaaatggtgcagtacaaatggttgaaaaacttctatccaaaattctgaaggtaaaggatcgaagcactttggatggagggctgaatatgattagggaaagactaggtaagaaaaaaattcttcttgttcttgatgatgtggatagtctgcaccaaattgaaaccttgattggagagaaacctacatttggtcatgggagcagaatcattataacaactagagataaaaaattactagctggatttttgatatacaagccccagttgttcactaatgtagaagcttttgaactctttagcaaatatgctttcagaacaaacaaaccctcagagagttacgatgctatctcaaggcgtgcagtaaaatacgcctatggtcttcctttggcactcaaagtcttgggagctttgcttgataacagaactgtacaggagtgggaatctgagttggagaagatagagaaaatcccaatcacgtttcttgataataagattggacgtgtgctttgggcaagctatgatggattggatgaatgtcagaagaacatatttctagatattgcatgtttctttaagacaaaggacaaagatattgtaacaaagtttcatgaaagttgtggctttttcccccagaatggactaagagttttggaagaaagatctcttataagtgtctcatattttggtaaactagagatgcatgatttgatacaggaagtgggtagggacatcgtccaccgacaatctactgaagatccgggaatgcgtagtagattatggggttatgaagatgttcaccaagtgttagctcaaaatacggctacgaaagttgaaggcataattctagacttgtcaaagttcaaagaggtatacgtaaatgatgaagtttttgttagcatgaggagactaaggctactccagctttatgaatattattatgaagatgaatatgaatatgattatggaagtgcaaggaatgaatatgattatgaaagtgaatcgagacctgcagattatgaaccttgtgtacagaaagtgagtgagaacttaaagtttctttctcaagagttgagatttcttgtgtggcatggatgcccactaaagtctttcccaattaattttctaccaaagaatcttatttatgttgacatgtgctatagtcgtattgaacaactttgggaaggaaccaggcctttgcaagacttggtacacatcgatttaagatactcaaagtatctaatcaaaaccctcgatttcactggggcaacaaatcttaagaaattgaagcttaaaggatgtacaagtttattggaggttcacccatccatttcagctcttaaaagcctccattaccaggagatacctgaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

709

Amino Acids

82.03

Weight (kDa)

5.89

Isoelectric Point (pI)

41.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 971, 1427
Acc36I ACCTGC 1 cut(s) 1774
AccB1I GGYRCC 1 cut(s) 307
AccB7I CCANNNNNTGG 1 cut(s) 274
AccI GTMKAC 1 cut(s) 1629
AciI CCGC 2 cut(s) 538, 657
AclWI GGATC 4 cut(s) 323, 529, 825, 1508
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 801, 876
AcuI CTGAAG 2 cut(s) 827, 1530
AdeI CACNNNGTG 2 cut(s) 551, 1561
AfaI GTAC 5 cut(s) 774, 1188, 1788, 1968, 2059
AfiI CCNNNNNNNGG 4 cut(s) 274, 947, 1394, 2113
AflII CTTAAG 1 cut(s) 2033
AflIII ACRYGT 3 cut(s) 74, 1258, 1908
AjiI CACGTC 1 cut(s) 1259
AjnI CCWGG 2 cut(s) 1946, 2112
AjuI GAANNNNNNNTTGG 2 cut(s) 912, 944
AleI CACNNNNGTG 1 cut(s) 79
Alw21I GWGCWC 1 cut(s) 124
Alw26I GTCTC 3 cut(s) 1438, 1657, 1756
AlwI GGATC 4 cut(s) 323, 529, 825, 1508
Ama87I CYCGRG 1 cut(s) 199
AoxI GGCC 2 cut(s) 3, 1949
ApeKI GCWGC 1 cut(s) 504
ApoI RAATTY 2 cut(s) 801, 876
ArsI GACNNNNNNTTYG 2 cut(s) 1248, 1280
AseI ATTAAT 1 cut(s) 1875
Asp700I GAANNNNTTC 2 cut(s) 789, 1551
