MD04G1022700.v1.1

Leucine-rich repeats, outliers

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0000067
Physical Location & Seq
Reverse (-)
2647183 .. 2654900
7718 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1022700.v1.1.491

Sequence Viewer

Length: 975 bp
ATGGTTGTGAAGGGGTTATGGAGTCTTCGTTTAAATGGGACTGCAATTGAAGAATTGCCGTCGTCAATTAAAAATCTTACAGAGCTTGTTACTTTGGACTTGAAAGGTTGCGTGAAGCTTAAAAGTCTCCCGAGCAGTATCTGTCAACTCAAGTCCCTTAGATATGTTACTCTTTCTGGCTGCTCAAATCTTGAGAAGTTTCCAGAGATTTTAGAAGTTATGGAAGAGCTCTGGTGCCTTTATTTAGATGGGACTGCAATTCAGGAACTACCCTCGTCAATTGAAAATCTTTCCGGGCTGAATACTTTGAAGCTAAATGGTTGTCTAAGGCTTCAAAGTCTTCCAAGCAGCATCTGCCAACTCAAGTCTCTTAGAAATGTTTCTCTTTCTGGCTGCTCAAGTTTTGAGAAGTTTCCTGAGATTTCAAAAGTTACAGAAGGGTTCACTTACCTTTCTTTAGATAGGACTGCAATACGAGAATTGCCGTTGTCAATTAAAAATCTTAAGGGTCTTGTTTCTTTGAACCTTAAGGACTGCAGAGAACTTAAGAGTCTTCCAAGCAGCATATGTCAACTCAAGTCCCTCAAATATGTCACTCTTTCTGGTTGTCCAAAGCTTGAGTTGGTACTCGCACCATGGGAAGTGGCAAGTGGCCGAACCGTTGGGGTTTCATTTTATGCTTTAAGAAACTCTAGAGCAATTGCAACTCTAGCATTTCTTGGGAGAAGGGTTGGGTTTGGCCATCTCCTGTTTGTGGCATTTTCATTCAGAGGACCCAATTTCCGAGCCCTGAAATTCTCAAGCCTGATGTGGCGGCGGGCACCAGGGATGAACATTTTTCCTTGGACTGGAGAGTTAGGTGCGTCAAGTTTTCCAACAGACCACCGTAGAATGAACTTCAATATCATGCCCTCATGTGTGTCATCGCTGCTTTCCTCAAGGCTAACTACACCTCAAACAGTAAAACAGCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8

Protein Analysis

325

Amino Acids

35.92

Weight (kDa)

9.54

Isoelectric Point (pI)

