Rroxscaffold_3G00228770

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
13178398 .. 13187112
8715 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00228770.1

Sequence Viewer

Length: 1422 bp
ATGACGAGACTAAGATTGGTCAGAATCGATTACAGTTTGGACCGGCTTCTCCATGCGATTCCAAGTGCAGACCTTAAACAATATGTGAGTGGGGACTTGAAGTTTCTCTCTGATGAGTTAAGGCTTCTCTACTGGCACGGATGCCCTTACTCATCATTGCCATCCAACTTTAGGCCGAGGAATCTTATCGACCTTGACTCGCTTTTTAGTCACATTCAACGACTTTGGGAAGGAACAAAGATGTGCATAAACAATTTGGAGAGCTTACCTGCAACAATGAGTCAACTTGGTTGCCTAACACATCTTGAATTGGAGGCTTGCAAGAGGCTGAAATCAATTCCACAGGTTTCATCAAGTGTGAAGTACATAGATGCTCATGATTGCACAGCTTTAGAGTTGGTGTCAACGCCAAATCCCCTGTACGAAAAGAATCTTTGGTTCACATTTTCTAACTGCTCCCCGCTGGTACAAACAAATCTATTTATAGATGTTGTGGAAACTCATTCTTATCATCAAGGTGATCTGCAACCTCTTTCCTTTTACATGTGTCTTCCTGGAAGAGAAATTCCAGCTTGGTTCAGCCATCAGTGTAGGGGATCCTTAATCACTTTGCAGCTACCACCCAATTGTTTCCATGATAACTTTCTGGGATTTTCTATCTGCGTTGCTTGTAACTTTGAGGATGCTTGTAATTATCCTTCTAATCTATATGCTCTATGTTTTTGCACAACCAAGGGAAATCATGGGGAGCACAGTTTTCAGTTGCTCTATCCGGGCTTCCAAACTGACAGATTGTTTGAGTTGGATCACATGTTTTTGGTATATGTTCCATGGTTTGAATATCACCTAATTGAAGAAGGAGACCCGGTCAATGAAGGCTATTTCACTGAGGTCACATTTAGTATTATTGTAGAAAGTGATTCCACTGCAAAACAATTCCATTGTATCACAAGCTGTGGCCTCTTCACGCATGGCTACCGAGACGCACTACTTTGGGAGCACAGTGCTACAATACTTACGGAGCACAGTGCCACAATACTCTCGGGGCACAGTGCCACAATACTCTCAGAGCTCAGCTCTTCACCTTATGTAACTGGACATTATCCCCATGAGGCTCCAGAATCCGTTGTTTATGGTCCCCAAGACCTCATAACTCAAGCAGAAAGTTTTGTTTCTCTCCCAGATGTCAAGCTATTTCCCAACAAGTATAGGGAGATAATGGCCAAGAAACTTTCCGGCATACAAGTCCCGGTAGAAGATCAAGCATCTATCATTGAAAAAATATTTGAGTTGCCGGCATTGTTCCCATTGTCAGAGCCGCTGCAGAAAGCATATGAATCGCTTCCCAAAAGACAGGCGTCAAAAGATGTCCTAGTTGGGATTGCAAACTTGTTTTGTAGTTTGGTGCAACAAGTCACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

473

Amino Acids

53.65

Weight (kDa)

5.39

Isoelectric Point (pI)

47.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 184 - 320 1.6e-16 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 277
AciI CCGC 2 cut(s) 461, 1319
AclWI GGATC 3 cut(s) 591, 604, 813
AcoI YGGCCR 1 cut(s) 1221
AcsI RAATTY 1 cut(s) 564
AcyI GRCGYC 1 cut(s) 1358
AfaI GTAC 3 cut(s) 365, 422, 468
AfiI CCNNNNNNNGG 1 cut(s) 171