AspS9I GGNCC 1 cut(s) 265
AsuC2I CCSGG 1 cut(s) 1518
AsuHPI GGTGA 3 cut(s) 537, 1547, 2069
AvaI CYCGRG 1 cut(s) 199
AvaII GGWCC 1 cut(s) 265
BaeGI GKGCMC 1 cut(s) 312
BanI GGYRCC 1 cut(s) 307
BbsI GAAGAC 3 cut(s) 75, 522, 1130
Bbv12I GWGCWC 1 cut(s) 124
BbvI GCAGC 1 cut(s) 516
BccI CCATC 5 cut(s) 102, 554, 827, 1274, 2089
BceAI ACGGC 1 cut(s) 1593
BciT130I CCWGG 2 cut(s) 1948, 2114
BcnI CCSGG 1 cut(s) 1518
BcoDI GTCTC 3 cut(s) 1438, 1657, 1756
BfaI CTAG 6 cut(s) 863, 978, 995, 1313, 1451, 1604
BfmI CTRYAG 2 cut(s) 1767, 1915
BfrI CTTAAG 1 cut(s) 2033
BfuAI ACCTGC 1 cut(s) 1774
BglII AGATCT 2 cut(s) 270, 1418
BisI GCNGC 2 cut(s) 505, 658
BlsI GCNGC 2 cut(s) 506, 659
Bme1390I CCNGG 3 cut(s) 1518, 1948, 2114
Bme18I GGWCC 1 cut(s) 265
BmeT110I CYCGRG 1 cut(s) 199
BmgBI CACGTC 1 cut(s) 1259
BmgT120I GGNCC 1 cut(s) 265
BmiI GGNNCC 2 cut(s) 309, 1945
BmrFI CCNGG 3 cut(s) 1518, 1948, 2114
BmrI ACTGGG 2 cut(s) 1015, 2028
BmsI GCATC 6 cut(s) 245, 549, 669, 1090, 1446, 1841
BmuI ACTGGG 2 cut(s) 1015, 2028
BpiI GAAGAC 3 cut(s) 75, 522, 1130
BpmI CTGGAG 3 cut(s) 45, 454, 1661
BpuEI CTTGAG 3 cut(s) 371, 1093, 1806
BpuMI CCSGG 1 cut(s) 1518
Bsa29I ATCGAT 1 cut(s) 1974
BsaAI YACGTR 2 cut(s) 77, 1633
BsaBI GATNNNNATC 1 cut(s) 539
BsaI GGTCTC 1 cut(s) 1756
Bsc4I CCNNNNNNNGG 4 cut(s) 274, 947, 1394, 2113
Bse118I RCCGGY 1 cut(s) 5
Bse1I ACTGG 4 cut(s) 267, 432, 1021, 2023
Bse8I GATNNNNATC 1 cut(s) 539
BseBI CCWGG 2 cut(s) 1948, 2114
BseCI ATCGAT 1 cut(s) 1974
BseGI GGATG 8 cut(s) 490, 595, 628, 838, 1294, 1856, 2060, 2081
BseJI GATNNNNATC 1 cut(s) 539
BseLI CCNNNNNNNGG 4 cut(s) 274, 947, 1394, 2113
BseMII CTCAG 2 cut(s) 1101, 1194
BseNI ACTGG 4 cut(s) 267, 432, 1021, 2023
BseRI GAGGAG 1 cut(s) 1675
BseSI GKGCMC 1 cut(s) 312
BseXI GCAGC 1 cut(s) 516
BseYI CCCAGC 1 cut(s) 492
BsgI GTGCAG 3 cut(s) 789, 893, 1137
BshFI GGCC 2 cut(s) 5, 1951
BshNI GGYRCC 1 cut(s) 307
BshVI ATCGAT 1 cut(s) 1974
BsiHKAI GWGCWC 1 cut(s) 124
BsiHKCI CYCGRG 1 cut(s) 199
BsiSI CCGG 2 cut(s) 6, 1517
BslFI GGGAC 1 cut(s) 1499
BslI CCNNNNNNNGG 4 cut(s) 274, 947, 1394, 2113
BsmAI GTCTC 3 cut(s) 1438, 1657, 1756
BsmFI GGGAC 1 cut(s) 1499
BsmI GAATGC 1 cut(s) 1527
BsnI GGCC 2 cut(s) 5, 1951
Bso31I GGTCTC 1 cut(s) 1756
BsoBI CYCGRG 1 cut(s) 199
Bsp1286I GDGCHC 2 cut(s) 124, 312
Bsp1407I TGTACA 3 cut(s) 1186, 1786, 2057
Bsp143I GATC 6 cut(s) 270, 328, 534, 817, 1418, 1513
BspACI CCGC 2 cut(s) 538, 657
BspANI GGCC 2 cut(s) 5, 1951