47.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 9 - 80 1.9e-11 Leucine-rich repeat region
LRR_13 PF23286 12 - 64 4.3e-07 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_13 PF23286 50 - 134 1.9e-12 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 79 - 131 2.5e-08 Leucine-rich repeat region
LRR_13 PF23286 121 - 206 2.3e-11 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 148 - 203 3e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 234, 820
AciI CCGC 2 cut(s) 814, 817
AcoI YGGCCR 2 cut(s) 652, 739
AcsI RAATTY 1 cut(s) 794
AfaI GTAC 1 cut(s) 627
AfiI CCNNNNNNNGG 2 cut(s) 754, 848
AflII CTTAAG 3 cut(s) 503, 527, 545
AgsI TTSAA 8 cut(s) 50, 103, 284, 310, 335, 426, 523, 901
AjnI CCWGG 1 cut(s) 823
AluBI AGCT 5 cut(s) 85, 118, 229, 313, 616
AluI AGCT 5 cut(s) 85, 118, 229, 313, 616
Alw21I GWGCWC 1 cut(s) 231
Alw26I GTCTC 2 cut(s) 131, 372
AlwNI CAGNNNCTG 2 cut(s) 141, 354
Ama87I CYCGRG 1 cut(s) 130
AoxI GGCC 2 cut(s) 652, 739
ApeKI GCWGC 5 cut(s) 180, 348, 393, 561, 928
ApoI RAATTY 1 cut(s) 794
Asp700I GAANNNNTTC 1 cut(s) 379
AspS9I GGNCC 1 cut(s) 773
AsuC2I CCSGG 1 cut(s) 295
AvaI CYCGRG 1 cut(s) 130
AvaII GGWCC 1 cut(s) 773
BaeGI GKGCMC 1 cut(s) 823
BalI TGGCCA 1 cut(s) 741
BanI GGYRCC 2 cut(s) 234, 820
BanII GRGCYC 2 cut(s) 231, 790
BbsI GAAGAC 3 cut(s) 17, 332, 545
Bbv12I GWGCWC 1 cut(s) 231
BbvI GCAGC 5 cut(s) 167, 360, 380, 573, 915
BccI CCATC 2 cut(s) 242, 750
BceAI ACGGC 2 cut(s) 43, 469
BciT130I CCWGG 1 cut(s) 825
BcnI CCSGG 1 cut(s) 295
BcoDI GTCTC 2 cut(s) 131, 372
BfaI CTAG 2 cut(s) 693, 710
BfmI CTRYAG 1 cut(s) 535
BfrI CTTAAG 3 cut(s) 503, 527, 545
BisI GCNGC 6 cut(s) 181, 349, 394, 562, 815, 929
BlsI GCNGC 6 cut(s) 182, 350, 395, 563, 816, 930
Bme1390I CCNGG 2 cut(s) 295, 825
Bme18I GGWCC 1 cut(s) 773
BmeT110I CYCGRG 1 cut(s) 130
BmgT120I GGNCC 1 cut(s) 773
BmiI GGNNCC 3 cut(s) 236, 775, 822
BmrFI CCNGG 2 cut(s) 295, 825
BmsI GCATC 1 cut(s) 360
BpiI GAAGAC 3 cut(s) 17, 332, 545
BpmI CTGGAG 1 cut(s) 870
BpuEI CTTGAG 8 cut(s) 134, 212, 347, 382, 560, 638, 784, 922
BpuMI CCSGG 1 cut(s) 295
BsaJI CCNNGG 3 cut(s) 635, 824, 842
BsaXI ACNNNNNCTCC 2 cut(s) 13, 43
Bsc4I CCNNNNNNNGG 2 cut(s) 754, 848
Bse1I ACTGG 1 cut(s) 853
BseBI CCWGG 1 cut(s) 825
BseDI CCNNGG 3 cut(s) 635, 824, 842
BseGI GGATG 1 cut(s) 834
BseLI CCNNNNNNNGG 2 cut(s) 754, 848
BseMII CTCAG 1 cut(s) 408
BseNI ACTGG 1 cut(s) 853
BseSI GKGCMC 1 cut(s) 823
BseXI GCAGC 5 cut(s) 167, 360, 380, 573, 915
BshFI GGCC 2 cut(s) 654, 741
BshNI GGYRCC 2 cut(s) 234, 820
BsiHKAI GWGCWC 1 cut(s) 231
BsiHKCI CYCGRG 1 cut(s) 130
BsiSI CCGG 1 cut(s) 294
BslFI GGGAC 4 cut(s) 52, 139, 265, 565
BslI CCNNNNNNNGG 2 cut(s) 754, 848
BsmAI GTCTC 2 cut(s) 131, 372
BsmFI GGGAC 4 cut(s) 52, 139, 265, 565
