Rorug01G0392500

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
50279701 .. 50284874
5174 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0392500.1

Sequence Viewer

Length: 1242 bp
ATGGTTCCGAAGCACCCATCAGATCGGAGAACTTCGATCCGAAGAAGCCCGTCGAAACCCCACCTCACACTATCCTGCCAACCGTCGCTGATCAAGGAACAGAATACCGGTACCAGCAGTCTACTCCCGCCAGAGCCTCATAGCGATCAGAAAATGCAAGACCACCACAAGACTTGCAAGCTCGTCAAGGTTCGATCCACGCCGCCGCAGCACAGGCTGAGATACGACCATAAAAAAAGATCCCCGCCCGGCTGCACTCACCGCTCACCGACCAAGCTAAAAGCCTGGCACGGCGCGGGAGCCGCCGGACGAGAGCCTTCAACGGTCTCATTAGAATTAGAAGGGGTACAAAGCCTACAACATTTGCTAGTCTCCATTTGCTCAAGTGTGGAAGGCTTTGCTCAACTGGTTGGGATTCTTCTTCCAGATCTTCATTCAAATCGTCAGAGCTCTCGGCCACCATCCATTATTTTGTTCTTCTTCGTCTTCATTGTCTTCTTGTGCTCCCGAGGCTTCCTTCAAATCGTTGCCAGAGCACGACTCTTCCACCGCCGCGGCGCCGCCTCCGCCGTTGAAATCGATACTCCCAATTCTGACTCCGACTATCCTCCCCAGAAGCTACCGGTGGTTCTTGACCTGGATGAGACGGTAGGATGTACATATGAGTCGGCGAGCTTGCCCGGAATAGTTCGGACGCAAGCGACAGAAGGTGGGTTGAAGTGGTTTGAGCTCGAGTGTATTTCTTCGGACAAGGAATGTGATGGGAAACCGAAGGTGAATTATGTTACGGTTTTTGAGCGTCCGGGGCTGCATGAGTTCTTGAAACAAGTTCATGGGTTTGCCGATCTTGTGTTGTTTACTGCTGGACTTGAAGGTTATGCCAGACCACTTGTTGACAGAATAGACGTAGAGAACCTGTTCAGTTTTAGGCTTTATCGGCCTTCAACAACCAGCACGGAATACCGTGAGCATGTCAAGGATCTCTCTGGCCTATCAAAGGATATGGGCCGAATTGTTATTGTTGACAACAACCCTTTCAGTTTCTTGTTGCAACCTTTGAATGGAATTCCATGCATTCCATTTTCTGCTGGGCAAATACATGACACACAGCTTTTGGATGTTCTTCTTCCACTGCTCAAGCACCTATCACTGCAGAAAGACGTGAGACCTGCACTTTATGAGAGGTTTCACATGCCCGAATGGTTTCAAAAGCAGGGGATCCCTTCAACTAGTTGGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

413

Amino Acids

46.42

Weight (kDa)

8.97

Isoelectric Point (pI)

49.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NIF PF03031 209 - 389 3.9e-36 NLI interacting factor-like phosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1177
Acc65I GGTACC 1 cut(s) 110
AccB1I GGYRCC 2 cut(s) 110, 557
AccBSI CCGCTC 1 cut(s) 264
AccI GTMKAC 1 cut(s) 121
AccII CGCG 2 cut(s) 296, 555
AclWI GGATC 6 cut(s) 31, 189, 234, 987, 1213, 1226
AcoI YGGCCR 1 cut(s) 455
AcsI RAATTY 1 cut(s) 1065
AcyI GRCGYC 1 cut(s) 558
AfaI GTAC 3 cut(s) 112, 348, 658
AfiI CCNNNNNNNGG 2 cut(s) 997, 1061
AgeI ACCGGT 2 cut(s) 107, 622
