RESISTANCE protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 13 - 189 | 5.2e-47 | TIR domain |
| TIR_2 | PF13676 | 16 - 118 | 6.2e-15 | TIR domain |
| NB-ARC | PF00931 | 209 - 364 | 2.8e-17 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 432 - 502 | 6.2e-19 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 667 - 798 | 7.3e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 699 - 782 | 5.2e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_8 | PF13855 | 699 - 756 | 4.5e-06 | Leucine rich repeat |
| LRR_13 | PF23286 | 769 - 852 | 1.5e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 840 - 922 | 4.4e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_Zer-1 | PF25013 | 882 - 944 | 8.9e-06 | Zer-1-like, Leucine-rich repeats |
| LRR_14 | PF23598 | 904 - 1009 | 9.7e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 908 - 993 | 3e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 699, 980 |
| AccB1I | GGYRCC | 1 cut(s) | 2055 |
| AccBSI | CCGCTC | 1 cut(s) | 425 |
| AccII | CGCG | 3 cut(s) | 356, 463, 1203 |
| AciI | CCGC | 4 cut(s) | 356, 423, 1241, 1495 |
| AclI | AACGTT | 1 cut(s) | 349 |
| AclWI | GGATC | 3 cut(s) | 414, 1508, 2910 |
| AcsI | RAATTY | 7 cut(s) | 1236, 1251, 1362, 1895, 2044, 2085, 2295 |
| AcuI | CTGAAG | 2 cut(s) | 1665, 3071 |
| AdeI | CACNNNGTG | 1 cut(s) | 249 |
| AfaI | GTAC | 4 cut(s) | 306, 1715, 2971, 3123 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 617, 1247, 1394, 1864, 1882 |
| AflII | CTTAAG | 5 cut(s) | 1925, 2066, 2276, 2486, 2696 |
| AjnI | CCWGG | 6 cut(s) | 273, 1516, 1690, 1769, 2402, 3062 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1796, 1828 |
| AleI | CACNNNNGTG | 2 cut(s) | 378, 1949 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1389, 1421 |
| Alw21I | GWGCWC | 5 cut(s) | 180, 375, 1057, 1423, 1622 |
| Alw26I | GTCTC | 3 cut(s) | 1516, 2762, 2953 |
| AlwI | GGATC | 3 cut(s) | 414, 1508, 2910 |
| Ama87I | CYCGRG | 1 cut(s) | 2758 |
| ApeKI | GCWGC | 6 cut(s) | 1072, 2124, 2334, 2502, 2544, 2754 |
| ApoI | RAATTY | 7 cut(s) | 1236, 1251, 1362, 1895, 2044, 2085, 2295 |
| AseI | ATTAAT | 4 cut(s) | 2226, 2436, 2646, 2856 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 405, 792, 1551 |
| AspLEI | GCGC | 1 cut(s) | 131 |
| AspS9I | GGNCC | 1 cut(s) | 1737 |
| AsuC2I | CCSGG | 3 cut(s) | 615, 2614, 2824 |
| AsuHPI | GGTGA | 3 cut(s) | 632, 868, 1997 |
| AsuII | TTCGAA | 2 cut(s) | 1815, 1978 |
| AvaI | CYCGRG | 1 cut(s) | 2758 |
| AvaII | GGWCC | 1 cut(s) | 1737 |
| AxyI | CCTNAGG | 1 cut(s) | 1757 |
| BanI | GGYRCC | 1 cut(s) | 2055 |
| BanII | GRGCYC | 3 cut(s) | 180, 1057, 1423 |
| BauI | CACGAG | 2 cut(s) | 263, 1615 |
| BbsI | GAAGAC | 3 cut(s) | 75, 2486, 2906 |