BsnI GGCC 2 cut(s) 654, 741
BsoBI CYCGRG 1 cut(s) 130
Bsp1286I GDGCHC 3 cut(s) 231, 790, 823
Bsp19I CCATGG 1 cut(s) 635
BspACI CCGC 2 cut(s) 814, 817
BspANI GGCC 2 cut(s) 654, 741
BspCNI CTCAG 1 cut(s) 409
BspLI GGNNCC 3 cut(s) 236, 775, 822
BspMAI CTGCAG 1 cut(s) 539
BspQI GCTCTTC 1 cut(s) 219
BspT107I GGYRCC 2 cut(s) 234, 820
BspTI CTTAAG 3 cut(s) 503, 527, 545
BsrI ACTGG 1 cut(s) 853
BssECI CCNNGG 3 cut(s) 635, 824, 842
BssT1I CCWWGG 2 cut(s) 635, 842
Bst2UI CCWGG 1 cut(s) 825
Bst4CI ACNGT 3 cut(s) 661, 887, 961
Bst6I CTCTTC 1 cut(s) 219
BstAFI CTTAAG 3 cut(s) 503, 527, 545
BstAPI GCANNNNNTGC 1 cut(s) 354
BstC8I GCNNGC 1 cut(s) 819
BstDEI CTNAG 4 cut(s) 158, 326, 371, 417
BstDSI CCRYGG 1 cut(s) 635
BstF5I GGATG 1 cut(s) 834
BstMAI GTCTC 2 cut(s) 131, 372
BstMWI GCNNNNNNNGC 2 cut(s) 354, 710
BstNI CCWGG 1 cut(s) 825
BstSCI CCNGG 2 cut(s) 293, 823
BstSFI CTRYAG 1 cut(s) 535
BstSLI GKGCMC 1 cut(s) 823
BstV1I GCAGC 5 cut(s) 167, 360, 380, 573, 915
BstV2I GAAGAC 3 cut(s) 17, 332, 545
BsuRI GGCC 2 cut(s) 654, 741
BtgI CCRYGG 1 cut(s) 635
BtgZI GCGATG 1 cut(s) 909
BtsCI GGATG 1 cut(s) 834
Cac8I GCNNGC 1 cut(s) 819
CaiI CAGNNNCTG 2 cut(s) 141, 354
Cfr13I GGNCC 1 cut(s) 773
CseI GACGC 1 cut(s) 852
Csp6I GTAC 1 cut(s) 626
CviAII CATG 3 cut(s) 636, 907, 915
CviQI GTAC 1 cut(s) 626
DdeI CTNAG 4 cut(s) 158, 326, 371, 417
DraI TTTAAA 1 cut(s) 33
EaeI YGGCCR 2 cut(s) 652, 739
Eam1104I CTCTTC 1 cut(s) 219
EarI CTCTTC 1 cut(s) 219
Ecl136II GAGCTC 1 cut(s) 229
Eco130I CCWWGG 2 cut(s) 635, 842
Eco24I GRGCYC 2 cut(s) 231, 790
Eco47I GGWCC 1 cut(s) 773
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 1 cut(s) 130
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 773
EcoRII CCWGG 1 cut(s) 823
EcoT14I CCWWGG 2 cut(s) 635, 842
EcoT38I GRGCYC 2 cut(s) 231, 790
ErhI CCWWGG 2 cut(s) 635, 842
FaeI CATG 3 cut(s) 639, 910, 918
FaqI GGGAC 4 cut(s) 52, 139, 265, 565
FatI CATG 3 cut(s) 635, 906, 914
FauI CCCGC 1 cut(s) 810
FauNDI CATATG 1 cut(s) 566
Fnu4HI GCNGC 6 cut(s) 181, 349, 394, 562, 815, 929
FokI GGATG 1 cut(s) 841
FriOI GRGCYC 2 cut(s) 231, 790
Fsp4HI GCNGC 6 cut(s) 181, 349, 394, 562, 815, 929
FspBI CTAG 2 cut(s) 693, 710
GluI GCNGC 6 cut(s) 181, 349, 394, 562, 815, 929
GsuI CTGGAG 1 cut(s) 870
HaeIII GGCC 2 cut(s) 654, 741
HapII CCGG 1 cut(s) 294
HgaI GACGC 1 cut(s) 852
Hin1II CATG 3 cut(s) 639, 910, 918
HincII GTYRAC 2 cut(s) 146, 572
HindII GTYRAC 2 cut(s) 146, 572
HindIII AAGCTT 2 cut(s) 116, 614
HinfI GANTC 2 cut(s) 22, 550
HpaII CCGG 1 cut(s) 294
Hpy166II GTNNAC 3 cut(s) 146, 444, 572
Hpy188I TCNGA 2 cut(s) 770, 785
Hpy188III TCNNGA 6 cut(s) 130, 191, 203, 263, 416, 693
Hpy8I GTNNAC 3 cut(s) 146, 444, 572
Hpy99I CGWCG 1 cut(s) 64