AhlI ACTAGT 1 cut(s) 1229
AjiI CACGTC 1 cut(s) 1162
AjnI CCWGG 2 cut(s) 284, 636
AluBI AGCT 7 cut(s) 181, 277, 450, 619, 675, 730, 1111
AluI AGCT 7 cut(s) 181, 277, 450, 619, 675, 730, 1111
Alw21I GWGCWC 4 cut(s) 452, 506, 538, 732
Alw26I GTCTC 4 cut(s) 331, 376, 638, 1159
AlwI GGATC 6 cut(s) 31, 189, 234, 987, 1213, 1226
Ama87I CYCGRG 2 cut(s) 507, 731
AoxI GGCC 4 cut(s) 455, 938, 988, 1006
ApeKI GCWGC 3 cut(s) 208, 252, 808
ApoI RAATTY 1 cut(s) 1065
AsiGI ACCGGT 2 cut(s) 107, 622
Asp700I GAANNNNTTC 2 cut(s) 917, 1203
Asp718I GGTACC 1 cut(s) 110
AspLEI GCGC 2 cut(s) 296, 560
AspS9I GGNCC 1 cut(s) 1006
AsuC2I CCSGG 3 cut(s) 249, 681, 804
AsuHPI GGTGA 3 cut(s) 251, 258, 787
AvaI CYCGRG 2 cut(s) 507, 731
BamHI GGATCC 1 cut(s) 1218
BanI GGYRCC 2 cut(s) 110, 557
BanII GRGCYC 2 cut(s) 452, 732
BbsI GAAGAC 2 cut(s) 478, 487
Bbv12I GWGCWC 4 cut(s) 452, 506, 538, 732
BbvI GCAGC 3 cut(s) 220, 239, 795
BccI CCATC 3 cut(s) 25, 469, 755
BceAI ACGGC 2 cut(s) 307, 554
BciT130I CCWGG 2 cut(s) 286, 638
BclI TGATCA 1 cut(s) 90
BcnI CCSGG 3 cut(s) 249, 681, 804
BcoDI GTCTC 4 cut(s) 331, 376, 638, 1159
BcuI ACTAGT 1 cut(s) 1229
BfaI CTAG 2 cut(s) 368, 1230
BfmI CTRYAG 1 cut(s) 1151
BfoI RGCGCY 1 cut(s) 561
BfuAI ACCTGC 1 cut(s) 1177
BglII AGATCT 1 cut(s) 427
BisI GCNGC 9 cut(s) 203, 206, 209, 253, 303, 553, 556, 561, 809
BlsI GCNGC 9 cut(s) 204, 207, 210, 254, 304, 554, 557, 562, 810
Bme1390I CCNGG 5 cut(s) 249, 286, 638, 681, 804
BmeT110I CYCGRG 2 cut(s) 507, 731
BmgBI CACGTC 1 cut(s) 1162
BmgT120I GGNCC 1 cut(s) 1006
BmiI GGNNCC 5 cut(s) 6, 112, 301, 559, 1220
BmrFI CCNGG 5 cut(s) 249, 286, 638, 681, 804
BpiI GAAGAC 2 cut(s) 478, 487
BplI GAGNNNNNCTC 2 cut(s) 525, 557
BpuEI CTTGAG 2 cut(s) 367, 1121
BpuMI CCSGG 3 cut(s) 249, 681, 804
Bsa29I ATCGAT 1 cut(s) 579
BsaHI GRCGYC 1 cut(s) 558
BsaI GGTCTC 2 cut(s) 331, 1159
BsaJI CCNNGG 3 cut(s) 508, 553, 803
BsaWI WCCGGW 2 cut(s) 107, 622
Bsc4I CCNNNNNNNGG 2 cut(s) 997, 1061
Bse118I RCCGGY 2 cut(s) 107, 622
Bse1I ACTGG 1 cut(s) 411
BseBI CCWGG 2 cut(s) 286, 638
BseCI ATCGAT 1 cut(s) 579
BseDI CCNNGG 3 cut(s) 508, 553, 803