AflIII ACRYGT 2 cut(s) 543, 810
AgsI TTSAA 6 cut(s) 100, 218, 308, 839, 854, 1277
AjnI CCWGG 1 cut(s) 553
AluBI AGCT 8 cut(s) 264, 389, 572, 616, 954, 1072, 1077, 1192
AluI AGCT 8 cut(s) 264, 389, 572, 616, 954, 1072, 1077, 1192
Alw21I GWGCWC 4 cut(s) 753, 1002, 1026, 1074
Alw26I GTCTC 2 cut(s) 855, 975
AlwI GGATC 3 cut(s) 591, 604, 813
Ama87I CYCGRG 1 cut(s) 1042
AoxI GGCC 3 cut(s) 173, 958, 1221
ApeKI GCWGC 2 cut(s) 613, 1321
ApoI RAATTY 1 cut(s) 564
ArsI GACNNNNNNTTYG 2 cut(s) 779, 811
Asp700I GAANNNNTTC 1 cut(s) 1341
AspS9I GGNCC 2 cut(s) 40, 1136
AsuC2I CCSGG 3 cut(s) 774, 866, 1250
AsuHPI GGTGA 4 cut(s) 530, 836, 1074, 1408
AvaI CYCGRG 1 cut(s) 1042
AvaII GGWCC 2 cut(s) 40, 1136
BaeGI GKGCMC 1 cut(s) 1050
BalI TGGCCA 1 cut(s) 1223
BamHI GGATCC 1 cut(s) 596
BanII GRGCYC 1 cut(s) 1074
BarI GAAGNNNNNNTAC 2 cut(s) 682, 714
BbsI GAAGAC 1 cut(s) 542
Bbv12I GWGCWC 4 cut(s) 753, 1002, 1026, 1074
BbvI GCAGC 2 cut(s) 625, 1308
BccI CCATC 2 cut(s) 169, 591
BcgI CGANNNNNNTGC 2 cut(s) 1320, 1354
BciT130I CCWGG 1 cut(s) 555
BcnI CCSGG 3 cut(s) 774, 866, 1250
BcoDI GTCTC 2 cut(s) 855, 975
BfaI CTAG 1 cut(s) 1373
BfmI CTRYAG 1 cut(s) 1322
BfuAI ACCTGC 1 cut(s) 277
BisI GCNGC 3 cut(s) 614, 1319, 1322
BlpI GCTNAGC 1 cut(s) 1073
BlsI GCNGC 3 cut(s) 615, 1320, 1323
Bme1390I CCNGG 4 cut(s) 555, 774, 866, 1250
Bme18I GGWCC 2 cut(s) 40, 1136
BmeT110I CYCGRG 1 cut(s) 1042
BmgT120I GGNCC 2 cut(s) 40, 1136
BmiI GGNNCC 3 cut(s) 598, 1116, 1138
BmrFI CCNGG 4 cut(s) 555, 774, 866, 1250
BmsI GCATC 4 cut(s) 131, 361, 673, 1274
BoxI GACNNNNGTC 1 cut(s) 1357
BpiI GAAGAC 1 cut(s) 542
BplI GAGNNNNNCTC 2 cut(s) 1061, 1093
BpmI CTGGAG 1 cut(s) 1101
Bpu1102I GCTNAGC 1 cut(s) 1073
BpuEI CTTGAG 1 cut(s) 1140
BpuMI CCSGG 3 cut(s) 774, 866, 1250
Bsa29I ATCGAT 1 cut(s) 27
BsaHI GRCGYC 1 cut(s) 1358
BsaI GGTCTC 1 cut(s) 855
BsaJI CCNNGG 3 cut(s) 176, 732, 830
BsaXI ACNNNNNCTCC 2 cut(s) 852, 882
Bsc4I CCNNNNNNNGG 1 cut(s) 171
Bse118I RCCGGY 2 cut(s) 42, 1294
Bse1I ACTGG 2 cut(s) 137, 1099
Bse3DI GCAATG 1 cut(s) 155
BseBI CCWGG 1 cut(s) 555
BseCI ATCGAT 1 cut(s) 27
BseDI CCNNGG 3 cut(s) 176, 732, 830