BspCNI CTCAG 2 cut(s) 1100, 1195
BspDI ATCGAT 1 cut(s) 1974
BspHI TCATGA 1 cut(s) 1366
BspLI GGNNCC 2 cut(s) 309, 1945
BspMAI CTGCAG 1 cut(s) 1771
BspMI ACCTGC 1 cut(s) 1774
BspPI GGATC 4 cut(s) 323, 529, 825, 1508
BspQI GCTCTTC 1 cut(s) 141
BspT107I GGYRCC 1 cut(s) 307
BspTI CTTAAG 1 cut(s) 2033
BspTNI GGTCTC 1 cut(s) 1756
BsrFI RCCGGY 1 cut(s) 5
BsrGI TGTACA 3 cut(s) 1186, 1786, 2057
BsrI ACTGG 4 cut(s) 267, 432, 1021, 2023
BssAI RCCGGY 1 cut(s) 5
BssMI GATC 6 cut(s) 270, 328, 534, 817, 1418, 1513
BssNAI GTATAC 1 cut(s) 1630
Bst1107I GTATAC 1 cut(s) 1630
Bst2UI CCWGG 2 cut(s) 1948, 2114
Bst4CI ACNGT 1 cut(s) 1186
Bst6I CTCTTC 1 cut(s) 141
BstAFI CTTAAG 1 cut(s) 2033
BstAUI TGTACA 3 cut(s) 1186, 1786, 2057
BstBAI YACGTR 2 cut(s) 77, 1633
BstC8I GCNNGC 2 cut(s) 1116, 1273
BstDEI CTNAG 5 cut(s) 152, 1087, 1203, 1400, 1667
BstF5I GGATG 8 cut(s) 490, 595, 628, 838, 1294, 1856, 2060, 2081
BstKTI GATC 6 cut(s) 273, 331, 537, 820, 1421, 1516
BstMAI GTCTC 3 cut(s) 1438, 1657, 1756
BstMBI GATC 6 cut(s) 270, 328, 534, 817, 1418, 1513
BstMWI GCNNNNNNNGC 4 cut(s) 610, 657, 663, 1678
BstNI CCWGG 2 cut(s) 1948, 2114
BstNSI RCATGY 2 cut(s) 1326, 1912
BstSCI CCNGG 3 cut(s) 1516, 1946, 2112
BstSFI CTRYAG 2 cut(s) 1767, 1915
BstSLI GKGCMC 1 cut(s) 312
BstSNI TACGTA 1 cut(s) 1633
BstV1I GCAGC 1 cut(s) 516
BstV2I GAAGAC 3 cut(s) 75, 522, 1130
BstX2I RGATCY 4 cut(s) 270, 328, 1418, 1513
BstYI RGATCY 4 cut(s) 270, 328, 1418, 1513
BstZ17I GTATAC 1 cut(s) 1630
Bsu15I ATCGAT 1 cut(s) 1974
BsuRI GGCC 2 cut(s) 5, 1951
BsuTUI ATCGAT 1 cut(s) 1974
BtrI CACGTC 1 cut(s) 1259
BtsCI GGATG 8 cut(s) 490, 595, 628, 838, 1294, 1856, 2060, 2081
BtsIMutI CAGTG 1 cut(s) 2016
BveI ACCTGC 1 cut(s) 1774
Cac8I GCNNGC 2 cut(s) 1116, 1273
CciI TCATGA 1 cut(s) 1366
Cfr10I RCCGGY 1 cut(s) 5
Cfr13I GGNCC 1 cut(s) 265
ClaI ATCGAT 1 cut(s) 1974
Csp6I GTAC 5 cut(s) 773, 1187, 1787, 1967, 2058
CviQI GTAC 5 cut(s) 773, 1187, 1787, 1967, 2058
DdeI CTNAG 5 cut(s) 152, 1087, 1203, 1400, 1667
DpnI GATC 6 cut(s) 272, 330, 536, 819, 1420, 1515
DpnII GATC 6 cut(s) 270, 328, 534, 817, 1418, 1513
DraIII CACNNNGTG 2 cut(s) 551, 1561
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 141
EarI CTCTTC 1 cut(s) 141
Eco105I TACGTA 1 cut(s) 1633
Eco147I AGGCCT 1 cut(s) 1951
Eco31I GGTCTC 1 cut(s) 1756
Eco47I GGWCC 1 cut(s) 265
Eco57I CTGAAG 2 cut(s) 827, 1530
Eco88I CYCGRG 1 cut(s) 199
EcoRII CCWGG 2 cut(s) 1946, 2112
EcoT22I ATGCAT 1 cut(s) 1461
FalI AAGNNNNNCTT 2 cut(s) 734, 766