BseGI GGATG 4 cut(s) 461, 646, 659, 1123
BseLI CCNNNNNNNGG 2 cut(s) 997, 1061
BseMII CTCAG 1 cut(s) 209
BseNI ACTGG 1 cut(s) 411
BseXI GCAGC 3 cut(s) 220, 239, 795
BseYI CCCAGC 1 cut(s) 1088
BsgI GTGCAG 2 cut(s) 238, 1155
Bsh1236I CGCG 2 cut(s) 296, 555
BshFI GGCC 4 cut(s) 457, 940, 990, 1008
BshNI GGYRCC 2 cut(s) 110, 557
BshTI ACCGGT 2 cut(s) 107, 622
BshVI ATCGAT 1 cut(s) 579
BsiHKAI GWGCWC 4 cut(s) 452, 506, 538, 732
BsiHKCI CYCGRG 2 cut(s) 507, 731
BsiSI CCGG 6 cut(s) 108, 249, 306, 623, 681, 803
BslI CCNNNNNNNGG 2 cut(s) 997, 1061
BsmAI GTCTC 4 cut(s) 331, 376, 638, 1159
BsmBI CGTCTC 1 cut(s) 638
BsmI GAATGC 1 cut(s) 1074
BsnI GGCC 4 cut(s) 457, 940, 990, 1008
Bso31I GGTCTC 2 cut(s) 331, 1159
BsoBI CYCGRG 2 cut(s) 507, 731
Bsp1286I GDGCHC 4 cut(s) 452, 506, 538, 732
Bsp1407I TGTACA 1 cut(s) 656
BspANI GGCC 4 cut(s) 457, 940, 990, 1008
BspCNI CTCAG 1 cut(s) 210
BspDI ATCGAT 1 cut(s) 579
BspFNI CGCG 2 cut(s) 296, 555
BspLI GGNNCC 5 cut(s) 6, 112, 301, 559, 1220
BspMAI CTGCAG 1 cut(s) 1155
BspMI ACCTGC 1 cut(s) 1177
BspPI GGATC 6 cut(s) 31, 189, 234, 987, 1213, 1226
BspT107I GGYRCC 2 cut(s) 110, 557
BspTNI GGTCTC 2 cut(s) 331, 1159
BsrBI CCGCTC 1 cut(s) 264
BsrFI RCCGGY 2 cut(s) 107, 622
BsrGI TGTACA 1 cut(s) 656
BsrI ACTGG 1 cut(s) 411
BssAI RCCGGY 2 cut(s) 107, 622
BssECI CCNNGG 3 cut(s) 508, 553, 803
BssNI GRCGYC 1 cut(s) 558
Bst2UI CCWGG 2 cut(s) 286, 638
Bst4CI ACNGT 5 cut(s) 84, 325, 649, 790, 965
Bst6I CTCTTC 1 cut(s) 548
BstACI GRCGYC 1 cut(s) 558
BstAUI TGTACA 1 cut(s) 656
BstC8I GCNNGC 4 cut(s) 179, 673, 677, 699
BstDEI CTNAG 1 cut(s) 218
BstDSI CCRYGG 1 cut(s) 553
BstENI CCTNNNNNAGG 1 cut(s) 995
BstF5I GGATG 4 cut(s) 461, 646, 659, 1123
BstFNI CGCG 2 cut(s) 296, 555
BstH2I RGCGCY 1 cut(s) 561
BstHHI GCGC 2 cut(s) 296, 560
BstMAI GTCTC 4 cut(s) 331, 376, 638, 1159
BstMWI GCNNNNNNNGC 8 cut(s) 208, 214, 261, 302, 510, 566, 805, 937
BstNI CCWGG 2 cut(s) 286, 638
BstNSI RCATGY 2 cut(s) 974, 1195
BstSCI CCNGG 5 cut(s) 247, 284, 636, 679, 802
BstSFI CTRYAG 1 cut(s) 1151
BstUI CGCG 2 cut(s) 296, 555
BstV1I GCAGC 3 cut(s) 220, 239, 795