BseGI GGATG 3 cut(s) 146, 161, 688
BseLI CCNNNNNNNGG 1 cut(s) 171
BseMI GCAATG 1 cut(s) 155
BseMII CTCAG 3 cut(s) 879, 1080, 1087
BseNI ACTGG 2 cut(s) 137, 1099
BseSI GKGCMC 1 cut(s) 1050
BseXI GCAGC 2 cut(s) 625, 1308
BsgI GTGCAG 1 cut(s) 87
BshFI GGCC 3 cut(s) 175, 960, 1223
BshVI ATCGAT 1 cut(s) 27
BsiHKAI GWGCWC 4 cut(s) 753, 1002, 1026, 1074
BsiHKCI CYCGRG 1 cut(s) 1042
BsiSI CCGG 6 cut(s) 43, 773, 866, 1236, 1250, 1295
BslFI GGGAC 3 cut(s) 107, 1122, 1232
BslI CCNNNNNNNGG 1 cut(s) 171
BsmAI GTCTC 2 cut(s) 855, 975
BsmBI CGTCTC 1 cut(s) 975
BsmFI GGGAC 3 cut(s) 107, 1122, 1232
BsnI GGCC 3 cut(s) 175, 960, 1223
Bso31I GGTCTC 1 cut(s) 855
BsoBI CYCGRG 1 cut(s) 1042
Bsp1286I GDGCHC 5 cut(s) 753, 1002, 1026, 1050, 1074
Bsp143I GATC 4 cut(s) 520, 596, 805, 1258
Bsp1720I GCTNAGC 1 cut(s) 1073
Bsp19I CCATGG 1 cut(s) 830
BspACI CCGC 2 cut(s) 461, 1319
BspANI GGCC 3 cut(s) 175, 960, 1223
BspCNI CTCAG 3 cut(s) 880, 1079, 1086
BspDI ATCGAT 1 cut(s) 27
BspHI TCATGA 1 cut(s) 376
BspLI GGNNCC 3 cut(s) 598, 1116, 1138
BspMAI CTGCAG 1 cut(s) 1326
BspMI ACCTGC 1 cut(s) 277
BspPI GGATC 3 cut(s) 591, 604, 813
BspQI GCTCTTC 1 cut(s) 1084
BspTNI GGTCTC 1 cut(s) 855
BsrDI GCAATG 1 cut(s) 155
BsrFI RCCGGY 2 cut(s) 42, 1294
BsrI ACTGG 2 cut(s) 137, 1099
BssAI RCCGGY 2 cut(s) 42, 1294
BssECI CCNNGG 3 cut(s) 176, 732, 830
BssMI GATC 4 cut(s) 520, 596, 805, 1258
BssNI GRCGYC 1 cut(s) 1358
BssT1I CCWWGG 2 cut(s) 732, 830
Bst2UI CCWGG 1 cut(s) 555
Bst4CI ACNGT 5 cut(s) 35, 755, 1004, 1028, 1052
Bst6I CTCTTC 3 cut(s) 553, 968, 1084
BstACI GRCGYC 1 cut(s) 1358
BstC8I GCNNGC 2 cut(s) 319, 1296
BstDEI CTNAG 4 cut(s) 11, 888, 1066, 1073
BstDSI CCRYGG 1 cut(s) 830
BstF5I GGATG 3 cut(s) 146, 161, 688
BstKTI GATC 4 cut(s) 523, 599, 808, 1261
BstMAI GTCTC 2 cut(s) 855, 975
BstMBI GATC 4 cut(s) 520, 596, 805, 1258
BstNI CCWGG 1 cut(s) 555
BstNSI RCATGY 2 cut(s) 547, 814
BstPAI GACNNNNGTC 1 cut(s) 1357
BstSCI CCNGG 4 cut(s) 553, 772, 864, 1248
BstSFI CTRYAG 1 cut(s) 1322
BstSLI GKGCMC 1 cut(s) 1050
BstV1I GCAGC 2 cut(s) 625, 1308
BstV2I GAAGAC 1 cut(s) 542