FaqI GGGAC 1 cut(s) 1499
FblI GTMKAC 1 cut(s) 1629
Fnu4HI GCNGC 2 cut(s) 505, 658
FokI GGATG 8 cut(s) 497, 602, 635, 845, 1301, 1863, 2067, 2068
Fsp4HI GCNGC 2 cut(s) 505, 658
FspBI CTAG 6 cut(s) 863, 978, 995, 1313, 1451, 1604
GluI GCNGC 2 cut(s) 505, 658
GsaI CCCAGC 1 cut(s) 496
GsuI CTGGAG 3 cut(s) 45, 454, 1661
HaeIII GGCC 2 cut(s) 5, 1951
HapII CCGG 2 cut(s) 6, 1517
HincII GTYRAC 2 cut(s) 672, 1906
HindII GTYRAC 2 cut(s) 672, 1906
HindIII AAGCTT 3 cut(s) 369, 1041, 2045
HinfI GANTC 8 cut(s) 33, 140, 197, 642, 963, 1199, 1757, 1891
HpaII CCGG 2 cut(s) 6, 1517
HphI GGTGA 3 cut(s) 537, 1547, 2069
Hpy188I TCNGA 9 cut(s) 62, 111, 145, 175, 807, 1073, 1090, 1204, 1299
Hpy99I CGWCG 2 cut(s) 47, 167
HpyAV CCTTC 4 cut(s) 142, 802, 1586, 1934
HpyCH4III ACNGT 1 cut(s) 1186
HpyCH4IV ACGT 5 cut(s) 45, 76, 1235, 1258, 1632
HpyF10VI GCNNNNNNNGC 4 cut(s) 610, 657, 663, 1678
HpyF3I CTNAG 5 cut(s) 152, 1087, 1203, 1400, 1667
HpySE526I ACGT 5 cut(s) 45, 76, 1235, 1258, 1632
Kzo9I GATC 6 cut(s) 270, 328, 534, 817, 1418, 1513
LguI GCTCTTC 1 cut(s) 141
LmnI GCTCC 3 cut(s) 175, 957, 1163
Lsp1109I GCAGC 1 cut(s) 516
LweI GCATC 6 cut(s) 245, 549, 669, 1090, 1446, 1841
MaeI CTAG 6 cut(s) 863, 978, 995, 1313, 1451, 1604
MaeII ACGT 5 cut(s) 45, 76, 1235, 1258, 1632
MaeIII GTNAC 2 cut(s) 1094, 1354
MalI GATC 6 cut(s) 272, 330, 536, 819, 1420, 1515
MboI GATC 6 cut(s) 270, 328, 534, 817, 1418, 1513
MflI RGATCY 4 cut(s) 270, 328, 1418, 1513
MhlI GDGCHC 2 cut(s) 124, 312
MlyI GAGTC 1 cut(s) 191
MmeI TCCRAC 3 cut(s) 396, 619, 1188
Mph1103I ATGCAT 1 cut(s) 1461
MroXI GAANNNNTTC 2 cut(s) 789, 1551
MseI TTAA 9 cut(s) 254, 437, 1332, 1808, 1875, 1979, 2034, 2049, 2097
MslI CAYNNNNRTG 3 cut(s) 79, 244, 588
MspA1I CMGCKG 1 cut(s) 613
MspCI CTTAAG 1 cut(s) 2033
MspI CCGG 2 cut(s) 6, 1517
MspR9I CCNGG 3 cut(s) 1518, 1948, 2114
Mva1269I GAATGC 1 cut(s) 1527
MvaI CCWGG 2 cut(s) 1948, 2114
MwoI GCNNNNNNNGC 4 cut(s) 610, 657, 663, 1678
NciI CCSGG 1 cut(s) 1518
NdeII GATC 6 cut(s) 270, 328, 534, 817, 1418, 1513
NlaIV GGNNCC 2 cut(s) 309, 1945
NsiI ATGCAT 1 cut(s) 1461
NspI RCATGY 2 cut(s) 1326, 1912
OliI CACNNNNGTG 1 cut(s) 79
PaeR7I CTCGAG 1 cut(s) 199
PagI TCATGA 1 cut(s) 1366
PceI AGGCCT 1 cut(s) 1951
PciI ACATGT 1 cut(s) 1908
PciSI GCTCTTC 1 cut(s) 141
PcsI WCGNNNNNNNCGW 1 cut(s) 206
PctI GAATGC 1 cut(s) 1527
PdmI GAANNNNTTC 2 cut(s) 789, 1551
PfeI GAWTC 7 cut(s) 33, 140, 642, 963, 1199, 1757, 1891
PflFI GACNNNGTC 1 cut(s) 1490
PflMI CCANNNNNTGG 1 cut(s) 274