HpyAV CCTTC 3 cut(s) 4, 431, 720
HpyCH4III ACNGT 3 cut(s) 661, 887, 961
HpyCH4V TGCA 5 cut(s) 44, 257, 470, 537, 704
HpyF10VI GCNNNNNNNGC 2 cut(s) 354, 710
HpyF3I CTNAG 4 cut(s) 158, 326, 371, 417
Hsp92II CATG 3 cut(s) 639, 910, 918
LguI GCTCTTC 1 cut(s) 219
Lsp1109I GCAGC 5 cut(s) 167, 360, 380, 573, 915
LweI GCATC 1 cut(s) 360
MaeI CTAG 2 cut(s) 693, 710
MaeIII GTNAC 4 cut(s) 88, 166, 430, 592
MboII GAAGA 5 cut(s) 17, 62, 236, 332, 545
MfeI CAATTG 3 cut(s) 45, 279, 699
MhlI GDGCHC 3 cut(s) 231, 790, 823
MlsI TGGCCA 1 cut(s) 741
MluNI TGGCCA 1 cut(s) 741
MlyI GAGTC 2 cut(s) 31, 559
MmeI TCCRAC 1 cut(s) 899
MnlI CCTC 6 cut(s) 283, 593, 764, 922, 946, 963
Mox20I TGGCCA 1 cut(s) 741
MroXI GAANNNNTTC 1 cut(s) 379
MscI TGGCCA 1 cut(s) 741
MseI TTAA 8 cut(s) 32, 69, 120, 495, 504, 528, 546, 683
Msp20I TGGCCA 1 cut(s) 741
MspCI CTTAAG 3 cut(s) 503, 527, 545
MspI CCGG 1 cut(s) 294
MspR9I CCNGG 2 cut(s) 295, 825
MunI CAATTG 3 cut(s) 45, 279, 699
MvaI CCWGG 1 cut(s) 825
MwoI GCNNNNNNNGC 2 cut(s) 354, 710
NciI CCSGG 1 cut(s) 295
NcoI CCATGG 1 cut(s) 635
NdeI CATATG 1 cut(s) 566
NlaIII CATG 3 cut(s) 639, 910, 918
NlaIV GGNNCC 3 cut(s) 236, 775, 822
NmuCI GTSAC 1 cut(s) 592
PciSI GCTCTTC 1 cut(s) 219
PdmI GAANNNNTTC 1 cut(s) 379
PkrI GCNGC 6 cut(s) 182, 350, 395, 563, 816, 930
PleI GAGTC 2 cut(s) 30, 558
PpsI GAGTC 2 cut(s) 30, 558
PpuMI RGGWCCY 1 cut(s) 773
Psp124BI GAGCTC 1 cut(s) 231
Psp5II RGGWCCY 1 cut(s) 773
Psp6I CCWGG 1 cut(s) 823
PspGI CCWGG 1 cut(s) 823
PspN4I GGNNCC 3 cut(s) 236, 775, 822
PspPI GGNCC 1 cut(s) 773
PspPPI RGGWCCY 1 cut(s) 773
PstI CTGCAG 1 cut(s) 539
PstNI CAGNNNCTG 2 cut(s) 141, 354
RsaI GTAC 1 cut(s) 627
RsaNI GTAC 1 cut(s) 626
SacI GAGCTC 1 cut(s) 231
SapI GCTCTTC 1 cut(s) 219
SaqAI TTAA 8 cut(s) 32, 69, 120, 495, 504, 528, 546, 683
SatI GCNGC 6 cut(s) 181, 349, 394, 562, 815, 929
Sau96I GGNCC 1 cut(s) 773
SchI GAGTC 2 cut(s) 31, 559
ScrFI CCNGG 2 cut(s) 295, 825
SduI GDGCHC 3 cut(s) 231, 790, 823
SfaNI GCATC 1 cut(s) 360
SfcI CTRYAG 1 cut(s) 535
SinI GGWCC 1 cut(s) 773
SsiI CCGC 2 cut(s) 814, 817
SspMI CTAG 2 cut(s) 693, 710
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 2 cut(s) 293, 823
StyI CCWWGG 2 cut(s) 635, 842
TaaI ACNGT 3 cut(s) 661, 887, 961
TauI GCSGC 1 cut(s) 817
Tru1I TTAA 8 cut(s) 32, 69, 120, 495, 504, 528, 546, 683
Tru9I TTAA 8 cut(s) 32, 69, 120, 495, 504, 528, 546, 683
TseFI GTSAC 1 cut(s) 592
TseI GCWGC 5 cut(s) 180, 348, 393, 561, 928
Tsp45I GTSAC 1 cut(s) 592
TspDTI ATGAA 4 cut(s) 660, 753, 845, 908
Vha464I CTTAAG 3 cut(s) 503, 527, 545
VpaK11BI GGWCC 1 cut(s) 773
XapI RAATTY 1 cut(s) 794
XbaI TCTAGA 1 cut(s) 692
XmnI GAANNNNTTC 1 cut(s) 379
XspI CTAG 2 cut(s) 693, 710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.