BstX2I RGATCY 1 cut(s) 596
BstYI RGATCY 1 cut(s) 596
Bsu15I ATCGAT 1 cut(s) 27
BsuRI GGCC 3 cut(s) 175, 960, 1223
BsuTUI ATCGAT 1 cut(s) 27
BtgI CCRYGG 1 cut(s) 830
BtsCI GGATG 3 cut(s) 146, 161, 688
BtsI GCAGTG 1 cut(s) 924
BtsIMutI CAGTG 6 cut(s) 593, 885, 924, 1009, 1033, 1057
BveI ACCTGC 1 cut(s) 277
Cac8I GCNNGC 2 cut(s) 319, 1296
CciI TCATGA 1 cut(s) 376
Cfr10I RCCGGY 2 cut(s) 42, 1294
Cfr13I GGNCC 2 cut(s) 40, 1136
ClaI ATCGAT 1 cut(s) 27
CseI GACGC 2 cut(s) 992, 1347
Csp6I GTAC 3 cut(s) 364, 421, 467
CviAII CATG 9 cut(s) 53, 377, 544, 635, 743, 811, 831, 971, 1109
CviQI GTAC 3 cut(s) 364, 421, 467
DdeI CTNAG 4 cut(s) 11, 888, 1066, 1073
DpnI GATC 4 cut(s) 522, 598, 807, 1260
DpnII GATC 4 cut(s) 520, 596, 805, 1258
EaeI YGGCCR 1 cut(s) 1221
Eam1104I CTCTTC 3 cut(s) 553, 968, 1084
EarI CTCTTC 3 cut(s) 553, 968, 1084
Ecl136II GAGCTC 1 cut(s) 1072
Eco130I CCWWGG 2 cut(s) 732, 830
Eco24I GRGCYC 1 cut(s) 1074
Eco31I GGTCTC 1 cut(s) 855
Eco47I GGWCC 2 cut(s) 40, 1136
Eco53kI GAGCTC 1 cut(s) 1072
Eco88I CYCGRG 1 cut(s) 1042
EcoICRI GAGCTC 1 cut(s) 1072
EcoRII CCWGG 1 cut(s) 553
EcoT14I CCWWGG 2 cut(s) 732, 830
EcoT38I GRGCYC 1 cut(s) 1074
ErhI CCWWGG 2 cut(s) 732, 830
Esp3I CGTCTC 1 cut(s) 975
FaeI CATG 9 cut(s) 56, 380, 547, 638, 746, 814, 834, 974, 1112
FaqI GGGAC 3 cut(s) 107, 1122, 1232
FatI CATG 9 cut(s) 52, 376, 543, 634, 742, 810, 830, 970, 1108
FauI CCCGC 1 cut(s) 468
FauNDI CATATG 1 cut(s) 1333
Fnu4HI GCNGC 3 cut(s) 614, 1319, 1322
FokI GGATG 3 cut(s) 148, 153, 695
FriOI GRGCYC 1 cut(s) 1074
Fsp4HI GCNGC 3 cut(s) 614, 1319, 1322
FspBI CTAG 1 cut(s) 1373
GluI GCNGC 3 cut(s) 614, 1319, 1322
GsuI CTGGAG 1 cut(s) 1101
HaeIII GGCC 3 cut(s) 175, 960, 1223
HapII CCGG 6 cut(s) 43, 773, 866, 1236, 1250, 1295
HgaI GACGC 2 cut(s) 992, 1347
Hin1I GRCGYC 1 cut(s) 1358
Hin1II CATG 9 cut(s) 56, 380, 547, 638, 746, 814, 834, 974, 1112
HincII GTYRAC 2 cut(s) 284, 405
HindII GTYRAC 2 cut(s) 284, 405
HinfI GANTC 9 cut(s) 24, 58, 181, 197, 280, 430, 920, 1121, 1337
HpaII CCGG 6 cut(s) 43, 773, 866, 1236, 1250, 1295
HphI GGTGA 4 cut(s) 530, 836, 1074, 1408
