TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 8 - 171 | 2.4e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 240 - 309 | 8.3e-22 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_3 | PF07725 | 430 - 449 | 4.7e-07 | Leucine Rich Repeat |
| LRR_14 | PF23598 | 493 - 599 | 2e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 520 - 606 | 7.2e-12 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 587 - 653 | 1.7e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 608 - 768 | 1.7e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 674 - 734 | 2.7e-09 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 674 - 728 | 3.6e-06 | Leucine rich repeat |
| C-JID | PF20160 | 806 - 875 | 4.1e-18 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1113 |
| Acc16I | TGCGCA | 2 cut(s) | 245, 2108 |
| Acc36I | ACCTGC | 1 cut(s) | 2140 |
| AccB1I | GGYRCC | 1 cut(s) | 191 |
| AccI | GTMKAC | 3 cut(s) | 571, 619, 1462 |
| AccIII | TCCGGA | 1 cut(s) | 1756 |
| AciI | CCGC | 3 cut(s) | 384, 662, 916 |
| AclWI | GGATC | 8 cut(s) | 527, 704, 717, 984, 1305, 2457, 2470, 2685 |
| AcsI | RAATTY | 5 cut(s) | 672, 783, 1364, 1650, 1843 |
| AcuI | CTGAAG | 4 cut(s) | 487, 1086, 1437, 1688 |
| AcvI | CACGTG | 1 cut(s) | 1192 |
| AdeI | CACNNNGTG | 1 cut(s) | 428 |
| AfaI | GTAC | 6 cut(s) | 828, 1779, 1862, 2331, 2478, 2618 |
| AfeI | AGCGCT | 1 cut(s) | 1491 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 46, 89, 667, 815, 1756, 2326, 2493, 2674 |
| AflIII | ACRYGT | 2 cut(s) | 1189, 2162 |
| AhlI | ACTAGT | 1 cut(s) | 1438 |
| AjiI | CACGTC | 2 cut(s) | 973, 2165 |
| AjnI | CCWGG | 4 cut(s) | 82, 937, 2376, 2419 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 342, 374 |
| AleI | CACNNNNGTG | 2 cut(s) | 1194, 2379 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2669, 2701 |
| Alw21I | GWGCWC | 3 cut(s) | 844, 1811, 2288 |
| Alw26I | GTCTC | 5 cut(s) | 1572, 1607, 1658, 2182, 2418 |
| AlwI | GGATC | 8 cut(s) | 527, 704, 717, 984, 1305, 2457, 2470, 2685 |
| Aor13HI | TCCGGA | 1 cut(s) | 1756 |
| Aor51HI | AGCGCT | 1 cut(s) | 1491 |
| AoxI | GGCC | 2 cut(s) | 1279, 2017 |
| ApeKI | GCWGC | 4 cut(s) | 367, 1551, 1593, 2104 |
| ApoI | RAATTY | 5 cut(s) | 672, 783, 1364, 1650, 1843 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 213, 729, 1653, 1701 |
| AspLEI | GCGC | 4 cut(s) | 246, 948, 1492, 2109 |
| AspS9I | GGNCC | 3 cut(s) | 1280, 1639, 1980 |
| AsuHPI | GGTGA | 4 cut(s) | 56, 482, 2366, 2393 |
| AvaII | GGWCC | 2 cut(s) | 1639, 1980 |
| BamHI | GGATCC | 2 cut(s) | 709, 2462 |
| BanI | GGYRCC | 1 cut(s) | 191 |