PfoI TCCNGGA 1 cut(s) 1516
PkrI GCNGC 2 cut(s) 506, 659
PleI GAGTC 1 cut(s) 191
PpsI GAGTC 1 cut(s) 191
Ppu21I YACGTR 2 cut(s) 77, 1633
PscI ACATGT 1 cut(s) 1908
PshBI ATTAAT 1 cut(s) 1875
PsiI TTATAA 2 cut(s) 971, 1427
Psp6I CCWGG 2 cut(s) 1946, 2112
PspFI CCCAGC 1 cut(s) 492
PspGI CCWGG 2 cut(s) 1946, 2112
PspN4I GGNNCC 2 cut(s) 309, 1945
PspPI GGNCC 1 cut(s) 265
PspXI VCTCGAGB 1 cut(s) 199
PsrI GAACNNNNNNTAC 2 cut(s) 1770, 1802
PstI CTGCAG 1 cut(s) 1771
PsuI RGATCY 4 cut(s) 270, 328, 1418, 1513
PsyI GACNNNGTC 1 cut(s) 1490
PvuII CAGCTG 1 cut(s) 613
RsaI GTAC 5 cut(s) 774, 1188, 1788, 1968, 2059
RsaNI GTAC 5 cut(s) 773, 1187, 1787, 1967, 2058
RseI CAYNNNNRTG 3 cut(s) 79, 244, 588
SapI GCTCTTC 1 cut(s) 141
SaqAI TTAA 9 cut(s) 254, 437, 1332, 1808, 1875, 1979, 2034, 2049, 2097
SatI GCNGC 2 cut(s) 505, 658
Sau3AI GATC 6 cut(s) 270, 328, 534, 817, 1418, 1513
Sau96I GGNCC 1 cut(s) 265
SchI GAGTC 1 cut(s) 191
ScrFI CCNGG 3 cut(s) 1518, 1948, 2114
SduI GDGCHC 2 cut(s) 124, 312
SfaNI GCATC 6 cut(s) 245, 549, 669, 1090, 1446, 1841
SfcI CTRYAG 2 cut(s) 1767, 1915
Sfr274I CTCGAG 1 cut(s) 199
SinI GGWCC 1 cut(s) 265
SlaI CTCGAG 1 cut(s) 199
SmiMI CAYNNNNRTG 3 cut(s) 79, 244, 588
SmlI CTYRAG 5 cut(s) 199, 350, 1108, 1821, 2033
SmoI CTYRAG 5 cut(s) 199, 350, 1108, 1821, 2033
SnaBI TACGTA 1 cut(s) 1633
SseBI AGGCCT 1 cut(s) 1951
SsiI CCGC 2 cut(s) 538, 657
SspI AATATT 1 cut(s) 1691
SspMI CTAG 6 cut(s) 863, 978, 995, 1313, 1451, 1604
StuI AGGCCT 1 cut(s) 1951
StyD4I CCNGG 3 cut(s) 1516, 1946, 2112
TaaI ACNGT 1 cut(s) 1186
TaiI ACGT 5 cut(s) 48, 79, 1238, 1261, 1635
TaqI TCGA 8 cut(s) 126, 200, 209, 402, 820, 1760, 1974, 2010
TatI WGTACW 4 cut(s) 772, 1186, 1786, 2057
TauI GCSGC 1 cut(s) 660
TfiI GAWTC 7 cut(s) 33, 140, 642, 963, 1199, 1757, 1891
Tru1I TTAA 9 cut(s) 254, 437, 1332, 1808, 1875, 1979, 2034, 2049, 2097
Tru9I TTAA 9 cut(s) 254, 437, 1332, 1808, 1875, 1979, 2034, 2049, 2097
TscAI CASTG 1 cut(s) 2023
TseI GCWGC 1 cut(s) 504
TspRI CASTG 1 cut(s) 2023
Tth111I GACNNNGTC 1 cut(s) 1490
Van91I CCANNNNNTGG 1 cut(s) 274
Vha464I CTTAAG 1 cut(s) 2033
VpaK11BI GGWCC 1 cut(s) 265
VspI ATTAAT 1 cut(s) 1875
XapI RAATTY 2 cut(s) 801, 876
XbaI TCTAGA 2 cut(s) 1312, 1603
XceI RCATGY 2 cut(s) 1326, 1912
XhoI CTCGAG 1 cut(s) 199
XmiI GTMKAC 1 cut(s) 1629
XmnI GAANNNNTTC 2 cut(s) 789, 1551
XspI CTAG 6 cut(s) 863, 978, 995, 1313, 1451, 1604
Zsp2I ATGCAT 1 cut(s) 1461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.