BstV2I GAAGAC 2 cut(s) 478, 487
BstX2I RGATCY 4 cut(s) 239, 427, 979, 1218
BstYI RGATCY 4 cut(s) 239, 427, 979, 1218
Bsu15I ATCGAT 1 cut(s) 579
BsuRI GGCC 4 cut(s) 457, 940, 990, 1008
BsuTUI ATCGAT 1 cut(s) 579
BtgI CCRYGG 1 cut(s) 553
BtrI CACGTC 1 cut(s) 1162
BtsCI GGATG 4 cut(s) 461, 646, 659, 1123
BtsI GCAGTG 2 cut(s) 1130, 1148
BtsIMutI CAGTG 2 cut(s) 1130, 1148
BveI ACCTGC 1 cut(s) 1177
Cac8I GCNNGC 4 cut(s) 179, 673, 677, 699
CfoI GCGC 2 cut(s) 296, 560
Cfr10I RCCGGY 2 cut(s) 107, 622
Cfr13I GGNCC 1 cut(s) 1006
Cfr42I CCGCGG 1 cut(s) 556
ClaI ATCGAT 1 cut(s) 579
CseI GACGC 2 cut(s) 703, 788
Csp6I GTAC 3 cut(s) 111, 347, 657
CspAI ACCGGT 2 cut(s) 107, 622
CspCI CAANNNNNGTGG 2 cut(s) 155, 190
CviAII CATG 6 cut(s) 812, 833, 971, 1071, 1100, 1192
CviQI GTAC 3 cut(s) 111, 347, 657
DdeI CTNAG 1 cut(s) 218
DinI GGCGCC 1 cut(s) 559
EaeI YGGCCR 1 cut(s) 455
Eam1104I CTCTTC 1 cut(s) 548
EarI CTCTTC 1 cut(s) 548
EciI GGCGGA 1 cut(s) 556
Ecl136II GAGCTC 2 cut(s) 450, 730
Eco24I GRGCYC 2 cut(s) 452, 732
Eco31I GGTCTC 2 cut(s) 331, 1159
Eco53kI GAGCTC 2 cut(s) 450, 730
Eco88I CYCGRG 2 cut(s) 507, 731
EcoICRI GAGCTC 2 cut(s) 450, 730
EcoNI CCTNNNNNAGG 1 cut(s) 995
EcoRI GAATTC 1 cut(s) 1065
EcoRII CCWGG 2 cut(s) 284, 636
EcoT22I ATGCAT 1 cut(s) 1076
EcoT38I GRGCYC 2 cut(s) 452, 732
EgeI GGCGCC 1 cut(s) 559
EheI GGCGCC 1 cut(s) 559
Esp3I CGTCTC 1 cut(s) 638
FaeI CATG 6 cut(s) 815, 836, 974, 1074, 1103, 1195
FatI CATG 6 cut(s) 811, 832, 970, 1070, 1099, 1191
FauI CCCGC 3 cut(s) 135, 252, 289
FauNDI CATATG 1 cut(s) 661
FbaI TGATCA 1 cut(s) 90
FblI GTMKAC 1 cut(s) 121
Fnu4HI GCNGC 9 cut(s) 203, 206, 209, 253, 303, 553, 556, 561, 809
FokI GGATG 4 cut(s) 448, 653, 666, 1130
FriOI GRGCYC 2 cut(s) 452, 732
Fsp4HI GCNGC 9 cut(s) 203, 206, 209, 253, 303, 553, 556, 561, 809
FspBI CTAG 2 cut(s) 368, 1230
GlaI GCGC 2 cut(s) 295, 559
GluI GCNGC 9 cut(s) 203, 206, 209, 253, 303, 553, 556, 561, 809
GsaI CCCAGC 1 cut(s) 1092
HaeII RGCGCY 1 cut(s) 561
HaeIII GGCC 4 cut(s) 457, 940, 990, 1008
HapII CCGG 6 cut(s) 108, 249, 306, 623, 681, 803
HgaI GACGC 2 cut(s) 703, 788