| Bbv12I | GWGCWC | 5 cut(s) | 180, 375, 1057, 1423, 1622 |
| BbvI | GCAGC | 6 cut(s) | 1084, 2111, 2321, 2489, 2531, 2741 |
| BccI | CCATC | 6 cut(s) | 102, 689, 1274, 1392, 1807, 3029 |
| BceAI | ACGGC | 4 cut(s) | 316, 1387, 1593, 3089 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 67, 101 |
| BciT130I | CCWGG | 6 cut(s) | 275, 1518, 1692, 1771, 2404, 3064 |
| BciVI | GTATCC | 1 cut(s) | 280 |
| BcnI | CCSGG | 3 cut(s) | 615, 2614, 2824 |
| BcoDI | GTCTC | 3 cut(s) | 1516, 2762, 2953 |
| BfaI | CTAG | 5 cut(s) | 711, 987, 1286, 1313, 2888 |
| BfoI | RGCGCY | 1 cut(s) | 132 |
| BfrI | CTTAAG | 5 cut(s) | 1925, 2066, 2276, 2486, 2696 |
| BfuI | GTATCC | 1 cut(s) | 280 |
| BglII | AGATCT | 2 cut(s) | 2096, 2306 |
| BisI | GCNGC | 6 cut(s) | 1073, 2125, 2335, 2503, 2545, 2755 |
| BlpI | GCTNAGC | 1 cut(s) | 369 |
| BlsI | GCNGC | 6 cut(s) | 1074, 2126, 2336, 2504, 2546, 2756 |
| BmcAI | AGTACT | 1 cut(s) | 1715 |
| Bme1390I | CCNGG | 9 cut(s) | 275, 615, 1518, 1692, 1771, 2404, 2614, 2824, 3064 |
| Bme18I | GGWCC | 1 cut(s) | 1737 |
| BmeT110I | CYCGRG | 1 cut(s) | 2758 |
| BmgT120I | GGNCC | 1 cut(s) | 1737 |
| BmiI | GGNNCC | 3 cut(s) | 1738, 1873, 2057 |
| BmrFI | CCNGG | 9 cut(s) | 275, 615, 1518, 1692, 1771, 2404, 2614, 2824, 3064 |
| BmsI | GCATC | 4 cut(s) | 130, 1446, 1622, 2721 |
| BpiI | GAAGAC | 3 cut(s) | 75, 2486, 2906 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 409, 441 |
| BpmI | CTGGAG | 6 cut(s) | 436, 1071, 1472, 2113, 2323, 2533 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 369 |
| Bpu14I | TTCGAA | 2 cut(s) | 1815, 1978 |
| BpuMI | CCSGG | 3 cut(s) | 615, 2614, 2824 |
| BsaBI | GATNNNNATC | 2 cut(s) | 524, 530 |
| BsaJI | CCNNGG | 5 cut(s) | 28, 871, 1517, 2636, 3062 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1513, 1543 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 617, 1247, 1394, 1864, 1882 |
| Bse1I | ACTGG | 6 cut(s) | 441, 1455, 1631, 2130, 2340, 2550 |
| Bse21I | CCTNAGG | 1 cut(s) | 1757 |
| Bse8I | GATNNNNATC | 2 cut(s) | 524, 530 |
| BseBI | CCWGG | 6 cut(s) | 275, 1518, 1692, 1771, 2404, 3064 |
| BseDI | CCNNGG | 5 cut(s) | 28, 871, 1517, 2636, 3062 |
| BseGI | GGATG | 4 cut(s) | 1344, 1384, 1799, 3040 |
| BseJI | GATNNNNATC | 2 cut(s) | 524, 530 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 617, 1247, 1394, 1864, 1882 |
| BseMII | CTCAG | 8 cut(s) | 165, 166, 360, 822, 1031, 1635, 1748, 3092 |
| BseNI | ACTGG | 6 cut(s) | 441, 1455, 1631, 2130, 2340, 2550 |
| BseRI | GAGGAG | 1 cut(s) | 2183 |
| BseXI | GCAGC | 6 cut(s) | 1084, 2111, 2321, 2489, 2531, 2741 |
| BseYI | CCCAGC | 1 cut(s) | 453 |
| Bsh1236I | CGCG | 3 cut(s) | 356, 463, 1203 |
| Bsh1285I | CGRYCG | 1 cut(s) | 379 |
| BshNI | GGYRCC | 1 cut(s) | 2055 |