| BanII | GRGCYC | 1 cut(s) | 844 |
| BauI | CACGAG | 1 cut(s) | 1218 |
| BbrPI | CACGTG | 1 cut(s) | 1192 |
| BbsI | GAAGAC | 2 cut(s) | 975, 1745 |
| Bbv12I | GWGCWC | 3 cut(s) | 844, 1811, 2288 |
| BbvI | GCAGC | 4 cut(s) | 379, 1563, 1580, 2091 |
| BccI | CCATC | 6 cut(s) | 461, 602, 1276, 1937, 2060, 2221 |
| BceAI | ACGGC | 3 cut(s) | 1014, 1715, 2139 |
| BciT130I | CCWGG | 4 cut(s) | 84, 939, 2378, 2421 |
| BclI | TGATCA | 1 cut(s) | 142 |
| BcoDI | GTCTC | 5 cut(s) | 1572, 1607, 1658, 2182, 2418 |
| BcuI | ACTAGT | 1 cut(s) | 1438 |
| BfaI | CTAG | 8 cut(s) | 108, 222, 251, 408, 600, 641, 734, 1439 |
| BfmI | CTRYAG | 3 cut(s) | 552, 1002, 1735 |
| BfoI | RGCGCY | 1 cut(s) | 1493 |
| BfuAI | ACCTGC | 1 cut(s) | 2140 |
| BglII | AGATCT | 1 cut(s) | 1789 |
| BisI | GCNGC | 4 cut(s) | 368, 1552, 1594, 2105 |
| BlsI | GCNGC | 4 cut(s) | 369, 1553, 1595, 2106 |
| BmcAI | AGTACT | 1 cut(s) | 828 |
| Bme1390I | CCNGG | 4 cut(s) | 84, 939, 2378, 2421 |
| Bme18I | GGWCC | 2 cut(s) | 1639, 1980 |
| BmgBI | CACGTC | 2 cut(s) | 973, 2165 |
| BmgT120I | GGNCC | 3 cut(s) | 1280, 1639, 1980 |
| BmiI | GGNNCC | 4 cut(s) | 193, 271, 711, 2464 |
| BmrFI | CCNGG | 4 cut(s) | 84, 939, 2378, 2421 |
| BmsI | GCATC | 5 cut(s) | 1051, 1238, 1514, 2224, 2573 |
| BpiI | GAAGAC | 2 cut(s) | 975, 1745 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1369, 1401, 1670, 1702 |
| BpuEI | CTTGAG | 6 cut(s) | 526, 549, 1246, 1556, 1582, 2654 |
| BsaAI | YACGTR | 3 cut(s) | 623, 833, 1192 |
| BsaJI | CCNNGG | 4 cut(s) | 40, 938, 2377, 2702 |
| BsaWI | WCCGGW | 1 cut(s) | 1756 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 46, 89, 667, 815, 1756, 2326, 2493, 2674 |
| Bse1I | ACTGG | 2 cut(s) | 711, 2331 |
| Bse3DI | GCAATG | 3 cut(s) | 12, 102, 738 |
| BseAI | TCCGGA | 1 cut(s) | 1756 |
| BseBI | CCWGG | 4 cut(s) | 84, 939, 2378, 2421 |
| BseDI | CCNNGG | 4 cut(s) | 40, 938, 2377, 2702 |
| BseGI | GGATG | 6 cut(s) | 1253, 1268, 1478, 1529, 1952, 2071 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 46, 89, 667, 815, 1756, 2326, 2493, 2674 |
| BseMI | GCAATG | 3 cut(s) | 12, 102, 738 |
| BseMII | CTCAG | 4 cut(s) | 284, 439, 1821, 2567 |
| BseNI | ACTGG | 2 cut(s) | 711, 2331 |
| BseXI | GCAGC | 4 cut(s) | 379, 1563, 1580, 2091 |
| BshFI | GGCC | 2 cut(s) | 1281, 2019 |
| BshNI | GGYRCC | 1 cut(s) | 191 |
| BsiHKAI | GWGCWC | 3 cut(s) | 844, 1811, 2288 |
| BsiSI | CCGG | 1 cut(s) | 1757 |
| BslFI | GGGAC | 1 cut(s) | 435 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 46, 89, 667, 815, 1756, 2326, 2493, 2674 |
| BsmAI | GTCTC | 5 cut(s) | 1572, 1607, 1658, 2182, 2418 |