Hpy166II GTNNAC 3 cut(s) 284, 405, 441
Hpy188I TCNGA 4 cut(s) 23, 112, 1069, 1315
Hpy188III TCNNGA 3 cut(s) 305, 377, 1118
Hpy8I GTNNAC 3 cut(s) 284, 405, 441
HpyAV CCTTC 4 cut(s) 224, 708, 851, 869
HpyCH4III ACNGT 5 cut(s) 35, 755, 1004, 1028, 1052
HpyF3I CTNAG 4 cut(s) 11, 888, 1066, 1073
Hsp92I GRCGYC 1 cut(s) 1358
Hsp92II CATG 9 cut(s) 56, 380, 547, 638, 746, 814, 834, 974, 1112
KroI GCCGGC 1 cut(s) 1294
KroNI GCCGGC 1 cut(s) 1296
Kzo9I GATC 4 cut(s) 520, 596, 805, 1258
LguI GCTCTTC 1 cut(s) 1084
LmnI GCTCC 5 cut(s) 461, 748, 997, 1021, 1120
Lsp1109I GCAGC 2 cut(s) 625, 1308
LweI GCATC 4 cut(s) 131, 361, 673, 1274
MaeI CTAG 1 cut(s) 1373
MaeIII GTNAC 5 cut(s) 209, 671, 892, 1090, 1414
MalI GATC 4 cut(s) 522, 598, 807, 1260
MboI GATC 4 cut(s) 520, 596, 805, 1258
MboII GAAGA 6 cut(s) 542, 570, 866, 955, 1071, 1268
MfeI CAATTG 1 cut(s) 625
MflI RGATCY 1 cut(s) 596
MhlI GDGCHC 5 cut(s) 753, 1002, 1026, 1050, 1074
MlsI TGGCCA 1 cut(s) 1223
MluCI AATT 8 cut(s) 253, 308, 336, 564, 625, 691, 849, 935
MluNI TGGCCA 1 cut(s) 1223
MlyI GAGTC 2 cut(s) 191, 289
MmeI TCCRAC 2 cut(s) 189, 783
MnlI CCTC 9 cut(s) 171, 307, 318, 540, 673, 883, 971, 1105, 1157
Mox20I TGGCCA 1 cut(s) 1223
MroNI GCCGGC 1 cut(s) 1294
MroXI GAANNNNTTC 1 cut(s) 1341
MscI TGGCCA 1 cut(s) 1223
MseI TTAA 3 cut(s) 75, 119, 602
MslI CAYNNNNRTG 1 cut(s) 516
Msp20I TGGCCA 1 cut(s) 1223
MspA1I CMGCKG 2 cut(s) 463, 1321
MspI CCGG 6 cut(s) 43, 773, 866, 1236, 1250, 1295
MspR9I CCNGG 4 cut(s) 555, 774, 866, 1250
MunI CAATTG 1 cut(s) 625
MvaI CCWGG 1 cut(s) 555
NaeI GCCGGC 1 cut(s) 1296
NciI CCSGG 3 cut(s) 774, 866, 1250
NcoI CCATGG 1 cut(s) 830
NdeI CATATG 1 cut(s) 1333
NdeII GATC 4 cut(s) 520, 596, 805, 1258
NgoMIV GCCGGC 1 cut(s) 1294
NlaIII CATG 9 cut(s) 56, 380, 547, 638, 746, 814, 834, 974, 1112
NlaIV GGNNCC 3 cut(s) 598, 1116, 1138
NmeAIII GCCGAG 1 cut(s) 201
NmuCI GTSAC 3 cut(s) 209, 892, 1414
NspI RCATGY 2 cut(s) 547, 814
PagI TCATGA 1 cut(s) 376
PciI ACATGT 2 cut(s) 543, 810
PciSI GCTCTTC 1 cut(s) 1084
PdiI GCCGGC 1 cut(s) 1296
PdmI GAANNNNTTC 1 cut(s) 1341
PfeI GAWTC 7 cut(s) 24, 58, 181, 430, 920, 1121, 1337