| BsiEI | CGRYCG | 1 cut(s) | 379 |
| BsiHKAI | GWGCWC | 5 cut(s) | 180, 375, 1057, 1423, 1622 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2758 |
| BsiSI | CCGG | 4 cut(s) | 450, 615, 2613, 2823 |
| BslFI | GGGAC | 2 cut(s) | 2286, 2926 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 617, 1247, 1394, 1864, 1882 |
| BsmAI | GTCTC | 3 cut(s) | 1516, 2762, 2953 |
| BsmBI | CGTCTC | 2 cut(s) | 1516, 2762 |
| BsmFI | GGGAC | 2 cut(s) | 2286, 2926 |
| BsmI | GAATGC | 2 cut(s) | 284, 2505 |
| BsoBI | CYCGRG | 1 cut(s) | 2758 |
| Bsp119I | TTCGAA | 2 cut(s) | 1815, 1978 |
| Bsp1286I | GDGCHC | 5 cut(s) | 180, 375, 1057, 1423, 1622 |
| Bsp1407I | TGTACA | 2 cut(s) | 2969, 3121 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 369 |
| Bsp68I | TCGCGA | 1 cut(s) | 463 |
| BspACI | CCGC | 4 cut(s) | 356, 423, 1241, 1495 |
| BspCNI | CTCAG | 8 cut(s) | 165, 166, 361, 821, 1032, 1634, 1749, 3093 |
| BspFNI | CGCG | 3 cut(s) | 356, 463, 1203 |
| BspHI | TCATGA | 2 cut(s) | 759, 1255 |
| BspLI | GGNNCC | 3 cut(s) | 1738, 1873, 2057 |
| BspPI | GGATC | 3 cut(s) | 414, 1508, 2910 |
| BspQI | GCTCTTC | 4 cut(s) | 936, 2172, 2382, 2592 |
| BspT104I | TTCGAA | 2 cut(s) | 1815, 1978 |
| BspT107I | GGYRCC | 1 cut(s) | 2055 |
| BspTI | CTTAAG | 5 cut(s) | 1925, 2066, 2276, 2486, 2696 |
| BsrBI | CCGCTC | 1 cut(s) | 425 |
| BsrGI | TGTACA | 2 cut(s) | 2969, 3121 |
| BsrI | ACTGG | 6 cut(s) | 441, 1455, 1631, 2130, 2340, 2550 |
| BssECI | CCNNGG | 5 cut(s) | 28, 871, 1517, 2636, 3062 |
| BssSI | CACGAG | 2 cut(s) | 263, 1615 |
| BssT1I | CCWWGG | 3 cut(s) | 28, 871, 2636 |
| Bst2BI | CACGAG | 2 cut(s) | 263, 1615 |
| Bst2UI | CCWGG | 6 cut(s) | 275, 1518, 1692, 1771, 2404, 3064 |
| Bst4CI | ACNGT | 1 cut(s) | 2966 |
| Bst6I | CTCTTC | 5 cut(s) | 501, 936, 2172, 2382, 2592 |
| BstAFI | CTTAAG | 5 cut(s) | 1925, 2066, 2276, 2486, 2696 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 592 |
| BstAUI | TGTACA | 2 cut(s) | 2969, 3121 |
| BstBI | TTCGAA | 2 cut(s) | 1815, 1978 |
| BstC8I | GCNNGC | 3 cut(s) | 25, 1077, 3154 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 615, 1392 |
| BstF5I | GGATG | 4 cut(s) | 1344, 1384, 1799, 3040 |
| BstFNI | CGCG | 3 cut(s) | 356, 463, 1203 |
| BstH2I | RGCGCY | 1 cut(s) | 132 |
| BstHHI | GCGC | 1 cut(s) | 131 |
| BstMAI | GTCTC | 3 cut(s) | 1516, 2762, 2953 |
| BstMCI | CGRYCG | 1 cut(s) | 379 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 90, 175, 592, 3082 |
| BstNI | CCWGG | 6 cut(s) | 275, 1518, 1692, 1771, 2404, 3064 |
| BstNSI | RCATGY | 3 cut(s) | 586, 1326, 1840 |
| BstSCI | CCNGG | 9 cut(s) | 273, 613, 1516, 1690, 1769, 2402, 2612, 2822, 3062 |
| BstUI | CGCG | 3 cut(s) | 356, 463, 1203 |
| BstV1I | GCAGC | 6 cut(s) | 1084, 2111, 2321, 2489, 2531, 2741 |