HhaI GCGC 2 cut(s) 296, 560
Hin1I GRCGYC 1 cut(s) 558
Hin1II CATG 6 cut(s) 815, 836, 974, 1074, 1103, 1195
Hin6I GCGC 2 cut(s) 294, 558
HinP1I GCGC 2 cut(s) 294, 558
HincII GTYRAC 2 cut(s) 895, 1024
HindII GTYRAC 2 cut(s) 895, 1024
HinfI GANTC 4 cut(s) 415, 540, 596, 665
HpaII CCGG 6 cut(s) 108, 249, 306, 623, 681, 803
HphI GGTGA 3 cut(s) 251, 258, 787
Hpy166II GTNNAC 4 cut(s) 122, 858, 895, 1024
Hpy188III TCNNGA 4 cut(s) 425, 507, 632, 820
Hpy8I GTNNAC 4 cut(s) 122, 858, 895, 1024
Hpy99I CGWCG 2 cut(s) 55, 88
HpyAV CCTTC 9 cut(s) 327, 335, 386, 527, 701, 766, 866, 951, 1233
HpyCH4III ACNGT 5 cut(s) 84, 325, 649, 790, 965
HpyCH4IV ACGT 2 cut(s) 906, 1161
HpyCH4V TGCA 8 cut(s) 157, 177, 255, 811, 1051, 1074, 1153, 1172
HpyF10VI GCNNNNNNNGC 8 cut(s) 208, 214, 261, 302, 510, 566, 805, 937
HpyF3I CTNAG 1 cut(s) 218
HpySE526I ACGT 2 cut(s) 906, 1161
Hsp92I GRCGYC 1 cut(s) 558
Hsp92II CATG 6 cut(s) 815, 836, 974, 1074, 1103, 1195
HspAI GCGC 2 cut(s) 294, 558
KasI GGCGCC 1 cut(s) 557
KpnI GGTACC 1 cut(s) 114
Ksp22I TGATCA 1 cut(s) 90
KspI CCGCGG 1 cut(s) 556
LmnI GCTCC 2 cut(s) 299, 509
Lsp1109I GCAGC 3 cut(s) 220, 239, 795
MaeI CTAG 2 cut(s) 368, 1230
MaeII ACGT 2 cut(s) 906, 1161
MaeIII GTNAC 1 cut(s) 784
MbiI CCGCTC 1 cut(s) 264
MflI RGATCY 4 cut(s) 239, 427, 979, 1218
MhlI GDGCHC 4 cut(s) 452, 506, 538, 732
MluCI AATT 5 cut(s) 335, 589, 778, 1011, 1065
Mly113I GGCGCC 1 cut(s) 558
MlyI GAGTC 3 cut(s) 534, 590, 674
MmeI TCCRAC 2 cut(s) 624, 1214
MnlI CCTC 6 cut(s) 74, 147, 503, 574, 618, 1176
Mph1103I ATGCAT 1 cut(s) 1076
MroXI GAANNNNTTC 2 cut(s) 917, 1203
MspA1I CMGCKG 1 cut(s) 555
MspI CCGG 6 cut(s) 108, 249, 306, 623, 681, 803
MspR9I CCNGG 5 cut(s) 249, 286, 638, 681, 804
Mva1269I GAATGC 1 cut(s) 1074
MvaI CCWGG 2 cut(s) 286, 638
MvnI CGCG 2 cut(s) 296, 555
MwoI GCNNNNNNNGC 8 cut(s) 208, 214, 261, 302, 510, 566, 805, 937
NarI GGCGCC 1 cut(s) 558
NciI CCSGG 3 cut(s) 249, 681, 804
NdeI CATATG 1 cut(s) 661
NlaIII CATG 6 cut(s) 815, 836, 974, 1074, 1103, 1195
NlaIV GGNNCC 5 cut(s) 6, 112, 301, 559, 1220
NmeAIII GCCGAG 1 cut(s) 433
NsiI ATGCAT 1 cut(s) 1076