| BsmFI | GGGAC | 1 cut(s) | 435 |
| BsmI | GAATGC | 2 cut(s) | 84, 370 |
| BsnI | GGCC | 2 cut(s) | 1281, 2019 |
| Bsp1286I | GDGCHC | 3 cut(s) | 844, 1811, 2288 |
| Bsp13I | TCCGGA | 1 cut(s) | 1756 |
| Bsp1407I | TGTACA | 1 cut(s) | 2476 |
| Bsp19I | CCATGG | 1 cut(s) | 2702 |
| BspACI | CCGC | 3 cut(s) | 384, 662, 916 |
| BspANI | GGCC | 2 cut(s) | 1281, 2019 |
| BspCNI | CTCAG | 4 cut(s) | 285, 438, 1822, 2566 |
| BspEI | TCCGGA | 1 cut(s) | 1756 |
| BspHI | TCATGA | 1 cut(s) | 2239 |
| BspLI | GGNNCC | 4 cut(s) | 193, 271, 711, 2464 |
| BspMI | ACCTGC | 1 cut(s) | 2140 |
| BspPI | GGATC | 8 cut(s) | 527, 704, 717, 984, 1305, 2457, 2470, 2685 |
| BspT107I | GGYRCC | 1 cut(s) | 191 |
| BsrDI | GCAATG | 3 cut(s) | 12, 102, 738 |
| BsrGI | TGTACA | 1 cut(s) | 2476 |
| BsrI | ACTGG | 2 cut(s) | 711, 2331 |
| BssECI | CCNNGG | 4 cut(s) | 40, 938, 2377, 2702 |
| BssNAI | GTATAC | 1 cut(s) | 620 |
| BssSI | CACGAG | 1 cut(s) | 1218 |
| BssT1I | CCWWGG | 2 cut(s) | 40, 2702 |
| Bst1107I | GTATAC | 1 cut(s) | 620 |
| Bst2BI | CACGAG | 1 cut(s) | 1218 |
| Bst2UI | CCWGG | 4 cut(s) | 84, 939, 2378, 2421 |
| Bst4CI | ACNGT | 6 cut(s) | 815, 1451, 1736, 2263, 2476, 2621 |
| Bst6I | CTCTTC | 3 cut(s) | 345, 1671, 2421 |
| BstAUI | TGTACA | 1 cut(s) | 2476 |
| BstBAI | YACGTR | 3 cut(s) | 623, 833, 1192 |
| BstC8I | GCNNGC | 4 cut(s) | 242, 549, 2021, 2182 |
| BstDSI | CCRYGG | 1 cut(s) | 2702 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 44, 87 |
| BstF5I | GGATG | 6 cut(s) | 1253, 1268, 1478, 1529, 1952, 2071 |
| BstH2I | RGCGCY | 1 cut(s) | 1493 |
| BstHHI | GCGC | 4 cut(s) | 246, 948, 1492, 2109 |
| BstMAI | GTCTC | 5 cut(s) | 1572, 1607, 1658, 2182, 2418 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 252, 877, 943, 1007, 1708, 2528 |
| BstNI | CCWGG | 4 cut(s) | 84, 939, 2378, 2421 |
| BstNSI | RCATGY | 2 cut(s) | 747, 1309 |
| BstSCI | CCNGG | 4 cut(s) | 82, 937, 2376, 2419 |
| BstSFI | CTRYAG | 3 cut(s) | 552, 1002, 1735 |
| BstV1I | GCAGC | 4 cut(s) | 379, 1563, 1580, 2091 |
| BstV2I | GAAGAC | 2 cut(s) | 975, 1745 |
| BstX2I | RGATCY | 4 cut(s) | 709, 1297, 1789, 2462 |
| BstYI | RGATCY | 4 cut(s) | 709, 1297, 1789, 2462 |
| BstZ17I | GTATAC | 1 cut(s) | 620 |
| BsuRI | GGCC | 2 cut(s) | 1281, 2019 |
| BtgI | CCRYGG | 1 cut(s) | 2702 |
| BtgZI | GCGATG | 1 cut(s) | 480 |
| BtrI | CACGTC | 2 cut(s) | 973, 2165 |
| BtsCI | GGATG | 6 cut(s) | 1253, 1268, 1478, 1529, 1952, 2071 |
| BtsIMutI | CAGTG | 3 cut(s) | 433, 820, 1413 |
| BveI | ACCTGC | 1 cut(s) | 2140 |
| Cac8I | GCNNGC | 4 cut(s) | 242, 549, 2021, 2182 |