| BstV2I | GAAGAC | 3 cut(s) | 75, 2486, 2906 |
| BstX2I | RGATCY | 5 cut(s) | 419, 1513, 2096, 2306, 2902 |
| BstYI | RGATCY | 5 cut(s) | 419, 1513, 2096, 2306, 2902 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1757 |
| BsuI | GTATCC | 1 cut(s) | 280 |
| BtgZI | GCGATG | 1 cut(s) | 1645 |
| BtsCI | GGATG | 4 cut(s) | 1344, 1384, 1799, 3040 |
| BtuMI | TCGCGA | 1 cut(s) | 463 |
| Cac8I | GCNNGC | 3 cut(s) | 25, 1077, 3154 |
| CciI | TCATGA | 2 cut(s) | 759, 1255 |
| CfoI | GCGC | 1 cut(s) | 131 |
| Cfr13I | GGNCC | 1 cut(s) | 1737 |
| Csp6I | GTAC | 4 cut(s) | 305, 1714, 2970, 3122 |
| CviQI | GTAC | 4 cut(s) | 305, 1714, 2970, 3122 |
| DraI | TTTAAA | 1 cut(s) | 1705 |
| DraIII | CACNNNGTG | 1 cut(s) | 249 |
| Eam1104I | CTCTTC | 5 cut(s) | 501, 936, 2172, 2382, 2592 |
| EarI | CTCTTC | 5 cut(s) | 501, 936, 2172, 2382, 2592 |
| EciI | GGCGGA | 1 cut(s) | 1484 |
| Ecl136II | GAGCTC | 3 cut(s) | 178, 1055, 1421 |
| Eco130I | CCWWGG | 3 cut(s) | 28, 871, 2636 |
| Eco24I | GRGCYC | 3 cut(s) | 180, 1057, 1423 |
| Eco47I | GGWCC | 1 cut(s) | 1737 |
| Eco53kI | GAGCTC | 3 cut(s) | 178, 1055, 1421 |
| Eco57I | CTGAAG | 2 cut(s) | 1665, 3071 |
| Eco81I | CCTNAGG | 1 cut(s) | 1757 |
| Eco88I | CYCGRG | 1 cut(s) | 2758 |
| EcoICRI | GAGCTC | 3 cut(s) | 178, 1055, 1421 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 615, 1392 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1737 |
| EcoRI | GAATTC | 1 cut(s) | 1251 |
| EcoRII | CCWGG | 6 cut(s) | 273, 1516, 1690, 1769, 2402, 3062 |
| EcoT14I | CCWWGG | 3 cut(s) | 28, 871, 2636 |
| EcoT22I | ATGCAT | 2 cut(s) | 588, 1461 |
| EcoT38I | GRGCYC | 3 cut(s) | 180, 1057, 1423 |
| ErhI | CCWWGG | 3 cut(s) | 28, 871, 2636 |
| Esp3I | CGTCTC | 2 cut(s) | 1516, 2762 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 921, 953, 1292, 1324 |
| FaqI | GGGAC | 2 cut(s) | 2286, 2926 |
| FauNDI | CATATG | 3 cut(s) | 780, 2511, 2721 |
| Fnu4HI | GCNGC | 6 cut(s) | 1073, 2125, 2335, 2503, 2545, 2755 |
| FokI | GGATG | 4 cut(s) | 1351, 1371, 1786, 3047 |
| FriOI | GRGCYC | 3 cut(s) | 180, 1057, 1423 |
| Fsp4HI | GCNGC | 6 cut(s) | 1073, 2125, 2335, 2503, 2545, 2755 |
| FspBI | CTAG | 5 cut(s) | 711, 987, 1286, 1313, 2888 |
| GlaI | GCGC | 1 cut(s) | 130 |
| GluI | GCNGC | 6 cut(s) | 1073, 2125, 2335, 2503, 2545, 2755 |
| GsaI | CCCAGC | 1 cut(s) | 457 |
| GsuI | CTGGAG | 6 cut(s) | 436, 1071, 1472, 2113, 2323, 2533 |
| HaeII | RGCGCY | 1 cut(s) | 132 |
| HapII | CCGG | 4 cut(s) | 450, 615, 2613, 2823 |
| HhaI | GCGC | 1 cut(s) | 131 |
| Hin6I | GCGC | 1 cut(s) | 129 |
| HinP1I | GCGC | 1 cut(s) | 129 |
| HincII | GTYRAC | 2 cut(s) | 347, 568 |
| HindII | GTYRAC | 2 cut(s) | 347, 568 |
| HindIII | AAGCTT | 6 cut(s) | 360, 723, 930, 1273, 1647, 3115 |