NspI RCATGY 2 cut(s) 974, 1195
PaeR7I CTCGAG 1 cut(s) 731
PctI GAATGC 1 cut(s) 1074
PdmI GAANNNNTTC 2 cut(s) 917, 1203
PfeI GAWTC 1 cut(s) 415
PinAI ACCGGT 2 cut(s) 107, 622
PkrI GCNGC 9 cut(s) 204, 207, 210, 254, 304, 554, 557, 562, 810
PleI GAGTC 3 cut(s) 534, 590, 673
PluTI GGCGCC 1 cut(s) 561
PpsI GAGTC 3 cut(s) 534, 590, 673
Psp124BI GAGCTC 2 cut(s) 452, 732
Psp6I CCWGG 2 cut(s) 284, 636
PspFI CCCAGC 1 cut(s) 1088
PspGI CCWGG 2 cut(s) 284, 636
PspN4I GGNNCC 5 cut(s) 6, 112, 301, 559, 1220
PspPI GGNCC 1 cut(s) 1006
PspXI VCTCGAGB 1 cut(s) 731
PstI CTGCAG 1 cut(s) 1155
PsuI RGATCY 4 cut(s) 239, 427, 979, 1218
RsaI GTAC 3 cut(s) 112, 348, 658
RsaNI GTAC 3 cut(s) 111, 347, 657
SacI GAGCTC 2 cut(s) 452, 732
SacII CCGCGG 1 cut(s) 556
SatI GCNGC 9 cut(s) 203, 206, 209, 253, 303, 553, 556, 561, 809
Sau96I GGNCC 1 cut(s) 1006
SchI GAGTC 3 cut(s) 534, 590, 674
ScrFI CCNGG 5 cut(s) 249, 286, 638, 681, 804
SduI GDGCHC 4 cut(s) 452, 506, 538, 732
SfcI CTRYAG 1 cut(s) 1151
SfoI GGCGCC 1 cut(s) 559
Sfr274I CTCGAG 1 cut(s) 731
Sfr303I CCGCGG 1 cut(s) 556
SgrBI CCGCGG 1 cut(s) 556
SlaI CTCGAG 1 cut(s) 731
SmlI CTYRAG 3 cut(s) 382, 731, 1136
SmoI CTYRAG 3 cut(s) 382, 731, 1136
SpeI ACTAGT 1 cut(s) 1229
Sse9I AATT 5 cut(s) 335, 589, 778, 1011, 1065
SspDI GGCGCC 1 cut(s) 557
SspMI CTAG 2 cut(s) 368, 1230
SstI GAGCTC 2 cut(s) 452, 732
StyD4I CCNGG 5 cut(s) 247, 284, 636, 679, 802
TaaI ACNGT 5 cut(s) 84, 325, 649, 790, 965
TaiI ACGT 2 cut(s) 909, 1164
TaqI TCGA 5 cut(s) 35, 53, 193, 579, 732
TasI AATT 5 cut(s) 335, 589, 778, 1011, 1065
TatI WGTACW 1 cut(s) 656
TauI GCSGC 6 cut(s) 205, 208, 305, 555, 558, 563
TfiI GAWTC 1 cut(s) 415
TscAI CASTG 2 cut(s) 1137, 1155
TseI GCWGC 3 cut(s) 208, 252, 808
TspDTI ATGAA 3 cut(s) 422, 478, 821
TspGWI ACGGA 1 cut(s) 971
TspRI CASTG 2 cut(s) 1137, 1155
XagI CCTNNNNNAGG 1 cut(s) 995
XapI RAATTY 1 cut(s) 1065
XceI RCATGY 2 cut(s) 974, 1195
XhoI CTCGAG 1 cut(s) 731
XmiI GTMKAC 1 cut(s) 121
XmnI GAANNNNTTC 2 cut(s) 917, 1203
XspI CTAG 2 cut(s) 368, 1230
Zsp2I ATGCAT 1 cut(s) 1076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.