| CciI | TCATGA | 1 cut(s) | 2239 |
| CfoI | GCGC | 4 cut(s) | 246, 948, 1492, 2109 |
| Cfr13I | GGNCC | 3 cut(s) | 1280, 1639, 1980 |
| Csp6I | GTAC | 6 cut(s) | 827, 1778, 1861, 2330, 2477, 2617 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1410, 1445 |
| CviQI | GTAC | 6 cut(s) | 827, 1778, 1861, 2330, 2477, 2617 |
| DraIII | CACNNNGTG | 1 cut(s) | 428 |
| Eam1104I | CTCTTC | 3 cut(s) | 345, 1671, 2421 |
| EarI | CTCTTC | 3 cut(s) | 345, 1671, 2421 |
| EciI | GGCGGA | 1 cut(s) | 905 |
| Ecl136II | GAGCTC | 1 cut(s) | 842 |
| Eco130I | CCWWGG | 2 cut(s) | 40, 2702 |
| Eco24I | GRGCYC | 1 cut(s) | 844 |
| Eco47I | GGWCC | 2 cut(s) | 1639, 1980 |
| Eco47III | AGCGCT | 1 cut(s) | 1491 |
| Eco53kI | GAGCTC | 1 cut(s) | 842 |
| Eco57I | CTGAAG | 4 cut(s) | 487, 1086, 1437, 1688 |
| Eco72I | CACGTG | 1 cut(s) | 1192 |
| EcoICRI | GAGCTC | 1 cut(s) | 842 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 44, 87 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1639 |
| EcoRII | CCWGG | 4 cut(s) | 82, 937, 2376, 2419 |
| EcoT14I | CCWWGG | 2 cut(s) | 40, 2702 |
| EcoT22I | ATGCAT | 1 cut(s) | 882 |
| EcoT38I | GRGCYC | 1 cut(s) | 844 |
| ErhI | CCWWGG | 2 cut(s) | 40, 2702 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 297, 329, 342, 374 |
| FaqI | GGGAC | 1 cut(s) | 435 |
| FauI | CCCGC | 2 cut(s) | 377, 669 |
| FauNDI | CATATG | 4 cut(s) | 201, 859, 2682, 2695 |
| FbaI | TGATCA | 1 cut(s) | 142 |
| FblI | GTMKAC | 3 cut(s) | 571, 619, 1462 |
| Fnu4HI | GCNGC | 4 cut(s) | 368, 1552, 1594, 2105 |
| FokI | GGATG | 6 cut(s) | 1255, 1260, 1465, 1536, 1959, 2078 |
| FriOI | GRGCYC | 1 cut(s) | 844 |
| Fsp4HI | GCNGC | 4 cut(s) | 368, 1552, 1594, 2105 |
| FspBI | CTAG | 8 cut(s) | 108, 222, 251, 408, 600, 641, 734, 1439 |
| FspI | TGCGCA | 2 cut(s) | 245, 2108 |
| GlaI | GCGC | 4 cut(s) | 245, 947, 1491, 2108 |
| GluI | GCNGC | 4 cut(s) | 368, 1552, 1594, 2105 |
| HaeII | RGCGCY | 1 cut(s) | 1493 |
| HaeIII | GGCC | 2 cut(s) | 1281, 2019 |
| HapII | CCGG | 1 cut(s) | 1757 |
| HhaI | GCGC | 4 cut(s) | 246, 948, 1492, 2109 |
| Hin6I | GCGC | 4 cut(s) | 244, 946, 1490, 2107 |
| HinP1I | GCGC | 4 cut(s) | 244, 946, 1490, 2107 |
| HincII | GTYRAC | 2 cut(s) | 1054, 1474 |
| HindII | GTYRAC | 2 cut(s) | 1054, 1474 |
| HindIII | AAGCTT | 3 cut(s) | 694, 1068, 2178 |
| HpaI | GTTAAC | 1 cut(s) | 1474 |
| HpaII | CCGG | 1 cut(s) | 1757 |
| HphI | GGTGA | 4 cut(s) | 56, 482, 2366, 2393 |
| Hpy166II | GTNNAC | 8 cut(s) | 29, 572, 620, 960, 1054, 1184, 1463, 1474 |
| Hpy188I | TCNGA | 6 cut(s) | 506, 1648, 2065, 2556, 2569, 2677 |