| HpaII | CCGG | 4 cut(s) | 450, 615, 2613, 2823 |
| HphI | GGTGA | 3 cut(s) | 632, 868, 1997 |
| Hpy166II | GTNNAC | 4 cut(s) | 347, 568, 2005, 2972 |
| Hpy8I | GTNNAC | 4 cut(s) | 347, 568, 2005, 2972 |
| HpyCH4III | ACNGT | 1 cut(s) | 2966 |
| HpyCH4IV | ACGT | 3 cut(s) | 324, 349, 2771 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 90, 175, 592, 3082 |
| HpySE526I | ACGT | 3 cut(s) | 324, 349, 2771 |
| HspAI | GCGC | 1 cut(s) | 129 |
| LguI | GCTCTTC | 4 cut(s) | 936, 2172, 2382, 2592 |
| LmnI | GCTCC | 7 cut(s) | 183, 411, 1052, 1175, 2132, 2342, 2552 |
| Lsp1109I | GCAGC | 6 cut(s) | 1084, 2111, 2321, 2489, 2531, 2741 |
| LweI | GCATC | 4 cut(s) | 130, 1446, 1622, 2721 |
| MaeI | CTAG | 5 cut(s) | 711, 987, 1286, 1313, 2888 |
| MaeII | ACGT | 3 cut(s) | 324, 349, 2771 |
| MbiI | CCGCTC | 1 cut(s) | 425 |
| MfeI | CAATTG | 1 cut(s) | 1590 |
| MflI | RGATCY | 5 cut(s) | 419, 1513, 2096, 2306, 2902 |
| MhlI | GDGCHC | 5 cut(s) | 180, 375, 1057, 1423, 1622 |
| MlyI | GAGTC | 9 cut(s) | 206, 1657, 2014, 2254, 2464, 2500, 2710, 2770, 2920 |
| MmeI | TCCRAC | 3 cut(s) | 14, 625, 1827 |
| Mph1103I | ATGCAT | 2 cut(s) | 588, 1461 |
| MroXI | GAANNNNTTC | 3 cut(s) | 405, 792, 1551 |
| MslI | CAYNNNNRTG | 7 cut(s) | 378, 585, 1604, 1949, 2510, 2720, 2870 |
| MspCI | CTTAAG | 5 cut(s) | 1925, 2066, 2276, 2486, 2696 |
| MspI | CCGG | 4 cut(s) | 450, 615, 2613, 2823 |
| MspR9I | CCNGG | 9 cut(s) | 275, 615, 1518, 1692, 1771, 2404, 2614, 2824, 3064 |
| MunI | CAATTG | 1 cut(s) | 1590 |
| Mva1269I | GAATGC | 2 cut(s) | 284, 2505 |
| MvaI | CCWGG | 6 cut(s) | 275, 1518, 1692, 1771, 2404, 3064 |
| MvnI | CGCG | 3 cut(s) | 356, 463, 1203 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 90, 175, 592, 3082 |
| NciI | CCSGG | 3 cut(s) | 615, 2614, 2824 |
| NdeI | CATATG | 3 cut(s) | 780, 2511, 2721 |
| NlaIV | GGNNCC | 3 cut(s) | 1738, 1873, 2057 |
| NmeAIII | GCCGAG | 1 cut(s) | 169 |
| NruI | TCGCGA | 1 cut(s) | 463 |
| NsiI | ATGCAT | 2 cut(s) | 588, 1461 |
| NspI | RCATGY | 3 cut(s) | 586, 1326, 1840 |
| NspV | TTCGAA | 2 cut(s) | 1815, 1978 |
| OliI | CACNNNNGTG | 2 cut(s) | 378, 1949 |
| PacI | TTAATTAA | 1 cut(s) | 2856 |
| PaeR7I | CTCGAG | 1 cut(s) | 2758 |
| PagI | TCATGA | 2 cut(s) | 759, 1255 |
| PciSI | GCTCTTC | 4 cut(s) | 936, 2172, 2382, 2592 |
| PctI | GAATGC | 2 cut(s) | 284, 2505 |
| PdmI | GAANNNNTTC | 3 cut(s) | 405, 792, 1551 |
| PfoI | TCCNGGA | 2 cut(s) | 273, 613 |
| PkrI | GCNGC | 6 cut(s) | 1074, 2126, 2336, 2504, 2546, 2756 |
| Ple19I | CGATCG | 1 cut(s) | 379 |
| PleI | GAGTC | 9 cut(s) | 205, 1657, 2014, 2253, 2463, 2499, 2709, 2769, 2919 |
| PpsI | GAGTC | 9 cut(s) | 205, 1657, 2014, 2253, 2463, 2499, 2709, 2769, 2919 |
| PpuMI | RGGWCCY | 1 cut(s) | 1737 |