PflFI GACNNNGTC 1 cut(s) 866
PfoI TCCNGGA 1 cut(s) 553
PkrI GCNGC 3 cut(s) 615, 1320, 1323
PleI GAGTC 2 cut(s) 191, 288
PpsI GAGTC 2 cut(s) 191, 288
PscI ACATGT 2 cut(s) 543, 810
PshAI GACNNNNGTC 1 cut(s) 1357
Psp124BI GAGCTC 1 cut(s) 1074
Psp6I CCWGG 1 cut(s) 553
PspGI CCWGG 1 cut(s) 553
PspN4I GGNNCC 3 cut(s) 598, 1116, 1138
PspPI GGNCC 2 cut(s) 40, 1136
PstI CTGCAG 1 cut(s) 1326
PsuI RGATCY 1 cut(s) 596
PsyI GACNNNGTC 1 cut(s) 866
RsaI GTAC 3 cut(s) 365, 422, 468
RsaNI GTAC 3 cut(s) 364, 421, 467
RseI CAYNNNNRTG 1 cut(s) 516
SacI GAGCTC 1 cut(s) 1074
SapI GCTCTTC 1 cut(s) 1084
SaqAI TTAA 3 cut(s) 75, 119, 602
SatI GCNGC 3 cut(s) 614, 1319, 1322
Sau3AI GATC 4 cut(s) 520, 596, 805, 1258
Sau96I GGNCC 2 cut(s) 40, 1136
SchI GAGTC 2 cut(s) 191, 289
ScrFI CCNGG 4 cut(s) 555, 774, 866, 1250
SduI GDGCHC 5 cut(s) 753, 1002, 1026, 1050, 1074
SfaNI GCATC 4 cut(s) 131, 361, 673, 1274
SfcI CTRYAG 1 cut(s) 1322
SinI GGWCC 2 cut(s) 40, 1136
SmiMI CAYNNNNRTG 1 cut(s) 516
SmlI CTYRAG 1 cut(s) 1155
SmoI CTYRAG 1 cut(s) 1155
Sse9I AATT 8 cut(s) 253, 308, 336, 564, 625, 691, 849, 935
SsiI CCGC 2 cut(s) 461, 1319
SspI AATATT 1 cut(s) 1284
SspMI CTAG 1 cut(s) 1373
SstI GAGCTC 1 cut(s) 1074
StyD4I CCNGG 4 cut(s) 553, 772, 864, 1248
StyI CCWWGG 2 cut(s) 732, 830
TaaI ACNGT 5 cut(s) 35, 755, 1004, 1028, 1052
TaqI TCGA 2 cut(s) 27, 189
TasI AATT 8 cut(s) 253, 308, 336, 564, 625, 691, 849, 935
TatI WGTACW 1 cut(s) 363
TauI GCSGC 1 cut(s) 1321
TfiI GAWTC 7 cut(s) 24, 58, 181, 430, 920, 1121, 1337
Tru1I TTAA 3 cut(s) 75, 119, 602
Tru9I TTAA 3 cut(s) 75, 119, 602
TscAI CASTG 6 cut(s) 593, 892, 931, 1009, 1033, 1057
TseFI GTSAC 3 cut(s) 209, 892, 1414
TseI GCWGC 2 cut(s) 613, 1321
Tsp45I GTSAC 3 cut(s) 209, 892, 1414
TspDTI ATGAA 3 cut(s) 339, 888, 1350
TspGWI ACGGA 3 cut(s) 153, 1034, 1114
TspRI CASTG 6 cut(s) 593, 892, 931, 1009, 1033, 1057
Tth111I GACNNNGTC 1 cut(s) 866
VpaK11BI GGWCC 2 cut(s) 40, 1136
XapI RAATTY 1 cut(s) 564
XceI RCATGY 2 cut(s) 547, 814
XmnI GAANNNNTTC 1 cut(s) 1341
XspI CTAG 1 cut(s) 1373
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.