| Hpy8I | GTNNAC | 8 cut(s) | 29, 572, 620, 960, 1054, 1184, 1463, 1474 |
| HpyAV | CCTTC | 7 cut(s) | 167, 511, 723, 761, 1010, 1331, 1868 |
| HpyCH4III | ACNGT | 6 cut(s) | 815, 1451, 1736, 2263, 2476, 2621 |
| HpyCH4IV | ACGT | 7 cut(s) | 622, 832, 972, 1050, 1191, 1780, 2164 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 252, 877, 943, 1007, 1708, 2528 |
| HpySE526I | ACGT | 7 cut(s) | 622, 832, 972, 1050, 1191, 1780, 2164 |
| HspAI | GCGC | 4 cut(s) | 244, 946, 1490, 2107 |
| Kpn2I | TCCGGA | 1 cut(s) | 1756 |
| Ksp22I | TGATCA | 1 cut(s) | 142 |
| KspAI | GTTAAC | 1 cut(s) | 1474 |
| LmnI | GCTCC | 2 cut(s) | 596, 1153 |
| Lsp1109I | GCAGC | 4 cut(s) | 379, 1563, 1580, 2091 |
| LweI | GCATC | 5 cut(s) | 1051, 1238, 1514, 2224, 2573 |
| MaeI | CTAG | 8 cut(s) | 108, 222, 251, 408, 600, 641, 734, 1439 |
| MaeII | ACGT | 7 cut(s) | 622, 832, 972, 1050, 1191, 1780, 2164 |
| MaeIII | GTNAC | 5 cut(s) | 354, 400, 1158, 1220, 2039 |
| MfeI | CAATTG | 2 cut(s) | 1692, 1989 |
| MflI | RGATCY | 4 cut(s) | 709, 1297, 1789, 2462 |
| MhlI | GDGCHC | 3 cut(s) | 844, 1811, 2288 |
| MlyI | GAGTC | 1 cut(s) | 1387 |
| MmeI | TCCRAC | 4 cut(s) | 46, 1131, 2347, 2655 |
| Mph1103I | ATGCAT | 1 cut(s) | 882 |
| MroI | TCCGGA | 1 cut(s) | 1756 |
| MroXI | GAANNNNTTC | 4 cut(s) | 213, 729, 1653, 1701 |
| MslI | CAYNNNNRTG | 5 cut(s) | 189, 200, 1194, 1936, 2379 |
| MspI | CCGG | 1 cut(s) | 1757 |
| MspR9I | CCNGG | 4 cut(s) | 84, 939, 2378, 2421 |
| MunI | CAATTG | 2 cut(s) | 1692, 1989 |
| Mva1269I | GAATGC | 2 cut(s) | 84, 370 |
| MvaI | CCWGG | 4 cut(s) | 84, 939, 2378, 2421 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 252, 877, 943, 1007, 1708, 2528 |
| NcoI | CCATGG | 1 cut(s) | 2702 |
| NdeI | CATATG | 4 cut(s) | 201, 859, 2682, 2695 |
| NlaIV | GGNNCC | 4 cut(s) | 193, 271, 711, 2464 |
| NmuCI | GTSAC | 2 cut(s) | 1220, 2039 |
| NsbI | TGCGCA | 2 cut(s) | 245, 2108 |
| NsiI | ATGCAT | 1 cut(s) | 882 |
| NspI | RCATGY | 2 cut(s) | 747, 1309 |
| OliI | CACNNNNGTG | 2 cut(s) | 1194, 2379 |
| PagI | TCATGA | 1 cut(s) | 2239 |
| PctI | GAATGC | 2 cut(s) | 84, 370 |
| PdmI | GAANNNNTTC | 4 cut(s) | 213, 729, 1653, 1701 |
| PfoI | TCCNGGA | 1 cut(s) | 2419 |
| PkrI | GCNGC | 4 cut(s) | 369, 1553, 1595, 2106 |
| PleI | GAGTC | 1 cut(s) | 1386 |
| PmaCI | CACGTG | 1 cut(s) | 1192 |
| PmlI | CACGTG | 1 cut(s) | 1192 |
| PpsI | GAGTC | 1 cut(s) | 1386 |
| Ppu21I | YACGTR | 3 cut(s) | 623, 833, 1192 |
| PpuMI | RGGWCCY | 1 cut(s) | 1639 |
| PsiI | TTATAA | 1 cut(s) | 1113 |
| Psp124BI | GAGCTC | 1 cut(s) | 844 |
| Psp5II | RGGWCCY | 1 cut(s) | 1639 |