| PshBI | ATTAAT | 4 cut(s) | 2226, 2436, 2646, 2856 |
| PsiI | TTATAA | 2 cut(s) | 699, 980 |
| Psp124BI | GAGCTC | 3 cut(s) | 180, 1057, 1423 |
| Psp1406I | AACGTT | 1 cut(s) | 349 |
| Psp5II | RGGWCCY | 1 cut(s) | 1737 |
| Psp6I | CCWGG | 6 cut(s) | 273, 1516, 1690, 1769, 2402, 3062 |
| PspFI | CCCAGC | 1 cut(s) | 453 |
| PspGI | CCWGG | 6 cut(s) | 273, 1516, 1690, 1769, 2402, 3062 |
| PspN4I | GGNNCC | 3 cut(s) | 1738, 1873, 2057 |
| PspPI | GGNCC | 1 cut(s) | 1737 |
| PspPPI | RGGWCCY | 1 cut(s) | 1737 |
| PspXI | VCTCGAGB | 1 cut(s) | 2758 |
| PsuI | RGATCY | 5 cut(s) | 419, 1513, 2096, 2306, 2902 |
| PvuI | CGATCG | 1 cut(s) | 379 |
| RruI | TCGCGA | 1 cut(s) | 463 |
| RsaI | GTAC | 4 cut(s) | 306, 1715, 2971, 3123 |
| RsaNI | GTAC | 4 cut(s) | 305, 1714, 2970, 3122 |
| RseI | CAYNNNNRTG | 7 cut(s) | 378, 585, 1604, 1949, 2510, 2720, 2870 |
| SacI | GAGCTC | 3 cut(s) | 180, 1057, 1423 |
| SapI | GCTCTTC | 4 cut(s) | 936, 2172, 2382, 2592 |
| SatI | GCNGC | 6 cut(s) | 1073, 2125, 2335, 2503, 2545, 2755 |
| Sau96I | GGNCC | 1 cut(s) | 1737 |
| ScaI | AGTACT | 1 cut(s) | 1715 |
| SchI | GAGTC | 9 cut(s) | 206, 1657, 2014, 2254, 2464, 2500, 2710, 2770, 2920 |
| ScrFI | CCNGG | 9 cut(s) | 275, 615, 1518, 1692, 1771, 2404, 2614, 2824, 3064 |
| SduI | GDGCHC | 5 cut(s) | 180, 375, 1057, 1423, 1622 |
| SfaNI | GCATC | 4 cut(s) | 130, 1446, 1622, 2721 |
| Sfr274I | CTCGAG | 1 cut(s) | 2758 |
| SfuI | TTCGAA | 2 cut(s) | 1815, 1978 |
| SinI | GGWCC | 1 cut(s) | 1737 |
| SlaI | CTCGAG | 1 cut(s) | 2758 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 378, 585, 1604, 1949, 2510, 2720, 2870 |
| SsiI | CCGC | 4 cut(s) | 356, 423, 1241, 1495 |
| SspMI | CTAG | 5 cut(s) | 711, 987, 1286, 1313, 2888 |
| SstI | GAGCTC | 3 cut(s) | 180, 1057, 1423 |
| StyD4I | CCNGG | 9 cut(s) | 273, 613, 1516, 1690, 1769, 2402, 2612, 2822, 3062 |
| StyI | CCWWGG | 3 cut(s) | 28, 871, 2636 |
| TaaI | ACNGT | 1 cut(s) | 2966 |
| TaiI | ACGT | 3 cut(s) | 327, 352, 2774 |
| TaqII | GACCGA | 1 cut(s) | 1872 |
| TatI | WGTACW | 4 cut(s) | 304, 1713, 2969, 3121 |
| TseI | GCWGC | 6 cut(s) | 1072, 2124, 2334, 2502, 2544, 2754 |
| Vha464I | CTTAAG | 5 cut(s) | 1925, 2066, 2276, 2486, 2696 |
| VpaK11BI | GGWCC | 1 cut(s) | 1737 |
| VspI | ATTAAT | 4 cut(s) | 2226, 2436, 2646, 2856 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 615, 1392 |
| XapI | RAATTY | 7 cut(s) | 1236, 1251, 1362, 1895, 2044, 2085, 2295 |
| XbaI | TCTAGA | 1 cut(s) | 1312 |
| XceI | RCATGY | 3 cut(s) | 586, 1326, 1840 |
| XhoI | CTCGAG | 1 cut(s) | 2758 |
| XmnI | GAANNNNTTC | 3 cut(s) | 405, 792, 1551 |
| XspI | CTAG | 5 cut(s) | 711, 987, 1286, 1313, 2888 |
| ZrmI | AGTACT | 1 cut(s) | 1715 |
| Zsp2I | ATGCAT | 2 cut(s) | 588, 1461 |