| Psp6I | CCWGG | 4 cut(s) | 82, 937, 2376, 2419 |
| PspCI | CACGTG | 1 cut(s) | 1192 |
| PspGI | CCWGG | 4 cut(s) | 82, 937, 2376, 2419 |
| PspN4I | GGNNCC | 4 cut(s) | 193, 271, 711, 2464 |
| PspPI | GGNCC | 3 cut(s) | 1280, 1639, 1980 |
| PspPPI | RGGWCCY | 1 cut(s) | 1639 |
| PsuI | RGATCY | 4 cut(s) | 709, 1297, 1789, 2462 |
| RsaI | GTAC | 6 cut(s) | 828, 1779, 1862, 2331, 2478, 2618 |
| RsaNI | GTAC | 6 cut(s) | 827, 1778, 1861, 2330, 2477, 2617 |
| RseI | CAYNNNNRTG | 5 cut(s) | 189, 200, 1194, 1936, 2379 |
| SacI | GAGCTC | 1 cut(s) | 844 |
| SatI | GCNGC | 4 cut(s) | 368, 1552, 1594, 2105 |
| Sau96I | GGNCC | 3 cut(s) | 1280, 1639, 1980 |
| ScaI | AGTACT | 1 cut(s) | 828 |
| SchI | GAGTC | 1 cut(s) | 1387 |
| ScrFI | CCNGG | 4 cut(s) | 84, 939, 2378, 2421 |
| SduI | GDGCHC | 3 cut(s) | 844, 1811, 2288 |
| SfaNI | GCATC | 5 cut(s) | 1051, 1238, 1514, 2224, 2573 |
| SfcI | CTRYAG | 3 cut(s) | 552, 1002, 1735 |
| SinI | GGWCC | 2 cut(s) | 1639, 1980 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 189, 200, 1194, 1936, 2379 |
| SmlI | CTYRAG | 6 cut(s) | 541, 564, 1225, 1535, 1597, 2669 |
| SmoI | CTYRAG | 6 cut(s) | 541, 564, 1225, 1535, 1597, 2669 |
| SpeI | ACTAGT | 1 cut(s) | 1438 |
| SsiI | CCGC | 3 cut(s) | 384, 662, 916 |
| SspMI | CTAG | 8 cut(s) | 108, 222, 251, 408, 600, 641, 734, 1439 |
| SstI | GAGCTC | 1 cut(s) | 844 |
| StyD4I | CCNGG | 4 cut(s) | 82, 937, 2376, 2419 |
| StyI | CCWWGG | 2 cut(s) | 40, 2702 |
| TaaI | ACNGT | 6 cut(s) | 815, 1451, 1736, 2263, 2476, 2621 |
| TaiI | ACGT | 7 cut(s) | 625, 835, 975, 1053, 1194, 1783, 2167 |
| TaqI | TCGA | 2 cut(s) | 1037, 2389 |
| TatI | WGTACW | 3 cut(s) | 826, 2476, 2616 |
| TscAI | CASTG | 3 cut(s) | 433, 820, 1420 |
| TseFI | GTSAC | 2 cut(s) | 1220, 2039 |
| TseI | GCWGC | 4 cut(s) | 367, 1551, 1593, 2104 |
| Tsp45I | GTSAC | 2 cut(s) | 1220, 2039 |
| TspDTI | ATGAA | 9 cut(s) | 363, 981, 1357, 1962, 2156, 2293, 2306, 2574, 2677 |
| TspGWI | ACGGA | 3 cut(s) | 717, 1137, 1739 |
| TspRI | CASTG | 3 cut(s) | 433, 820, 1420 |
| VpaK11BI | GGWCC | 2 cut(s) | 1639, 1980 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 44, 87 |
| XapI | RAATTY | 5 cut(s) | 672, 783, 1364, 1650, 1843 |
| XbaI | TCTAGA | 1 cut(s) | 733 |
| XceI | RCATGY | 2 cut(s) | 747, 1309 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 280 |
| XmiI | GTMKAC | 3 cut(s) | 571, 619, 1462 |
| XmnI | GAANNNNTTC | 4 cut(s) | 213, 729, 1653, 1701 |
| XspI | CTAG | 8 cut(s) | 108, 222, 251, 408, 600, 641, 734, 1439 |
| ZrmI | AGTACT | 1 cut(s) | 828 |
| Zsp2I | ATGCAT | 1 cut(s) | 882 |